RNA–Protein interactions for RNA: ENST00000546157.1

LRTM2-211, Transcript of leucine rich repeats and transmembrane domains 2, human

TSL 4

Gene LRTM2, Length 560 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTM2-211	ENST00000546157	GJA3	Q9Y6H8	435 aa		27.73	■■■□□ 2.03
LRTM2-211	ENST00000546157	WWC1	Q8IX03	1113 aa		27.72	■■■□□ 2.03
LRTM2-211	ENST00000546157	MRS2	Q9HD23	443 aa		27.72	■■■□□ 2.03
LRTM2-211	ENST00000546157	NIM1K	Q8IY84	436 aa		27.71	■■■□□ 2.03
LRTM2-211	ENST00000546157	PCNT	O95613	3336 aa		27.7	■■■□□ 2.03
LRTM2-211	ENST00000546157	SF3B3	Q15393	1217 aa	Known RBP	27.7	■■■□□ 2.02
LRTM2-211	ENST00000546157	DPP8	Q6V1X1	898 aa	Predicted RBP	27.7	■■■□□ 2.02
LRTM2-211	ENST00000546157	MPND	Q8N594	471 aa		27.7	■■■□□ 2.02
LRTM2-211	ENST00000546157	PASK	Q96RG2	1323 aa		27.69	■■■□□ 2.02
LRTM2-211	ENST00000546157	ANP32C	O43423	234 aa		27.69	■■■□□ 2.02
LRTM2-211	ENST00000546157	CCDC30	Q5VVM6	783 aa		27.69	■■■□□ 2.02
LRTM2-211	ENST00000546157	MYD88	Q99836	296 aa		27.69	■■■□□ 2.02
LRTM2-211	ENST00000546157	VPS33B	Q9H267	617 aa		27.69	■■■□□ 2.02
LRTM2-211	ENST00000546157	IRS4	O14654	1257 aa	Predicted RBP	27.68	■■■□□ 2.02
LRTM2-211	ENST00000546157	SCNN1D	P51172	638 aa		27.68	■■■□□ 2.02
LRTM2-211	ENST00000546157	SUPT20H	Q8NEM7	779 aa		27.68	■■■□□ 2.02
LRTM2-211	ENST00000546157	CELF1	Q92879	486 aa	Known RBP	27.68	■■■□□ 2.02
LRTM2-211	ENST00000546157	ITGBL1	O95965	494 aa	Predicted RBP	27.67	■■■□□ 2.02
LRTM2-211	ENST00000546157	CLEC11A	Q9Y240	323 aa		27.67	■■■□□ 2.02
LRTM2-211	ENST00000546157	PNMA8A	Q86V59	439 aa	Predicted RBP	27.66	■■■□□ 2.02
LRTM2-211	ENST00000546157	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.66	■■■□□ 2.02
LRTM2-211	ENST00000546157	CREBZF	Q9NS37	354 aa		27.66	■■■□□ 2.02
LRTM2-211	ENST00000546157	EPS15	P42566	896 aa		27.65	■■■□□ 2.02
LRTM2-211	ENST00000546157	KIAA2012	Q0VF49	1180 aa		27.65	■■■□□ 2.02
LRTM2-211	ENST00000546157	TMC4	Q7Z404	712 aa		27.65	■■■□□ 2.02
LRTM2-211	ENST00000546157	ZNRF3	Q9ULT6	936 aa		27.65	■■■□□ 2.02
LRTM2-211	ENST00000546157	MAP1S	Q66K74	1059 aa	Predicted RBP	27.64	■■■□□ 2.02
LRTM2-211	ENST00000546157	CCDC191	Q8NCU4	936 aa		27.64	■■■□□ 2.02
LRTM2-211	ENST00000546157	METTL22	Q9BUU2	404 aa	Predicted RBP	27.64	■■■□□ 2.02
LRTM2-211	ENST00000546157	IL16	Q14005	1332 aa		27.64	■■■□□ 2.01
LRTM2-211	ENST00000546157	LMOD1	P29536	600 aa	Predicted RBP	27.63	■■■□□ 2.01
LRTM2-211	ENST00000546157	CXCL9	Q07325	125 aa		27.63	■■■□□ 2.01
LRTM2-211	ENST00000546157	NCBP3	Q53F19	620 aa	Known RBP	27.63	■■■□□ 2.01
LRTM2-211	ENST00000546157	JARID2	Q92833	1246 aa	Predicted RBP	27.63	■■■□□ 2.01
LRTM2-211	ENST00000546157	DDX58	O95786	925 aa	Known RBP	27.62	■■■□□ 2.01
LRTM2-211	ENST00000546157	TWISTNB	Q3B726	338 aa	Predicted RBP	27.62	■■■□□ 2.01
LRTM2-211	ENST00000546157	CHMP4A	Q9BY43	222 aa		27.62	■■■□□ 2.01
LRTM2-211	ENST00000546157	MAP3K2	Q9Y2U5	619 aa		27.62	■■■□□ 2.01
LRTM2-211	ENST00000546157	PCCA	P05165	728 aa	Predicted RBP	27.61	■■■□□ 2.01
LRTM2-211	ENST00000546157	CWC25	Q9NXE8	425 aa	Predicted RBP	27.61	■■■□□ 2.01
LRTM2-211	ENST00000546157	IFFO2	Q5TF58	517 aa		27.6	■■■□□ 2.01
LRTM2-211	ENST00000546157	CNTROB	Q8N137	903 aa		27.6	■■■□□ 2.01
LRTM2-211	ENST00000546157	MKRN1	Q9UHC7	482 aa	Known RBP	27.6	■■■□□ 2.01
LRTM2-211	ENST00000546157	MYH3	P11055	1940 aa		27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	CACNA1F	O60840	1977 aa		27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	PI4KAP2	A4QPH2	592 aa		27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	GPSM2	P81274	684 aa		27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	KSR2	Q6VAB6	950 aa		27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	G2E3	Q7L622	706 aa		27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	PI4KAP1	Q8N8J0	262 aa		27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	SEC31B	Q9NQW1	1179 aa		27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	SALL2	Q9Y467	1007 aa	Predicted RBP	27.59	■■■□□ 2.01
LRTM2-211	ENST00000546157	YDJC	A8MPS7	323 aa		27.58	■■■□□ 2.01
LRTM2-211	ENST00000546157	IGKV5-2	P06315	115 aa		27.58	■■■□□ 2.01
LRTM2-211	ENST00000546157	STK31	Q9BXU1	1019 aa		27.58	■■■□□ 2.01
LRTM2-211	ENST00000546157	GPRC5D	Q9NZD1	345 aa		27.58	■■■□□ 2.01
LRTM2-211	ENST00000546157	FANCI	Q9NVI1	1328 aa		27.58	■■■□□ 2.01
LRTM2-211	ENST00000546157	RAD17	O75943	681 aa		27.57	■■■□□ 2
LRTM2-211	ENST00000546157	RPS8	P62241	208 aa	Known RBP	27.57	■■■□□ 2
LRTM2-211	ENST00000546157	CIAPIN1	Q6FI81	312 aa		27.57	■■■□□ 2
LRTM2-211	ENST00000546157	POLL	Q9UGP5	575 aa		27.57	■■■□□ 2
LRTM2-211	ENST00000546157	TMEM88B	A6NKF7	163 aa		27.56	■■■□□ 2
LRTM2-211	ENST00000546157	PDE8A	O60658	829 aa		27.56	■■■□□ 2
LRTM2-211	ENST00000546157	GMPS	P49915	693 aa	Predicted RBP	27.56	■■■□□ 2
LRTM2-211	ENST00000546157	CNTNAP1	P78357	1384 aa		27.56	■■■□□ 2
LRTM2-211	ENST00000546157	WASHC4	Q2M389	1173 aa		27.55	■■■□□ 2
LRTM2-211	ENST00000546157	USP50	Q70EL3	339 aa	Predicted RBP	27.55	■■■□□ 2
LRTM2-211	ENST00000546157	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.55	■■■□□ 2
LRTM2-211	ENST00000546157	SPEF2	Q9C093	1822 aa		27.55	■■■□□ 2
LRTM2-211	ENST00000546157	SLC4A2	P04920	1241 aa		27.54	■■■□□ 2
LRTM2-211	ENST00000546157	HSP90B1	P14625	803 aa	Known RBP	27.54	■■■□□ 2
LRTM2-211	ENST00000546157	GPR101	Q96P66	508 aa	Predicted RBP	27.54	■■■□□ 2
LRTM2-211	ENST00000546157	TRPM7	Q96QT4	1865 aa		27.54	■■■□□ 2
LRTM2-211	ENST00000546157	CDHR2	Q9BYE9	1310 aa		27.54	■■■□□ 2
LRTM2-211	ENST00000546157	ADARB2	Q9NS39	739 aa	Known RBP	27.54	■■■□□ 2
LRTM2-211	ENST00000546157	C6orf229	H3BNL8	230 aa		27.53	■■■□□ 2
LRTM2-211	ENST00000546157	FMR1	Q06787	632 aa	Known RBP eCLIP	27.53	■■■□□ 2
LRTM2-211	ENST00000546157	CWF19L2	Q2TBE0	894 aa	Known RBP	27.53	■■■□□ 2
LRTM2-211	ENST00000546157	CCDC152	Q4G0S7	254 aa		27.53	■■■□□ 2
LRTM2-211	ENST00000546157	WDR63	Q8IWG1	891 aa		27.53	■■■□□ 2
LRTM2-211	ENST00000546157	SCN9A	Q15858	1988 aa		27.53	■■■□□ 2
LRTM2-211	ENST00000546157	RIMBP2	O15034	1052 aa		27.52	■■■□□ 2
LRTM2-211	ENST00000546157	HSPA1A	P0DMV8	641 aa	Known RBP	27.52	■■■□□ 2
LRTM2-211	ENST00000546157	HSPA1B	P0DMV9	641 aa	Known RBP	27.52	■■■□□ 2
LRTM2-211	ENST00000546157	TNIP1	Q15025	636 aa		27.52	■■■□□ 2
LRTM2-211	ENST00000546157	TBC1D16	Q8TBP0	767 aa		27.52	■■■□□ 2
LRTM2-211	ENST00000546157	DBNDD1	Q9H9R9	158 aa		27.52	■■■□□ 2
LRTM2-211	ENST00000546157	SPINK5	Q9NQ38	1064 aa	Predicted RBP	27.52	■■■□□ 2
LRTM2-211	ENST00000546157	NEURL1B	A8MQ27	555 aa		27.51	■■□□□ 1.99
LRTM2-211	ENST00000546157	SHTN1	A0MZ66	631 aa		27.5	■■□□□ 1.99
LRTM2-211	ENST00000546157	VAMP4	O75379	141 aa		27.5	■■□□□ 1.99
LRTM2-211	ENST00000546157	NEXN	Q0ZGT2	675 aa		27.5	■■□□□ 1.99
LRTM2-211	ENST00000546157	FLII	Q13045	1269 aa		27.5	■■□□□ 1.99
LRTM2-211	ENST00000546157	FAM9B	Q8IZU0	186 aa		27.5	■■□□□ 1.99
LRTM2-211	ENST00000546157	BCL2L13	Q9BXK5	485 aa		27.5	■■□□□ 1.99
LRTM2-211	ENST00000546157	PODXL2	Q9NZ53	605 aa		27.5	■■□□□ 1.99
LRTM2-211	ENST00000546157	CTSW	P56202	376 aa		27.49	■■□□□ 1.99
LRTM2-211	ENST00000546157	EXOSC9	Q06265	439 aa	Known RBP	27.49	■■□□□ 1.99
LRTM2-211	ENST00000546157	PSMD14	O00487	310 aa		27.48	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms