RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 PI4KAP2A4QPH2 592 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 ATP5J2-PTCD1G3V325 749 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 CT47B1P0C2W7 299 aaPredicted RBP11.1□□□□□ -0.63
SP1-203ENST00000548560 KCNA3P22001 575 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 TTLL6Q8N841 843 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 PI4KAP1Q8N8J0 262 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 RPGRQ92834 1020 aaKnown RBP11.1□□□□□ -0.63
SP1-203ENST00000548560 CNKSR1Q969H4 720 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 MASTLQ96GX5 879 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 ISCA1Q9BUE6 129 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 METTL22Q9BUU2 404 aaPredicted RBP11.1□□□□□ -0.63
SP1-203ENST00000548560 FER1L6Q2WGJ9 1857 aa11.1□□□□□ -0.63
SP1-203ENST00000548560 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
SP1-203ENST00000548560 ADCY9O60503 1353 aa11.09□□□□□ -0.63
SP1-203ENST00000548560 NPR1P16066 1061 aa11.09□□□□□ -0.63
SP1-203ENST00000548560 C1QTNF8P60827 252 aa11.09□□□□□ -0.63
SP1-203ENST00000548560 STYK1Q6J9G0 422 aa11.09□□□□□ -0.63
SP1-203ENST00000548560 G2E3Q7L622 706 aa11.09□□□□□ -0.63
SP1-203ENST00000548560 NLRP3Q96P20 1036 aa11.09□□□□□ -0.63
SP1-203ENST00000548560 WDR70Q9NW82 654 aa11.09□□□□□ -0.63
SP1-203ENST00000548560 CWC25Q9NXE8 425 aaPredicted RBP11.09□□□□□ -0.63
SP1-203ENST00000548560 CEP350Q5VT06 3117 aa11.09□□□□□ -0.63
SP1-203ENST00000548560 SRGNP10124 158 aa11.08□□□□□ -0.64
SP1-203ENST00000548560 HSP90B1P14625 803 aaKnown RBP11.08□□□□□ -0.64
SP1-203ENST00000548560 TRMT2AQ8IZ69 625 aaKnown RBP11.08□□□□□ -0.64
SP1-203ENST00000548560 CCDC191Q8NCU4 936 aa11.08□□□□□ -0.64
SP1-203ENST00000548560 DNAAF4Q8WXU2 420 aa11.08□□□□□ -0.64
SP1-203ENST00000548560 TAF1P21675 1872 aa11.08□□□□□ -0.64
SP1-203ENST00000548560 DICER1Q9UPY3 1922 aaKnown RBP11.07□□□□□ -0.64
SP1-203ENST00000548560 SPEF2Q9C093 1822 aa11.07□□□□□ -0.64
SP1-203ENST00000548560 ALDH1B1P30837 517 aa11.07□□□□□ -0.64
SP1-203ENST00000548560 TRIM28Q13263 835 aaKnown RBP11.07□□□□□ -0.64
SP1-203ENST00000548560 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
SP1-203ENST00000548560 ALDH1L2Q3SY69 923 aa11.07□□□□□ -0.64
SP1-203ENST00000548560 SOGA3Q5TF21 947 aa11.07□□□□□ -0.64
SP1-203ENST00000548560 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
SP1-203ENST00000548560 ARHGAP27Q6ZUM4 889 aa11.07□□□□□ -0.64
SP1-203ENST00000548560 SMC4Q9NTJ3 1288 aa11.07□□□□□ -0.64
SP1-203ENST00000548560 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
SP1-203ENST00000548560 KLRG2A4D1S0 409 aaPredicted RBP11.06□□□□□ -0.64
SP1-203ENST00000548560 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
SP1-203ENST00000548560 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
SP1-203ENST00000548560 RTL5Q5HYW3 569 aaPredicted RBP11.06□□□□□ -0.64
SP1-203ENST00000548560 PRPF40BQ6NWY9 871 aaKnown RBP11.06□□□□□ -0.64
SP1-203ENST00000548560 ZBTB38Q8NAP3 1195 aaPredicted RBP11.06□□□□□ -0.64
SP1-203ENST00000548560 FAM89AQ96GI7 184 aa11.06□□□□□ -0.64
SP1-203ENST00000548560 RBM17Q96I25 401 aaKnown RBP11.06□□□□□ -0.64
SP1-203ENST00000548560 BCL2L13Q9BXK5 485 aa11.06□□□□□ -0.64
SP1-203ENST00000548560 PTPRCP08575 1304 aa11.06□□□□□ -0.64
SP1-203ENST00000548560 IRS4O14654 1257 aaPredicted RBP11.05□□□□□ -0.64
SP1-203ENST00000548560 PCCAP05165 728 aaPredicted RBP11.05□□□□□ -0.64
SP1-203ENST00000548560 PRKAR2AP13861 404 aaKnown RBP11.05□□□□□ -0.64
SP1-203ENST00000548560 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
SP1-203ENST00000548560 SLC10A5Q5PT55 438 aa11.05□□□□□ -0.64
SP1-203ENST00000548560 MRPL50Q8N5N7 158 aaKnown RBP11.05□□□□□ -0.64
SP1-203ENST00000548560 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
SP1-203ENST00000548560 SSH1Q8WYL5 1049 aa11.05□□□□□ -0.64
SP1-203ENST00000548560 TMX4Q9H1E5 349 aaPredicted RBP11.05□□□□□ -0.64
SP1-203ENST00000548560 NEURL1BA8MQ27 555 aa11.04□□□□□ -0.64
SP1-203ENST00000548560 F6X3S4 739 aa11.04□□□□□ -0.64
SP1-203ENST00000548560 C21orf2O43822 256 aa11.04□□□□□ -0.64
SP1-203ENST00000548560 SLC4A10Q6U841 1118 aa11.04□□□□□ -0.64
SP1-203ENST00000548560 DDX46Q7L014 1031 aaKnown RBP11.04□□□□□ -0.64
SP1-203ENST00000548560 SYNE4Q8N205 404 aa11.04□□□□□ -0.64
SP1-203ENST00000548560 KIF16BQ96L93 1317 aa11.04□□□□□ -0.64
SP1-203ENST00000548560 PDE8AO60658 829 aa11.03□□□□□ -0.64
SP1-203ENST00000548560 IGKV5-2P06315 115 aa11.03□□□□□ -0.64
SP1-203ENST00000548560 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
SP1-203ENST00000548560 CCDC93Q567U6 631 aa11.03□□□□□ -0.64
SP1-203ENST00000548560 CRAMP1Q96RY5 1269 aa11.03□□□□□ -0.64
SP1-203ENST00000548560 FARP1Q9Y4F1 1045 aaPredicted RBP11.03□□□□□ -0.64
SP1-203ENST00000548560 LRRC37AA6NMS7 1700 aa11.03□□□□□ -0.64
SP1-203ENST00000548560 CDHR2Q9BYE9 1310 aa11.03□□□□□ -0.64
SP1-203ENST00000548560 PPEF1O14829 653 aaPredicted RBP11.02□□□□□ -0.65
SP1-203ENST00000548560 RASSF7Q02833 373 aa11.02□□□□□ -0.65
SP1-203ENST00000548560 GCKRQ14397 625 aa11.02□□□□□ -0.65
SP1-203ENST00000548560 CCDC152Q4G0S7 254 aa11.02□□□□□ -0.65
SP1-203ENST00000548560 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
SP1-203ENST00000548560 UBE3BQ7Z3V4 1068 aa11.02□□□□□ -0.65
SP1-203ENST00000548560 SRCIN1Q9C0H9 1055 aa11.02□□□□□ -0.65
SP1-203ENST00000548560 TAOK3Q9H2K8 898 aa11.02□□□□□ -0.65
SP1-203ENST00000548560 ABCC4O15439 1325 aa11.02□□□□□ -0.65
SP1-203ENST00000548560 ALDH1L1O75891 902 aa11.01□□□□□ -0.65
SP1-203ENST00000548560 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
SP1-203ENST00000548560 EVX2Q03828 476 aa11.01□□□□□ -0.65
SP1-203ENST00000548560 SF3B3Q15393 1217 aaKnown RBP11.01□□□□□ -0.65
SP1-203ENST00000548560 BEND3Q5T5X7 828 aa11.01□□□□□ -0.65
SP1-203ENST00000548560 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
SP1-203ENST00000548560 RTKN2Q8IZC4 609 aa11.01□□□□□ -0.65
SP1-203ENST00000548560 LMNB1P20700 586 aa11□□□□□ -0.65
SP1-203ENST00000548560 CTSWP56202 376 aa11□□□□□ -0.65
SP1-203ENST00000548560 GRAPQ13588 217 aa11□□□□□ -0.65
SP1-203ENST00000548560 GRIPAP1Q4V328 841 aa11□□□□□ -0.65
SP1-203ENST00000548560 C9orf131Q5VYM1 1079 aa11□□□□□ -0.65
SP1-203ENST00000548560 TMC4Q7Z404 712 aa11□□□□□ -0.65
SP1-203ENST00000548560 GRAPLQ8TC17 118 aaPredicted RBP11□□□□□ -0.65
SP1-203ENST00000548560 JARID2Q92833 1246 aaPredicted RBP11□□□□□ -0.65
SP1-203ENST00000548560 API5Q9BZZ5 524 aaKnown RBP11□□□□□ -0.65
SP1-203ENST00000548560 C9orf78Q9NZ63 289 aaPredicted RBP11□□□□□ -0.65
SP1-203ENST00000548560 RNF181Q9P0P0 153 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms