RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 FERMT3Q86UX7 667 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 SPATS2Q86XZ4 545 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 SUGP1Q8IWZ8 645 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 IFNL3Q8IZI9 196 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 MICALL1Q8N3F8 863 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 GOLGA6L1Q8N7Z2 621 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 NKAIN3Q8N8D7 197 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 PHC3Q8NDX5 983 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 PPHLN1Q8NEY8 458 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 GABPB2Q8TAK5 448 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 FAM76AQ8TAV0 307 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 FBXO41Q8TF61 875 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 N4BP2L2Q92802 583 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 JARID2Q92833 1246 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 TATDN2Q93075 761 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 CHMP4CQ96CF2 233 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 MRFAP1L1Q96HT8 127 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 DUSP9Q99956 384 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 TRIM7Q9C029 511 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 TGIF2Q9GZN2 237 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 CSRNP2Q9H175 543 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 DNAJC25Q9H1X3 360 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 VPS33BQ9H267 617 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 SLKQ9H2G2 1235 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 UNC45AQ9H3U1 944 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 ARNT2Q9HBZ2 717 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 RIC8AQ9NPQ8 531 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 RRAGDQ9NQL2 400 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 DIAPH3Q9NSV4 1193 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 GINM1Q9NU53 330 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 STIM2Q9P246 746 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 RABL2AQ9UBK7 228 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 SEL1LQ9UBV2 794 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 BLOC1S6Q9UL45 172 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 FAM184BQ9ULE4 1060 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 TPCN1Q9ULQ1 816 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 SUFUQ9UMX1 484 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 GTF2A1LQ9UNN4 478 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 ITM2BQ9Y287 266 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 PPP2R3BQ9Y5P8 575 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 MRPL42Q9Y6G3 142 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 SLC30A1Q9Y6M5 507 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 PIK3R4Q99570 1358 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 SOWAHDA6NJG2 315 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 C19orf81C9J6K1 198 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.3□□□□□ -2.04
CFTR-207ENST00000546407 FOXN3O00409 490 aaPredicted RBP2.3□□□□□ -2.04
CFTR-207ENST00000546407 FIBPO43427 364 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 SGTAO43765 313 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 ZBED4O75132 1171 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 NR1I2O75469 434 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 ERLIN1O75477 346 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 SKAP2O75563 359 aaPredicted RBP2.3□□□□□ -2.04
CFTR-207ENST00000546407 BAG2O95816 211 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 MMEP08473 750 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 SRGNP10124 158 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 RFX1P22670 979 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 ATP6V1AP38606 617 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 CAP2P40123 477 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 RBM5P52756 815 aaKnown RBP eCLIP2.3□□□□□ -2.04
CFTR-207ENST00000546407 RWDD2BP57060 319 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 SNX16P57768 344 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 INHBEP58166 350 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 UBXN2AP68543 259 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 NUCB2P80303 420 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 ZBED6P86452 979 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 LMNB2Q03252 620 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 GABPB1Q06547 395 aaPredicted RBP2.3□□□□□ -2.04
CFTR-207ENST00000546407 ADCY2Q08462 1091 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 SFSWAPQ12872 951 aaKnown RBP2.3□□□□□ -2.04
CFTR-207ENST00000546407 ZBTB17Q13105 803 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 STK3Q13188 491 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 PDE1CQ14123 709 aaPredicted RBP2.3□□□□□ -2.04
CFTR-207ENST00000546407 MRPL58Q14197 206 aaKnown RBP2.3□□□□□ -2.04
CFTR-207ENST00000546407 PDIA5Q14554 519 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 SLMAPQ14BN4 828 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 POSTNQ15063 836 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 CNGA3Q16281 694 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 HNRNPUL2Q1KMD3 747 aaKnown RBP2.3□□□□□ -2.04
CFTR-207ENST00000546407 CCDC178Q5BJE1 867 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 DNAJC21Q5F1R6 531 aaKnown RBP2.3□□□□□ -2.04
CFTR-207ENST00000546407 SPECC1Q5M775 1068 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 AGAP9Q5VTM2 703 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 CCDC30Q5VVM6 783 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 KIAA1614Q5VZ46 1190 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 MCTP2Q6DN12 878 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 ISM2Q6H9L7 571 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 PPP4R4Q6NUP7 873 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 PPP1R18Q6NYC8 613 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 SYNE3Q6ZMZ3 975 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 CCDC80Q76M96 950 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 CDC37L1Q7L3B6 337 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 RASSF3Q86WH2 238 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 SNX32Q86XE0 403 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 NCAPG2Q86XI2 1143 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 NUTM1Q86Y26 1132 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 KIAA0825Q8IV33 1275 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 ANKRD18AQ8IVF6 992 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 EFCAB13Q8IY85 973 aa2.3□□□□□ -2.04
CFTR-207ENST00000546407 IFNL2Q8IZJ0 200 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms