RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ZC3H4Q9UPT8 1303 aaKnown RBP20.12■□□□□ 0.81
DDX54-205ENST00000548786 IARSP41252 1262 aaKnown RBP20.12■□□□□ 0.81
DDX54-205ENST00000548786 SF3B3Q15393 1217 aaKnown RBP20.12■□□□□ 0.81
DDX54-205ENST00000548786 UBE3BQ7Z3V4 1068 aa20.12■□□□□ 0.81
DDX54-205ENST00000548786 CELF1Q92879 486 aaKnown RBP20.12■□□□□ 0.81
DDX54-205ENST00000548786 GLTPD2A6NH11 291 aa20.11■□□□□ 0.81
DDX54-205ENST00000548786 BBOX1O75936 387 aa20.11■□□□□ 0.81
DDX54-205ENST00000548786 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
DDX54-205ENST00000548786 PSMD1Q99460 953 aa20.11■□□□□ 0.81
DDX54-205ENST00000548786 SEC31BQ9NQW1 1179 aa20.11■□□□□ 0.81
DDX54-205ENST00000548786 PDE8AO60658 829 aa20.1■□□□□ 0.81
DDX54-205ENST00000548786 DDNO94850 711 aaPredicted RBP20.09■□□□□ 0.81
DDX54-205ENST00000548786 HNRNPUQ00839 825 aaKnown RBP eCLIP20.09■□□□□ 0.81
DDX54-205ENST00000548786 GCKRQ14397 625 aa20.09■□□□□ 0.81
DDX54-205ENST00000548786 SLC4A10Q6U841 1118 aa20.09■□□□□ 0.81
DDX54-205ENST00000548786 DPP8Q6V1X1 898 aaPredicted RBP20.09■□□□□ 0.81
DDX54-205ENST00000548786 SP8Q8IXZ3 490 aa20.09■□□□□ 0.81
DDX54-205ENST00000548786 LINS1Q8NG48 757 aa20.09■□□□□ 0.81
DDX54-205ENST00000548786 COL4A5P29400 1685 aa20.09■□□□□ 0.81
DDX54-205ENST00000548786 CDHR2Q9BYE9 1310 aa20.08■□□□□ 0.81
DDX54-205ENST00000548786 ZNF541Q9H0D2 1346 aa20.08■□□□□ 0.81
DDX54-205ENST00000548786 HSP90B1P14625 803 aaKnown RBP20.08■□□□□ 0.81
DDX54-205ENST00000548786 CTSWP56202 376 aa20.08■□□□□ 0.81
DDX54-205ENST00000548786 CCDC152Q4G0S7 254 aa20.08■□□□□ 0.81
DDX54-205ENST00000548786 DPY19L2Q6NUT2 758 aa20.08■□□□□ 0.81
DDX54-205ENST00000548786 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.81
DDX54-205ENST00000548786 LARGE2Q8N3Y3 721 aa20.08■□□□□ 0.81
DDX54-205ENST00000548786 MRPL50Q8N5N7 158 aaKnown RBP20.08■□□□□ 0.81
DDX54-205ENST00000548786 SSH1Q8WYL5 1049 aa20.08■□□□□ 0.81
DDX54-205ENST00000548786 PPIP5K2O43314 1243 aa20.07■□□□□ 0.8
DDX54-205ENST00000548786 AOC3Q16853 763 aa20.07■□□□□ 0.8
DDX54-205ENST00000548786 MPNDQ8N594 471 aa20.07■□□□□ 0.8
DDX54-205ENST00000548786 H7C1W4 665 aa20.06■□□□□ 0.8
DDX54-205ENST00000548786 BEND3Q5T5X7 828 aa20.06■□□□□ 0.8
DDX54-205ENST00000548786 JDP2Q8WYK2 163 aa20.06■□□□□ 0.8
DDX54-205ENST00000548786 LRRC37AA6NMS7 1700 aa20.05■□□□□ 0.8
DDX54-205ENST00000548786 RPS8P62241 208 aaKnown RBP20.05■□□□□ 0.8
DDX54-205ENST00000548786 GRIPAP1Q4V328 841 aa20.05■□□□□ 0.8
DDX54-205ENST00000548786 TRMT2AQ8IZ69 625 aaKnown RBP20.05■□□□□ 0.8
DDX54-205ENST00000548786 GREM2Q9H772 168 aa20.05■□□□□ 0.8
DDX54-205ENST00000548786 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
DDX54-205ENST00000548786 NSFL1CQ9UNZ2 370 aaKnown RBP20.05■□□□□ 0.8
DDX54-205ENST00000548786 MYH3P11055 1940 aa20.04■□□□□ 0.8
DDX54-205ENST00000548786 GPSM2P81274 684 aa20.04■□□□□ 0.8
DDX54-205ENST00000548786 GPR101Q96P66 508 aaPredicted RBP20.04■□□□□ 0.8
DDX54-205ENST00000548786 SPEF2Q9C093 1822 aa20.04■□□□□ 0.8
DDX54-205ENST00000548786 TOMM70O94826 608 aa20.03■□□□□ 0.8
DDX54-205ENST00000548786 VEGFAP15692 232 aaPredicted RBP20.03■□□□□ 0.8
DDX54-205ENST00000548786 TMC4Q7Z404 712 aa20.03■□□□□ 0.8
DDX54-205ENST00000548786 NIM1KQ8IY84 436 aa20.03■□□□□ 0.8
DDX54-205ENST00000548786 TTLL11Q8NHH1 800 aa20.03■□□□□ 0.8
DDX54-205ENST00000548786 GJA3Q9Y6H8 435 aa20.03■□□□□ 0.8
DDX54-205ENST00000548786 DUOX1Q9NRD9 1551 aa20.03■□□□□ 0.8
DDX54-205ENST00000548786 WDR90Q96KV7 1748 aa20.02■□□□□ 0.8
DDX54-205ENST00000548786 POTECB2RU33 542 aa20.02■□□□□ 0.8
DDX54-205ENST00000548786 C6orf229H3BNL8 230 aa20.02■□□□□ 0.8
DDX54-205ENST00000548786 CASP7P55210 303 aa20.02■□□□□ 0.8
DDX54-205ENST00000548786 ANKRD18AQ8IVF6 992 aa20.02■□□□□ 0.8
DDX54-205ENST00000548786 SUPT20HQ8NEM7 779 aa20.02■□□□□ 0.8
DDX54-205ENST00000548786 RTFDC1Q9BY42 306 aaPredicted RBP20.02■□□□□ 0.8
DDX54-205ENST00000548786 FZD9O00144 591 aa20.01■□□□□ 0.79
DDX54-205ENST00000548786 RIMBP2O15034 1052 aa20.01■□□□□ 0.79
DDX54-205ENST00000548786 EIF6P56537 245 aaKnown RBP20.01■□□□□ 0.79
DDX54-205ENST00000548786 FAM161AQ3B820 660 aa20.01■□□□□ 0.79
DDX54-205ENST00000548786 SRCIN1Q9C0H9 1055 aa20.01■□□□□ 0.79
DDX54-205ENST00000548786 C9orf78Q9NZ63 289 aaPredicted RBP20■□□□□ 0.79
DDX54-205ENST00000548786 ANKIB1Q9P2G1 1089 aa20■□□□□ 0.79
DDX54-205ENST00000548786 CHMP3Q9Y3E7 222 aa20■□□□□ 0.79
DDX54-205ENST00000548786 GRM8O00222 908 aa19.99■□□□□ 0.79
DDX54-205ENST00000548786 ALDH1L2Q3SY69 923 aa19.99■□□□□ 0.79
DDX54-205ENST00000548786 CDC5LQ99459 802 aaKnown RBP19.99■□□□□ 0.79
DDX54-205ENST00000548786 POLLQ9UGP5 575 aa19.99■□□□□ 0.79
DDX54-205ENST00000548786 PTPRCP08575 1304 aa19.99■□□□□ 0.79
DDX54-205ENST00000548786 UFL1O94874 794 aa19.98■□□□□ 0.79
DDX54-205ENST00000548786 ITGA6P23229 1130 aa19.98■□□□□ 0.79
DDX54-205ENST00000548786 KIAA2012Q0VF49 1180 aa19.98■□□□□ 0.79
DDX54-205ENST00000548786 RBM46Q8TBY0 533 aaKnown RBP19.98■□□□□ 0.79
DDX54-205ENST00000548786 PLA2G12BQ9BX93 195 aa19.98■□□□□ 0.79
DDX54-205ENST00000548786 LTBP1Q14766 1721 aa19.97■□□□□ 0.79
DDX54-205ENST00000548786 ALDH1L1O75891 902 aa19.97■□□□□ 0.79
DDX54-205ENST00000548786 POTEIP0CG38 1075 aa19.97■□□□□ 0.79
DDX54-205ENST00000548786 POTEJP0CG39 1038 aa19.97■□□□□ 0.79
DDX54-205ENST00000548786 WASHC4Q2M389 1173 aa19.97■□□□□ 0.79
DDX54-205ENST00000548786 EPHA10Q5JZY3 1008 aa19.97■□□□□ 0.79
DDX54-205ENST00000548786 TBC1D16Q8TBP0 767 aa19.97■□□□□ 0.79
DDX54-205ENST00000548786 RAD17O75943 681 aa19.96■□□□□ 0.79
DDX54-205ENST00000548786 FOXO4P98177 505 aa19.96■□□□□ 0.79
DDX54-205ENST00000548786 DOK7Q18PE1 504 aa19.96■□□□□ 0.79
DDX54-205ENST00000548786 GPC2Q8N158 579 aa19.96■□□□□ 0.79
DDX54-205ENST00000548786 DBNDD1Q9H9R9 158 aa19.96■□□□□ 0.79
DDX54-205ENST00000548786 ZNRF3Q9ULT6 936 aa19.96■□□□□ 0.79
DDX54-205ENST00000548786 NOB1Q9ULX3 412 aaKnown RBP19.96■□□□□ 0.79
DDX54-205ENST00000548786 RTL9Q8NET4 1388 aa19.95■□□□□ 0.79
DDX54-205ENST00000548786 CT47B1P0C2W7 299 aaPredicted RBP19.95■□□□□ 0.78
DDX54-205ENST00000548786 IGHMBP2P38935 993 aaKnown RBP19.95■□□□□ 0.78
DDX54-205ENST00000548786 EAPPQ56P03 285 aaPredicted RBP19.95■□□□□ 0.78
DDX54-205ENST00000548786 LMBR1LQ6UX01 489 aa19.95■□□□□ 0.78
DDX54-205ENST00000548786 L3MBTL3Q96JM7 780 aaPredicted RBP19.95■□□□□ 0.78
DDX54-205ENST00000548786 GGA1Q9UJY5 639 aa19.95■□□□□ 0.78
DDX54-205ENST00000548786 CEP350Q5VT06 3117 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms