RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PALLDQ8WX93 1383 aa14.53□□□□□ -0.08
CCDC38-202ENST00000546386 PRPF40BQ6NWY9 871 aaKnown RBP14.52□□□□□ -0.08
CCDC38-202ENST00000546386 ISCA1Q9BUE6 129 aa14.52□□□□□ -0.08
CCDC38-202ENST00000546386 BCL9LQ86UU0 1499 aa14.52□□□□□ -0.09
CCDC38-202ENST00000546386 TNS2Q63HR2 1409 aa14.52□□□□□ -0.09
CCDC38-202ENST00000546386 PPFIA3O75145 1194 aa14.52□□□□□ -0.09
CCDC38-202ENST00000546386 ITGA6P23229 1130 aa14.52□□□□□ -0.09
CCDC38-202ENST00000546386 DEKP35659 375 aaKnown RBP14.52□□□□□ -0.09
CCDC38-202ENST00000546386 KCNJ4P48050 445 aa14.52□□□□□ -0.09
CCDC38-202ENST00000546386 RABL6Q3YEC7 729 aaPredicted RBP14.52□□□□□ -0.09
CCDC38-202ENST00000546386 LINC00116Q8NCU8 138 aa14.52□□□□□ -0.09
CCDC38-202ENST00000546386 COPRSQ9NQ92 184 aa14.52□□□□□ -0.09
CCDC38-202ENST00000546386 NIP7Q9Y221 180 aaKnown RBP eCLIP14.52□□□□□ -0.09
CCDC38-202ENST00000546386 COL14A1Q05707 1796 aaKnown RBP14.51□□□□□ -0.09
CCDC38-202ENST00000546386 ARFGEF2Q9Y6D5 1785 aa14.51□□□□□ -0.09
CCDC38-202ENST00000546386 AHDC1Q5TGY3 1603 aaPredicted RBP14.51□□□□□ -0.09
CCDC38-202ENST00000546386 A0A1B0GUL7 405 aa14.51□□□□□ -0.09
CCDC38-202ENST00000546386 K7ELQ4 463 aaPredicted RBP14.51□□□□□ -0.09
CCDC38-202ENST00000546386 ADCK5Q3MIX3 580 aa14.51□□□□□ -0.09
CCDC38-202ENST00000546386 ERC1Q8IUD2 1116 aa14.51□□□□□ -0.09
CCDC38-202ENST00000546386 CERKQ8TCT0 537 aa14.51□□□□□ -0.09
CCDC38-202ENST00000546386 A0A0G2JLW4 131 aa14.51□□□□□ -0.09
CCDC38-202ENST00000546386 LDHAL6AQ6ZMR3 332 aa14.51□□□□□ -0.09
CCDC38-202ENST00000546386 CCDC87Q9NVE4 849 aa14.51□□□□□ -0.09
CCDC38-202ENST00000546386 IQSEC3Q9UPP2 1182 aaPredicted RBP14.51□□□□□ -0.09
CCDC38-202ENST00000546386 SCARF1Q14162 830 aa14.5□□□□□ -0.09
CCDC38-202ENST00000546386 GORABQ5T7V8 394 aa14.5□□□□□ -0.09
CCDC38-202ENST00000546386 GPATCH3Q96I76 525 aa14.5□□□□□ -0.09
CCDC38-202ENST00000546386 AFF2P51816 1311 aa14.5□□□□□ -0.09
CCDC38-202ENST00000546386 SGSM2O43147 1006 aa14.5□□□□□ -0.09
CCDC38-202ENST00000546386 IFIT5Q13325 482 aaKnown RBP14.5□□□□□ -0.09
CCDC38-202ENST00000546386 ZBTB38Q8NAP3 1195 aaPredicted RBP14.5□□□□□ -0.09
CCDC38-202ENST00000546386 ABCC6O95255 1503 aa14.5□□□□□ -0.09
CCDC38-202ENST00000546386 PLCH1Q4KWH8 1693 aa14.5□□□□□ -0.09
CCDC38-202ENST00000546386 KIAA1211Q6ZU35 1233 aa14.49□□□□□ -0.09
CCDC38-202ENST00000546386 TTLL11Q8NHH1 800 aa14.49□□□□□ -0.09
CCDC38-202ENST00000546386 TEX13AQ9BXU3 409 aaPredicted RBP14.49□□□□□ -0.09
CCDC38-202ENST00000546386 CNNM1Q9NRU3 951 aa14.49□□□□□ -0.09
CCDC38-202ENST00000546386 TAOK2Q9UL54 1235 aa14.49□□□□□ -0.09
CCDC38-202ENST00000546386 HDAC5Q9UQL6 1122 aa14.49□□□□□ -0.09
CCDC38-202ENST00000546386 LRP6O75581 1613 aa14.49□□□□□ -0.09
CCDC38-202ENST00000546386 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
CCDC38-202ENST00000546386 EYA2O00167 538 aa14.48□□□□□ -0.09
CCDC38-202ENST00000546386 SSFA2P28290 1259 aa14.48□□□□□ -0.09
CCDC38-202ENST00000546386 C3orf67Q6ZVT6 689 aa14.48□□□□□ -0.09
CCDC38-202ENST00000546386 EIF5P55010 431 aaKnown RBP14.48□□□□□ -0.09
CCDC38-202ENST00000546386 LSG1Q9H089 658 aaKnown RBP14.48□□□□□ -0.09
CCDC38-202ENST00000546386 DOT1LQ8TEK3 1739 aa14.47□□□□□ -0.09
CCDC38-202ENST00000546386 GNPATO15228 680 aa14.47□□□□□ -0.09
CCDC38-202ENST00000546386 METTL24Q5JXM2 366 aa14.47□□□□□ -0.09
CCDC38-202ENST00000546386 VPS53Q5VIR6 699 aa14.47□□□□□ -0.09
CCDC38-202ENST00000546386 CEP126Q9P2H0 1117 aa14.47□□□□□ -0.09
CCDC38-202ENST00000546386 THRAP3Q9Y2W1 955 aaKnown RBP14.47□□□□□ -0.09
CCDC38-202ENST00000546386 ERBB4Q15303 1308 aa14.47□□□□□ -0.09
CCDC38-202ENST00000546386 TTC41PQ6P2S7 1318 aa14.47□□□□□ -0.09
CCDC38-202ENST00000546386 CASTP20810 708 aaKnown RBP14.47□□□□□ -0.09
CCDC38-202ENST00000546386 SLIT2O94813 1529 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 RABEP1Q15276 862 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 VPS72Q15906 364 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 EVI5LQ96CN4 794 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 LRRC2Q9BYS8 371 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 SNX14Q9Y5W7 946 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 JCADQ9P266 1359 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 PCCAP05165 728 aaPredicted RBP14.46□□□□□ -0.09
CCDC38-202ENST00000546386 GTF2E1P29083 439 aaPredicted RBP14.46□□□□□ -0.09
CCDC38-202ENST00000546386 IL6STP40189 918 aaPredicted RBP14.46□□□□□ -0.09
CCDC38-202ENST00000546386 USPL1Q5W0Q7 1092 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 SEPT12Q8IYM1 358 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 XAGE2Q96GT9 111 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 GJD4Q96KN9 370 aaPredicted RBP14.46□□□□□ -0.09
CCDC38-202ENST00000546386 UBR2Q8IWV8 1755 aa14.46□□□□□ -0.09
CCDC38-202ENST00000546386 MYH14Q7Z406 1995 aaKnown RBP14.46□□□□□ -0.09
CCDC38-202ENST00000546386 CTSWP56202 376 aa14.45□□□□□ -0.1
CCDC38-202ENST00000546386 BARGINQ6ZT62 677 aa14.45□□□□□ -0.1
CCDC38-202ENST00000546386 QTRT2Q9H974 415 aaKnown RBP14.45□□□□□ -0.1
CCDC38-202ENST00000546386 CAMTA2O94983 1202 aa14.45□□□□□ -0.1
CCDC38-202ENST00000546386 STK11IPQ8N1F8 1099 aa14.45□□□□□ -0.1
CCDC38-202ENST00000546386 TNPO1Q92973 898 aaKnown RBP14.45□□□□□ -0.1
CCDC38-202ENST00000546386 TMX3Q96JJ7 454 aa14.45□□□□□ -0.1
CCDC38-202ENST00000546386 JAKMIP1Q96N16 626 aaKnown RBP14.45□□□□□ -0.1
CCDC38-202ENST00000546386 NPHP1O15259 732 aa14.44□□□□□ -0.1
CCDC38-202ENST00000546386 ST18O60284 1047 aa14.44□□□□□ -0.1
CCDC38-202ENST00000546386 IFIT1P09914 478 aaKnown RBP14.44□□□□□ -0.1
CCDC38-202ENST00000546386 FNBP4Q8N3X1 1017 aaPredicted RBP14.44□□□□□ -0.1
CCDC38-202ENST00000546386 SNX21Q969T3 373 aa14.44□□□□□ -0.1
CCDC38-202ENST00000546386 CCNL1Q9UK58 526 aaPredicted RBP14.44□□□□□ -0.1
CCDC38-202ENST00000546386 JAG2Q9Y219 1238 aa14.44□□□□□ -0.1
CCDC38-202ENST00000546386 COL15A1P39059 1388 aa14.44□□□□□ -0.1
CCDC38-202ENST00000546386 TRIM37O94972 964 aa14.44□□□□□ -0.1
CCDC38-202ENST00000546386 ERFEQ4G0M1 354 aa14.44□□□□□ -0.1
CCDC38-202ENST00000546386 CHST3Q7LGC8 479 aa14.44□□□□□ -0.1
CCDC38-202ENST00000546386 CDCA7Q9BWT1 371 aaPredicted RBP14.44□□□□□ -0.1
CCDC38-202ENST00000546386 RBM8AQ9Y5S9 174 aaKnown RBP14.44□□□□□ -0.1
CCDC38-202ENST00000546386 TBC1D9BQ66K14 1250 aa14.43□□□□□ -0.1
CCDC38-202ENST00000546386 CHMP5Q9NZZ3 219 aa14.43□□□□□ -0.1
CCDC38-202ENST00000546386 N4BP2Q86UW6 1770 aaPredicted RBP14.43□□□□□ -0.1
CCDC38-202ENST00000546386 LARGE1O95461 756 aa14.43□□□□□ -0.1
CCDC38-202ENST00000546386 HSPA4P34932 840 aa14.43□□□□□ -0.1
CCDC38-202ENST00000546386 IL15P40933 162 aaPredicted RBP14.43□□□□□ -0.1
CCDC38-202ENST00000546386 ZAP70P43403 619 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms