RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 BLOC1S2Q6QNY1 142 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 PGBD1Q96JS3 809 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 MST1RQ04912 1400 aa16.23■□□□□ 0.19
HDAC7-228ENST00000548938 A0A0D9SFI3 127 aa16.23■□□□□ 0.19
HDAC7-228ENST00000548938 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.23■□□□□ 0.19
HDAC7-228ENST00000548938 BICD2Q8TD16 824 aa16.23■□□□□ 0.19
HDAC7-228ENST00000548938 FEZ1Q99689 392 aa16.23■□□□□ 0.19
HDAC7-228ENST00000548938 CLIP2Q9UDT6 1046 aa16.23■□□□□ 0.19
HDAC7-228ENST00000548938 PSMA5P28066 241 aa16.23■□□□□ 0.19
HDAC7-228ENST00000548938 PDE4CQ08493 712 aa16.23■□□□□ 0.19
HDAC7-228ENST00000548938 TOB2Q14106 344 aaPredicted RBP16.23■□□□□ 0.19
HDAC7-228ENST00000548938 CTNNA3Q9UI47 895 aa16.23■□□□□ 0.19
HDAC7-228ENST00000548938 CEMIPQ8WUJ3 1361 aa16.22■□□□□ 0.19
HDAC7-228ENST00000548938 LGR6Q9HBX8 967 aa16.22■□□□□ 0.19
HDAC7-228ENST00000548938 RPS6KB1P23443 525 aa16.22■□□□□ 0.19
HDAC7-228ENST00000548938 SYCP1Q15431 976 aa16.22■□□□□ 0.19
HDAC7-228ENST00000548938 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
HDAC7-228ENST00000548938 DCCP43146 1447 aa16.21■□□□□ 0.19
HDAC7-228ENST00000548938 PDIA4P13667 645 aaKnown RBP16.21■□□□□ 0.19
HDAC7-228ENST00000548938 TPD52L1Q16890 204 aaPredicted RBP16.21■□□□□ 0.19
HDAC7-228ENST00000548938 CCDC112Q8NEF3 446 aa16.21■□□□□ 0.19
HDAC7-228ENST00000548938 DDX17Q92841 729 aaKnown RBP16.21■□□□□ 0.19
HDAC7-228ENST00000548938 TLR7Q9NYK1 1049 aaKnown RBP16.21■□□□□ 0.19
HDAC7-228ENST00000548938 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
HDAC7-228ENST00000548938 OGFRQ9NZT2 677 aa16.21■□□□□ 0.19
HDAC7-228ENST00000548938 LTN1O94822 1766 aa16.21■□□□□ 0.19
HDAC7-228ENST00000548938 JAK2O60674 1132 aa16.21■□□□□ 0.19
HDAC7-228ENST00000548938 ERC1Q8IUD2 1116 aa16.21■□□□□ 0.19
HDAC7-228ENST00000548938 CCDC8Q9H0W5 538 aaPredicted RBP16.21■□□□□ 0.19
HDAC7-228ENST00000548938 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
HDAC7-228ENST00000548938 ARHGEF25Q86VW2 580 aa16.2■□□□□ 0.18
HDAC7-228ENST00000548938 EAF2Q96CJ1 260 aaPredicted RBP16.2■□□□□ 0.18
HDAC7-228ENST00000548938 ARID5BQ14865 1188 aa16.2■□□□□ 0.18
HDAC7-228ENST00000548938 CWF19L2Q2TBE0 894 aaKnown RBP16.2■□□□□ 0.18
HDAC7-228ENST00000548938 CADPS2Q86UW7 1296 aa16.2■□□□□ 0.18
HDAC7-228ENST00000548938 ZNF592Q92610 1267 aa16.2■□□□□ 0.18
HDAC7-228ENST00000548938 FSD1Q9BTV5 496 aa16.2■□□□□ 0.18
HDAC7-228ENST00000548938 TRPM3Q9HCF6 1732 aaPredicted RBP16.2■□□□□ 0.18
HDAC7-228ENST00000548938 KIF1AQ12756 1690 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 SASH1O94885 1247 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 HOXB7P09629 217 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 ZNF589Q86UQ0 364 aaPredicted RBP16.19■□□□□ 0.18
HDAC7-228ENST00000548938 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 PAXBP1Q9Y5B6 917 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 HIP1O00291 1037 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 RNF20Q5VTR2 975 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 NBPF6Q5VWK0 638 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 DDX11Q96FC9 970 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 NBPF4Q96M43 638 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 BOLA2Q9H3K6 86 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 SNRKQ9NRH2 765 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 MED1Q15648 1581 aaPredicted RBP16.19■□□□□ 0.18
HDAC7-228ENST00000548938 MED23Q9ULK4 1368 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 SLIT3O75094 1523 aa16.19■□□□□ 0.18
HDAC7-228ENST00000548938 A0A0U1RQG5 324 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-228ENST00000548938 USP27XA6NNY8 438 aa16.18■□□□□ 0.18
HDAC7-228ENST00000548938 RESTQ13127 1097 aa16.18■□□□□ 0.18
HDAC7-228ENST00000548938 PROSER3Q2NL68 480 aa16.18■□□□□ 0.18
HDAC7-228ENST00000548938 CEP135Q66GS9 1140 aa16.18■□□□□ 0.18
HDAC7-228ENST00000548938 C11orf57Q6ZUT1 292 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-228ENST00000548938 BRF1Q92994 677 aa16.18■□□□□ 0.18
HDAC7-228ENST00000548938 CGNQ9P2M7 1197 aaKnown RBP16.18■□□□□ 0.18
HDAC7-228ENST00000548938 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-228ENST00000548938 DDX41Q9UJV9 622 aaKnown RBP16.18■□□□□ 0.18
HDAC7-228ENST00000548938 CDC25BP30305 580 aa16.17■□□□□ 0.18
HDAC7-228ENST00000548938 IQCB1Q15051 598 aa16.17■□□□□ 0.18
HDAC7-228ENST00000548938 KDM3BQ7LBC6 1761 aa16.17■□□□□ 0.18
HDAC7-228ENST00000548938 STRCQ7RTU9 1775 aa16.17■□□□□ 0.18
HDAC7-228ENST00000548938 LRRC8AQ8IWT6 810 aa16.17■□□□□ 0.18
HDAC7-228ENST00000548938 ALDH8A1Q9H2A2 487 aaPredicted RBP16.17■□□□□ 0.18
HDAC7-228ENST00000548938 ALDH1L1O75891 902 aa16.16■□□□□ 0.18
HDAC7-228ENST00000548938 CEBPZQ03701 1054 aaKnown RBP16.16■□□□□ 0.18
HDAC7-228ENST00000548938 GTF3C6Q969F1 213 aa16.16■□□□□ 0.18
HDAC7-228ENST00000548938 LRRC59Q96AG4 307 aaKnown RBP16.16■□□□□ 0.18
HDAC7-228ENST00000548938 SUCLG2Q96I99 432 aa16.16■□□□□ 0.18
HDAC7-228ENST00000548938 SIL1Q9H173 461 aa16.16■□□□□ 0.18
HDAC7-228ENST00000548938 GOLGA6L19H0YKK7 550 aa16.16■□□□□ 0.18
HDAC7-228ENST00000548938 ZNF771Q7L3S4 317 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-228ENST00000548938 EDC3Q96F86 508 aaKnown RBP16.16■□□□□ 0.18
HDAC7-228ENST00000548938 KAZALD1Q96I82 304 aa16.16■□□□□ 0.18
HDAC7-228ENST00000548938 PHRF1Q9P1Y6 1649 aaKnown RBP16.15■□□□□ 0.18
HDAC7-228ENST00000548938 A0A087WWV3 80 aa16.15■□□□□ 0.18
HDAC7-228ENST00000548938 BTBD11A6QL63 1104 aa16.15■□□□□ 0.18
HDAC7-228ENST00000548938 BICC1Q9H694 974 aaKnown RBP16.15■□□□□ 0.18
HDAC7-228ENST00000548938 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
HDAC7-228ENST00000548938 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDAC7-228ENST00000548938 V9GYY5 206 aaPredicted RBP16.15■□□□□ 0.18
HDAC7-228ENST00000548938 JCADQ9P266 1359 aa16.15■□□□□ 0.18
HDAC7-228ENST00000548938 G3BP1Q13283 466 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDAC7-228ENST00000548938 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
HDAC7-228ENST00000548938 KIF18AQ8NI77 898 aa16.15■□□□□ 0.18
HDAC7-228ENST00000548938 AXIN2Q9Y2T1 843 aa16.15■□□□□ 0.18
HDAC7-228ENST00000548938 ZNF335Q9H4Z2 1342 aaPredicted RBP16.15■□□□□ 0.18
HDAC7-228ENST00000548938 H3BQV1 296 aa16.14■□□□□ 0.17
HDAC7-228ENST00000548938 GIGYF1O75420 1035 aaPredicted RBP16.14■□□□□ 0.17
HDAC7-228ENST00000548938 TEFQ10587 303 aa16.14■□□□□ 0.17
HDAC7-228ENST00000548938 IFFO2Q5TF58 517 aa16.14■□□□□ 0.17
HDAC7-228ENST00000548938 FTOQ9C0B1 505 aaKnown RBP eCLIP16.14■□□□□ 0.17
HDAC7-228ENST00000548938 HMG20BQ9P0W2 317 aa16.14■□□□□ 0.17
HDAC7-228ENST00000548938 ZNF215Q9UL58 517 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms