RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 CCDC114Q96M63 670 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 CEP89Q96ST8 783 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 HOOK1Q9UJC3 728 aaKnown RBP11.93□□□□□ -0.5
SOD2-216ENST00000546260 F6X3S4 739 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 TBC1D8O95759 1140 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 CEP85LQ5SZL2 805 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 NAIF1Q69YI7 327 aaPredicted RBP11.93□□□□□ -0.5
SOD2-216ENST00000546260 CEP85Q6P2H3 762 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 NYAP1Q6ZVC0 841 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 CCDC148Q8NFR7 591 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 MPHOSPH8Q99549 860 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 CABP2Q9NPB3 220 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 SPATS2LQ9NUQ6 558 aaKnown RBP11.93□□□□□ -0.5
SOD2-216ENST00000546260 MBD5Q9P267 1494 aa11.93□□□□□ -0.5
SOD2-216ENST00000546260 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
SOD2-216ENST00000546260 PPARDQ03181 441 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 GOLGA8FQ08AF8 430 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 GOLGA8DPQ0D2H9 430 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 DCTN1Q14203 1278 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 MEX3CQ5U5Q3 659 aaKnown RBP11.92□□□□□ -0.5
SOD2-216ENST00000546260 HDGFL2Q7Z4V5 671 aaPredicted RBP11.92□□□□□ -0.5
SOD2-216ENST00000546260 ATRIPQ8WXE1 791 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 TRIM6Q9C030 488 aaPredicted RBP11.92□□□□□ -0.5
SOD2-216ENST00000546260 GCC2Q8IWJ2 1684 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 C9orf84Q5VXU9 1444 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 E2F5Q15329 346 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 PTPN21Q16825 1174 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.92□□□□□ -0.5
SOD2-216ENST00000546260 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
SOD2-216ENST00000546260 PPP1R12AO14974 1030 aaPredicted RBP11.92□□□□□ -0.5
SOD2-216ENST00000546260 SLC3A2P08195 630 aaKnown RBP11.92□□□□□ -0.5
SOD2-216ENST00000546260 CDC25BP30305 580 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 TXLNAP40222 546 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 TMEM132EQ6IEE7 984 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 RNF217Q8TC41 542 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 RABGGTAQ92696 567 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 MED4Q9NPJ6 270 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
SOD2-216ENST00000546260 KIAA1328Q86T90 577 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 ARHGAP45Q92619 1136 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 PAIP2Q9BPZ3 127 aaKnown RBP11.92□□□□□ -0.5
SOD2-216ENST00000546260 SNAPC4Q5SXM2 1469 aa11.92□□□□□ -0.5
SOD2-216ENST00000546260 ABCC2Q92887 1545 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 PLEKHG2Q9H7P9 1386 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 EPB41L2O43491 1005 aaKnown RBP11.91□□□□□ -0.5
SOD2-216ENST00000546260 VAMP4O75379 141 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 KIF4AO95239 1232 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 ZNF569Q5MCW4 686 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
SOD2-216ENST00000546260 CCDC151A5D8V7 595 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 TADA3O75528 432 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
SOD2-216ENST00000546260 TSR1Q2NL82 804 aaKnown RBP11.91□□□□□ -0.5
SOD2-216ENST00000546260 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
SOD2-216ENST00000546260 STK11IPQ8N1F8 1099 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 FAM71BQ8TC56 605 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 IMPACTQ9P2X3 320 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 FAM169AQ9Y6X4 670 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 HNRNPH1P31943 449 aaKnown RBP11.91□□□□□ -0.5
SOD2-216ENST00000546260 EGFL6Q8IUX8 553 aa11.91□□□□□ -0.5
SOD2-216ENST00000546260 GOLGA6CA6NDK9 693 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 RNF40O75150 1001 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 SASH3O75995 380 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 GOLGA6DP0CG33 693 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 CCZ1BP86790 482 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 CCZ1P86791 482 aaPredicted RBP11.9□□□□□ -0.5
SOD2-216ENST00000546260 ACTN3Q08043 901 aaPredicted RBP11.9□□□□□ -0.5
SOD2-216ENST00000546260 ANKRD1Q15327 319 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 CEP120Q8N960 986 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 RSRC1Q96IZ7 334 aaKnown RBP11.9□□□□□ -0.5
SOD2-216ENST00000546260 GOLGA6AQ9NYA3 693 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 SNX14Q9Y5W7 946 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 RGS12O14924 1447 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 KRT24Q2M2I5 525 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 PRG4Q92954 1404 aaPredicted RBP11.9□□□□□ -0.5
SOD2-216ENST00000546260 H3BQF6 201 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 ELF1P32519 619 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 RUFY3Q7L099 469 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 NUP133Q8WUM0 1156 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 DESI2Q9BSY9 194 aa11.9□□□□□ -0.5
SOD2-216ENST00000546260 N4BP1O75113 896 aaKnown RBP11.9□□□□□ -0.51
SOD2-216ENST00000546260 IPO7O95373 1038 aaKnown RBP11.9□□□□□ -0.51
SOD2-216ENST00000546260 PIK3R5Q8WYR1 880 aa11.9□□□□□ -0.51
SOD2-216ENST00000546260 BRF1Q92994 677 aa11.9□□□□□ -0.51
SOD2-216ENST00000546260 E4F1Q66K89 784 aaPredicted RBP11.89□□□□□ -0.51
SOD2-216ENST00000546260 MICAL1Q8TDZ2 1067 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 JPH4Q96JJ6 628 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 BAG1Q99933 345 aaPredicted RBP11.89□□□□□ -0.51
SOD2-216ENST00000546260 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
SOD2-216ENST00000546260 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 IL16Q14005 1332 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 TTC41PQ6P2S7 1318 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 PHLPP2Q6ZVD8 1323 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
SOD2-216ENST00000546260 GNGT1P63211 74 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 DHX58Q96C10 678 aa11.89□□□□□ -0.51
SOD2-216ENST00000546260 FUCA2Q9BTY2 467 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms