RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MSL1Q68DK7 614 aa7.95□□□□□ -1.14
SCAF11-210ENST00000547654 FAM196BA6NMK8 535 aa7.94□□□□□ -1.14
SCAF11-210ENST00000547654 KRT25Q7Z3Z0 450 aa7.94□□□□□ -1.14
SCAF11-210ENST00000547654 WFDC8Q8IUA0 241 aa7.94□□□□□ -1.14
SCAF11-210ENST00000547654 DTWD1Q8N5C7 304 aa7.94□□□□□ -1.14
SCAF11-210ENST00000547654 LGR5O75473 907 aa7.93□□□□□ -1.14
SCAF11-210ENST00000547654 MAP3K6O95382 1288 aa7.93□□□□□ -1.14
SCAF11-210ENST00000547654 IDH3AP50213 366 aa7.93□□□□□ -1.14
SCAF11-210ENST00000547654 ELMSAN1Q6PJG2 1045 aa7.93□□□□□ -1.14
SCAF11-210ENST00000547654 FRRS1LQ9P0K9 344 aa7.93□□□□□ -1.14
SCAF11-210ENST00000547654 BCS1LQ9Y276 419 aa7.93□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L15C9J2P7 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L10C9JJH3 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L13C9JLJ4 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L12C9JPN9 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L11C9JVI0 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L21D6R901 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L18D6R9N7 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L22D6RA61 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L17D6RBQ6 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L19D6RCP7 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L20D6RJB6 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 RARAP10276 462 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 IGFBP4P22692 258 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 ARID4AP29374 1257 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-210ENST00000547654 LMOD1P29536 600 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-210ENST00000547654 ARSDP51689 593 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 MLLT1Q03111 559 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-210ENST00000547654 USP17L24Q0WX57 530 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 DPYDQ12882 1025 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 PERM1Q5SV97 790 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 DHX32Q7L7V1 743 aaKnown RBP7.92□□□□□ -1.14
SCAF11-210ENST00000547654 LPIN3Q9BQK8 851 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 KLK14Q9P0G3 267 aa7.92□□□□□ -1.14
SCAF11-210ENST00000547654 DMGDHQ9UI17 866 aaKnown RBP7.92□□□□□ -1.14
SCAF11-210ENST00000547654 INPP5BP32019 993 aa7.91□□□□□ -1.14
SCAF11-210ENST00000547654 FAM69CQ0P6D2 419 aa7.91□□□□□ -1.14
SCAF11-210ENST00000547654 DGKZQ13574 1117 aa7.91□□□□□ -1.14
SCAF11-210ENST00000547654 FBXO11Q86XK2 927 aa7.91□□□□□ -1.14
SCAF11-210ENST00000547654 VTI1AQ96AJ9 217 aa7.91□□□□□ -1.14
SCAF11-210ENST00000547654 SSBP4Q9BWG4 385 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-210ENST00000547654 C1orf115Q9H7X2 142 aa7.91□□□□□ -1.14
SCAF11-210ENST00000547654 IREB2P48200 963 aaKnown RBP7.9□□□□□ -1.14
SCAF11-210ENST00000547654 WFDC12Q8WWY7 111 aa7.9□□□□□ -1.14
SCAF11-210ENST00000547654 ZMIZ1Q9ULJ6 1067 aa7.9□□□□□ -1.14
SCAF11-210ENST00000547654 HYAL3O43820 417 aaPredicted RBP7.89□□□□□ -1.15
SCAF11-210ENST00000547654 EIF2AK2P19525 551 aaKnown RBP7.89□□□□□ -1.15
SCAF11-210ENST00000547654 GRNP28799 593 aaKnown RBP7.89□□□□□ -1.15
SCAF11-210ENST00000547654 GPLD1P80108 840 aa7.89□□□□□ -1.15
SCAF11-210ENST00000547654 ANKMY2Q8IV38 441 aa7.89□□□□□ -1.15
SCAF11-210ENST00000547654 TRPM4Q8TD43 1214 aa7.89□□□□□ -1.15
SCAF11-210ENST00000547654 ZFATQ9P243 1243 aa7.89□□□□□ -1.15
SCAF11-210ENST00000547654 TARSP26639 723 aaKnown RBP7.88□□□□□ -1.15
SCAF11-210ENST00000547654 NOS3P29474 1203 aa7.88□□□□□ -1.15
SCAF11-210ENST00000547654 GRIK5Q16478 980 aa7.88□□□□□ -1.15
SCAF11-210ENST00000547654 SMG9Q9H0W8 520 aaKnown RBP7.88□□□□□ -1.15
SCAF11-210ENST00000547654 VRTNQ9H8Y1 702 aa7.88□□□□□ -1.15
SCAF11-210ENST00000547654 SASH3O75995 380 aa7.87□□□□□ -1.15
SCAF11-210ENST00000547654 WEE1P30291 646 aa7.87□□□□□ -1.15
SCAF11-210ENST00000547654 PLAURQ03405 335 aa7.87□□□□□ -1.15
SCAF11-210ENST00000547654 ELOAQ14241 798 aaKnown RBP7.87□□□□□ -1.15
SCAF11-210ENST00000547654 IGF2-ASQ6U949 168 aa7.87□□□□□ -1.15
SCAF11-210ENST00000547654 ILDR2Q71H61 639 aa7.87□□□□□ -1.15
SCAF11-210ENST00000547654 IFT43Q96FT9 208 aa7.87□□□□□ -1.15
SCAF11-210ENST00000547654 KRTAP4-9Q9BYQ8 210 aa7.87□□□□□ -1.15
SCAF11-210ENST00000547654 QTRT2Q9H974 415 aaKnown RBP7.87□□□□□ -1.15
SCAF11-210ENST00000547654 C11orf16Q9NQ32 467 aa7.87□□□□□ -1.15
SCAF11-210ENST00000547654 ZBTB42B2RXF5 422 aa7.86□□□□□ -1.15
SCAF11-210ENST00000547654 FOXO3O43524 673 aa7.86□□□□□ -1.15
SCAF11-210ENST00000547654 MICAL2O94851 1124 aa7.86□□□□□ -1.15
SCAF11-210ENST00000547654 HFE2Q6ZVN8 426 aa7.86□□□□□ -1.15
SCAF11-210ENST00000547654 TTC9Q92623 222 aa7.86□□□□□ -1.15
SCAF11-210ENST00000547654 SLAIN2Q9P270 581 aa7.86□□□□□ -1.15
SCAF11-210ENST00000547654 COBLO75128 1261 aa7.85□□□□□ -1.15
SCAF11-210ENST00000547654 NRLP54845 237 aa7.85□□□□□ -1.15
SCAF11-210ENST00000547654 OCLNQ16625 522 aa7.84□□□□□ -1.15
SCAF11-210ENST00000547654 C11orf91Q3C1V1 193 aa7.84□□□□□ -1.15
SCAF11-210ENST00000547654 MEGF10Q96KG7 1140 aa7.84□□□□□ -1.15
SCAF11-210ENST00000547654 KRTAP4-2Q9BYR5 136 aa7.84□□□□□ -1.15
SCAF11-210ENST00000547654 RNF112Q9ULX5 631 aa7.84□□□□□ -1.15
SCAF11-210ENST00000547654 DEAF1O75398 565 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-210ENST00000547654 PRR23CQ6ZRP0 262 aa7.83□□□□□ -1.16
SCAF11-210ENST00000547654 DCAF11Q8TEB1 546 aa7.83□□□□□ -1.16
SCAF11-210ENST00000547654 MYO19Q96H55 970 aa7.83□□□□□ -1.16
SCAF11-210ENST00000547654 RBSNQ9H1K0 784 aa7.83□□□□□ -1.16
SCAF11-210ENST00000547654 AKTIPQ9H8T0 292 aa7.83□□□□□ -1.16
SCAF11-210ENST00000547654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.83□□□□□ -1.16
SCAF11-210ENST00000547654 TLR7Q9NYK1 1049 aaKnown RBP7.83□□□□□ -1.16
SCAF11-210ENST00000547654 RTCBQ9Y3I0 505 aaKnown RBP7.83□□□□□ -1.16
SCAF11-210ENST00000547654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.82□□□□□ -1.16
SCAF11-210ENST00000547654 ARID3CA6NKF2 412 aa7.82□□□□□ -1.16
SCAF11-210ENST00000547654 XYLBO75191 536 aa7.82□□□□□ -1.16
SCAF11-210ENST00000547654 ATG7O95352 703 aa7.82□□□□□ -1.16
SCAF11-210ENST00000547654 GHRHP01286 108 aa7.82□□□□□ -1.16
SCAF11-210ENST00000547654 PSAPP07602 524 aa7.82□□□□□ -1.16
SCAF11-210ENST00000547654 CDCA8Q53HL2 280 aa7.82□□□□□ -1.16
SCAF11-210ENST00000547654 GDF6Q6KF10 455 aaPredicted RBP7.82□□□□□ -1.16
SCAF11-210ENST00000547654 RGL4Q8IZJ4 473 aa7.82□□□□□ -1.16
SCAF11-210ENST00000547654 PLD4Q96BZ4 506 aa7.82□□□□□ -1.16
SCAF11-210ENST00000547654 NSUN5Q96P11 429 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms