RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 PPP1R12BO60237 982 aaPredicted RBP7.09□□□□□ -1.27
TRAFD1-204ENST00000548092 PLA2G4EQ3MJ16 856 aa7.09□□□□□ -1.27
TRAFD1-204ENST00000548092 RHPN1Q8TCX5 695 aa7.09□□□□□ -1.27
TRAFD1-204ENST00000548092 SCG3Q8WXD2 468 aaKnown RBP7.09□□□□□ -1.27
TRAFD1-204ENST00000548092 HSH2DQ96JZ2 352 aa7.09□□□□□ -1.27
TRAFD1-204ENST00000548092 EFCAB5A4FU69 1503 aa7.09□□□□□ -1.27
TRAFD1-204ENST00000548092 CAMSAP1Q5T5Y3 1602 aa7.09□□□□□ -1.28
TRAFD1-204ENST00000548092 AMPD1P23109 780 aa7.08□□□□□ -1.28
TRAFD1-204ENST00000548092 HIRAP54198 1017 aaPredicted RBP7.08□□□□□ -1.28
TRAFD1-204ENST00000548092 SEC13P55735 322 aa7.08□□□□□ -1.28
TRAFD1-204ENST00000548092 DPYDQ12882 1025 aa7.08□□□□□ -1.28
TRAFD1-204ENST00000548092 C1orf53Q5VUE5 145 aa7.08□□□□□ -1.28
TRAFD1-204ENST00000548092 ALDH16A1Q8IZ83 802 aa7.08□□□□□ -1.28
TRAFD1-204ENST00000548092 SLC30A3Q99726 388 aa7.08□□□□□ -1.28
TRAFD1-204ENST00000548092 C2orf49Q9BVC5 232 aaPredicted RBP7.08□□□□□ -1.28
TRAFD1-204ENST00000548092 MKL2Q9ULH7 1088 aa7.08□□□□□ -1.28
TRAFD1-204ENST00000548092 DENND4BO75064 1496 aaPredicted RBP7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 ADH6P28332 368 aa7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 LAMC2Q13753 1193 aa7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 CFAP70Q5T0N1 1121 aa7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 ZNF468Q5VIY5 522 aaPredicted RBP7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 LARP1Q6PKG0 1096 aaKnown RBP7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 SUSD3Q96L08 255 aa7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 VRTNQ9H8Y1 702 aa7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 NEUROD4Q9HD90 331 aa7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 PRR12Q9ULL5 1215 aa7.07□□□□□ -1.28
TRAFD1-204ENST00000548092 KRBA1A5PL33 1030 aa7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 DGKGP49619 791 aa7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 SUZ12Q15022 739 aaKnown RBP7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 CDCA8Q53HL2 280 aa7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 CHSY3Q70JA7 882 aa7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 SYT9Q86SS6 491 aa7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 ANKMY2Q8IV38 441 aa7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 ARXQ96QS3 562 aa7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 HINFPQ9BQA5 517 aa7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 AVENQ9NQS1 362 aaPredicted RBP7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 RBM19Q9Y4C8 960 aaKnown RBP7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 CPS1P31327 1500 aa7.06□□□□□ -1.28
TRAFD1-204ENST00000548092 MAGI2Q86UL8 1455 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 ABCA8O94911 1581 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 PTPRKQ15262 1439 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L15C9J2P7 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L10C9JJH3 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L13C9JLJ4 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L12C9JPN9 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L11C9JVI0 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L21D6R901 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L18D6R9N7 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L22D6RA61 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L17D6RBQ6 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L19D6RCP7 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L20D6RJB6 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 USP17L24Q0WX57 530 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 STAG2Q8N3U4 1231 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 CEP63Q96MT8 703 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 MDFIQ99750 246 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 CHMP3Q9Y3E7 222 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 GPC6Q9Y625 555 aaPredicted RBP7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 UGGT2Q9NYU1 1516 aa7.05□□□□□ -1.28
TRAFD1-204ENST00000548092 C3P01024 1663 aa7.04□□□□□ -1.28
TRAFD1-204ENST00000548092 FAM196BA6NMK8 535 aa7.04□□□□□ -1.28
TRAFD1-204ENST00000548092 RAB44Q7Z6P3 723 aaPredicted RBP7.04□□□□□ -1.28
TRAFD1-204ENST00000548092 NGLY1Q96IV0 654 aa7.04□□□□□ -1.28
TRAFD1-204ENST00000548092 PLA2R1Q13018 1463 aa7.04□□□□□ -1.28
TRAFD1-204ENST00000548092 TCOF1Q13428 1488 aaKnown RBP7.04□□□□□ -1.28
TRAFD1-204ENST00000548092 TRAPPC8Q9Y2L5 1435 aa7.03□□□□□ -1.28
TRAFD1-204ENST00000548092 IGHA1P01876 353 aa7.03□□□□□ -1.28
TRAFD1-204ENST00000548092 PROCP04070 461 aa7.03□□□□□ -1.28
TRAFD1-204ENST00000548092 SPOCK3Q9BQ16 436 aa7.03□□□□□ -1.28
TRAFD1-204ENST00000548092 BRD7Q9NPI1 651 aa7.03□□□□□ -1.28
TRAFD1-204ENST00000548092 BCS1LQ9Y276 419 aa7.03□□□□□ -1.28
TRAFD1-204ENST00000548092 ELOA3CA0A087WX78 387 aaPredicted RBP7.02□□□□□ -1.29
TRAFD1-204ENST00000548092 ELOA3DA6NLF2 546 aaPredicted RBP7.02□□□□□ -1.29
TRAFD1-204ENST00000548092 RFX1P22670 979 aa7.02□□□□□ -1.29
TRAFD1-204ENST00000548092 TYRO3Q06418 890 aa7.02□□□□□ -1.29
TRAFD1-204ENST00000548092 SPEM2Q0P670 501 aa7.02□□□□□ -1.29
TRAFD1-204ENST00000548092 ELOA3BQ3SY89 546 aa7.02□□□□□ -1.29
TRAFD1-204ENST00000548092 ELOA3Q8NG57 546 aa7.02□□□□□ -1.29
TRAFD1-204ENST00000548092 ANKIB1Q9P2G1 1089 aa7.02□□□□□ -1.29
TRAFD1-204ENST00000548092 C9orf84Q5VXU9 1444 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 HECW1Q76N89 1606 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 GNB5O14775 395 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 MSTNO14793 375 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 IGFBP4P22692 258 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 KCNQ4P56696 695 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 TRIM11Q96F44 468 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 DMGDHQ9UI17 866 aaKnown RBP7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 KCNH4Q9UQ05 1017 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 STARD13Q9Y3M8 1113 aa7.01□□□□□ -1.29
TRAFD1-204ENST00000548092 CEP350Q5VT06 3117 aa7□□□□□ -1.29
TRAFD1-204ENST00000548092 SIN3BO75182 1162 aa7□□□□□ -1.29
TRAFD1-204ENST00000548092 WEE1P30291 646 aa7□□□□□ -1.29
TRAFD1-204ENST00000548092 C8orf86Q6ZUL3 223 aa7□□□□□ -1.29
TRAFD1-204ENST00000548092 ATP10AO60312 1499 aa6.99□□□□□ -1.29
TRAFD1-204ENST00000548092 RAPGEF2Q9Y4G8 1499 aa6.99□□□□□ -1.29
TRAFD1-204ENST00000548092 LOC100996750A0A140TA64 210 aa6.99□□□□□ -1.29
TRAFD1-204ENST00000548092 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
TRAFD1-204ENST00000548092 GRNP28799 593 aaKnown RBP6.99□□□□□ -1.29
TRAFD1-204ENST00000548092 COL9A3Q14050 684 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms