RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 CCT4P50991 539 aaKnown RBP22.36■■□□□ 1.17
RAPGEF3-220ENST00000549347 DDX46Q7L014 1031 aaKnown RBP22.36■■□□□ 1.17
RAPGEF3-220ENST00000549347 C7orf43Q8WVR3 580 aa22.36■■□□□ 1.17
RAPGEF3-220ENST00000549347 RTL9Q8NET4 1388 aa22.36■■□□□ 1.17
RAPGEF3-220ENST00000549347 SBF1O95248 1867 aa22.35■■□□□ 1.17
RAPGEF3-220ENST00000549347 C21orf2O43822 256 aa22.35■■□□□ 1.17
RAPGEF3-220ENST00000549347 GRAPQ13588 217 aa22.35■■□□□ 1.17
RAPGEF3-220ENST00000549347 CCDC152Q4G0S7 254 aa22.35■■□□□ 1.17
RAPGEF3-220ENST00000549347 SOGA3Q5TF21 947 aa22.35■■□□□ 1.17
RAPGEF3-220ENST00000549347 ZKSCAN2Q63HK3 967 aa22.35■■□□□ 1.17
RAPGEF3-220ENST00000549347 GRAPLQ8TC17 118 aaPredicted RBP22.35■■□□□ 1.17
RAPGEF3-220ENST00000549347 FRAT1Q92837 279 aaPredicted RBP22.35■■□□□ 1.17
RAPGEF3-220ENST00000549347 C9orf78Q9NZ63 289 aaPredicted RBP22.35■■□□□ 1.17
RAPGEF3-220ENST00000549347 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
RAPGEF3-220ENST00000549347 SPEF2Q9C093 1822 aa22.34■■□□□ 1.17
RAPGEF3-220ENST00000549347 PPEF1O14829 653 aaPredicted RBP22.33■■□□□ 1.17
RAPGEF3-220ENST00000549347 TTLL11Q8NHH1 800 aa22.33■■□□□ 1.17
RAPGEF3-220ENST00000549347 NBPF7P0C2Y1 421 aaPredicted RBP22.32■■□□□ 1.16
RAPGEF3-220ENST00000549347 CCDC93Q567U6 631 aa22.32■■□□□ 1.16
RAPGEF3-220ENST00000549347 INTS3Q68E01 1043 aaKnown RBP22.32■■□□□ 1.16
RAPGEF3-220ENST00000549347 ARHGAP27Q6ZUM4 889 aa22.32■■□□□ 1.16
RAPGEF3-220ENST00000549347 TNNQ9UQP3 1299 aa22.32■■□□□ 1.16
RAPGEF3-220ENST00000549347 BBOX1O75936 387 aa22.31■■□□□ 1.16
RAPGEF3-220ENST00000549347 USP44Q9H0E7 712 aa22.31■■□□□ 1.16
RAPGEF3-220ENST00000549347 ZNF219Q9P2Y4 722 aaPredicted RBP22.31■■□□□ 1.16
RAPGEF3-220ENST00000549347 LTBP1Q14766 1721 aa22.31■■□□□ 1.16
RAPGEF3-220ENST00000549347 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
RAPGEF3-220ENST00000549347 CCDC88AQ3V6T2 1871 aa22.3■■□□□ 1.16
RAPGEF3-220ENST00000549347 NFKBIEO00221 500 aa22.3■■□□□ 1.16
RAPGEF3-220ENST00000549347 CSF1RP07333 972 aa22.3■■□□□ 1.16
RAPGEF3-220ENST00000549347 FOXO4P98177 505 aa22.3■■□□□ 1.16
RAPGEF3-220ENST00000549347 CC2D2BQ6DHV5 1058 aa22.3■■□□□ 1.16
RAPGEF3-220ENST00000549347 TMC4Q7Z404 712 aa22.3■■□□□ 1.16
RAPGEF3-220ENST00000549347 CELF1Q92879 486 aaKnown RBP22.3■■□□□ 1.16
RAPGEF3-220ENST00000549347 ATP6V0A2Q9Y487 856 aa22.3■■□□□ 1.16
RAPGEF3-220ENST00000549347 TIAM2Q8IVF5 1701 aa22.3■■□□□ 1.16
RAPGEF3-220ENST00000549347 DICER1Q9UPY3 1922 aaKnown RBP22.29■■□□□ 1.16
RAPGEF3-220ENST00000549347 SUCLG2Q96I99 432 aa22.29■■□□□ 1.16
RAPGEF3-220ENST00000549347 GREM2Q9H772 168 aa22.29■■□□□ 1.16
RAPGEF3-220ENST00000549347 SEC31BQ9NQW1 1179 aa22.29■■□□□ 1.16
RAPGEF3-220ENST00000549347 RASSF7Q02833 373 aa22.28■■□□□ 1.16
RAPGEF3-220ENST00000549347 OLFM4Q6UX06 510 aa22.28■■□□□ 1.16
RAPGEF3-220ENST00000549347 CLUAP1Q96AJ1 413 aa22.28■■□□□ 1.16
RAPGEF3-220ENST00000549347 KAZALD1Q96I82 304 aa22.28■■□□□ 1.16
RAPGEF3-220ENST00000549347 CCDC85AQ96PX6 553 aaPredicted RBP22.28■■□□□ 1.16
RAPGEF3-220ENST00000549347 DUOX1Q9NRD9 1551 aa22.28■■□□□ 1.16
RAPGEF3-220ENST00000549347 FAM161AQ3B820 660 aa22.27■■□□□ 1.16
RAPGEF3-220ENST00000549347 GRIPAP1Q4V328 841 aa22.27■■□□□ 1.16
RAPGEF3-220ENST00000549347 EPHA10Q5JZY3 1008 aa22.27■■□□□ 1.16
RAPGEF3-220ENST00000549347 SLC51AQ86UW1 340 aa22.27■■□□□ 1.16
RAPGEF3-220ENST00000549347 RTKN2Q8IZC4 609 aa22.27■■□□□ 1.16
RAPGEF3-220ENST00000549347 A0A1B0GUL6 1792 aa22.26■■□□□ 1.15
RAPGEF3-220ENST00000549347 RPS8P62241 208 aaKnown RBP22.26■■□□□ 1.15
RAPGEF3-220ENST00000549347 SP8Q8IXZ3 490 aa22.26■■□□□ 1.15
RAPGEF3-220ENST00000549347 DZIP1LQ8IYY4 767 aaKnown RBP22.26■■□□□ 1.15
RAPGEF3-220ENST00000549347 CDC5LQ99459 802 aaKnown RBP22.26■■□□□ 1.15
RAPGEF3-220ENST00000549347 TAOK3Q9H2K8 898 aa22.26■■□□□ 1.15
RAPGEF3-220ENST00000549347 FKBP4Q02790 459 aaKnown RBP eCLIP22.25■■□□□ 1.15
RAPGEF3-220ENST00000549347 RABL6Q3YEC7 729 aaPredicted RBP22.25■■□□□ 1.15
RAPGEF3-220ENST00000549347 FTSJ3Q8IY81 847 aaKnown RBP22.25■■□□□ 1.15
RAPGEF3-220ENST00000549347 TMEM57Q8N5G2 664 aa22.25■■□□□ 1.15
RAPGEF3-220ENST00000549347 RLBP1P12271 317 aa22.24■■□□□ 1.15
RAPGEF3-220ENST00000549347 ITGA6P23229 1130 aa22.24■■□□□ 1.15
RAPGEF3-220ENST00000549347 PRELPP51888 382 aa22.24■■□□□ 1.15
RAPGEF3-220ENST00000549347 LMBR1LQ6UX01 489 aa22.24■■□□□ 1.15
RAPGEF3-220ENST00000549347 ANKRD18AQ8IVF6 992 aa22.24■■□□□ 1.15
RAPGEF3-220ENST00000549347 PSMD1Q99460 953 aa22.24■■□□□ 1.15
RAPGEF3-220ENST00000549347 MEIS3Q99687 375 aa22.24■■□□□ 1.15
RAPGEF3-220ENST00000549347 BICC1Q9H694 974 aaKnown RBP22.24■■□□□ 1.15
RAPGEF3-220ENST00000549347 UBTFL1P0CB47 393 aaPredicted RBP22.23■■□□□ 1.15
RAPGEF3-220ENST00000549347 LMNB1P20700 586 aa22.23■■□□□ 1.15
RAPGEF3-220ENST00000549347 ANKRD44Q8N8A2 993 aa22.23■■□□□ 1.15
RAPGEF3-220ENST00000549347 TMX4Q9H1E5 349 aaPredicted RBP22.23■■□□□ 1.15
RAPGEF3-220ENST00000549347 ANKRD18BA2A2Z9 1011 aa22.21■■□□□ 1.15
RAPGEF3-220ENST00000549347 GNAI3P08754 354 aa22.21■■□□□ 1.15
RAPGEF3-220ENST00000549347 MS4A1P11836 297 aa22.21■■□□□ 1.15
RAPGEF3-220ENST00000549347 IFIT5Q13325 482 aaKnown RBP22.21■■□□□ 1.15
RAPGEF3-220ENST00000549347 HDAC5Q9UQL6 1122 aa22.21■■□□□ 1.15
RAPGEF3-220ENST00000549347 CHMP3Q9Y3E7 222 aa22.21■■□□□ 1.15
RAPGEF3-220ENST00000549347 C9orf131Q5VYM1 1079 aa22.2■■□□□ 1.14
RAPGEF3-220ENST00000549347 RTFDC1Q9BY42 306 aaPredicted RBP22.2■■□□□ 1.14
RAPGEF3-220ENST00000549347 BSDC1Q9NW68 430 aaPredicted RBP22.2■■□□□ 1.14
RAPGEF3-220ENST00000549347 RNF181Q9P0P0 153 aa22.2■■□□□ 1.14
RAPGEF3-220ENST00000549347 YY1P25490 414 aa22.19■■□□□ 1.14
RAPGEF3-220ENST00000549347 IGHMBP2P38935 993 aaKnown RBP22.19■■□□□ 1.14
RAPGEF3-220ENST00000549347 CCDC57Q2TAC2 916 aa22.19■■□□□ 1.14
RAPGEF3-220ENST00000549347 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.19■■□□□ 1.14
RAPGEF3-220ENST00000549347 ZC3H4Q9UPT8 1303 aaKnown RBP22.19■■□□□ 1.14
RAPGEF3-220ENST00000549347 DPP8Q6V1X1 898 aaPredicted RBP22.18■■□□□ 1.14
RAPGEF3-220ENST00000549347 ITPRIPQ8IWB1 547 aa22.18■■□□□ 1.14
RAPGEF3-220ENST00000549347 MPNDQ8N594 471 aa22.18■■□□□ 1.14
RAPGEF3-220ENST00000549347 PANK1Q8TE04 598 aa22.18■■□□□ 1.14
RAPGEF3-220ENST00000549347 COL4A5P29400 1685 aa22.17■■□□□ 1.14
RAPGEF3-220ENST00000549347 PLIN1O60240 522 aa22.17■■□□□ 1.14
RAPGEF3-220ENST00000549347 SUPT20HQ8NEM7 779 aa22.17■■□□□ 1.14
RAPGEF3-220ENST00000549347 ZNF277Q9NRM2 450 aaPredicted RBP22.17■■□□□ 1.14
RAPGEF3-220ENST00000549347 PODXL2Q9NZ53 605 aa22.17■■□□□ 1.14
RAPGEF3-220ENST00000549347 LRRFIP2Q9Y608 721 aaKnown RBP22.17■■□□□ 1.14
RAPGEF3-220ENST00000549347 IARSP41252 1262 aaKnown RBP22.16■■□□□ 1.14
RAPGEF3-220ENST00000549347 GPSM2P81274 684 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms