RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 N4BP2Q86UW6 1770 aaPredicted RBP22.01■■□□□ 1.11
CD9-211ENST00000546073 YY1P25490 414 aa21.99■■□□□ 1.11
CD9-211ENST00000546073 TAF7LQ5H9L4 462 aa21.99■■□□□ 1.11
CD9-211ENST00000546073 ANKRD18AQ8IVF6 992 aa21.99■■□□□ 1.11
CD9-211ENST00000546073 TAOK3Q9H2K8 898 aa21.99■■□□□ 1.11
CD9-211ENST00000546073 IGHMBP2P38935 993 aaKnown RBP21.98■■□□□ 1.11
CD9-211ENST00000546073 RPS8P62241 208 aaKnown RBP21.98■■□□□ 1.11
CD9-211ENST00000546073 SUPT20HQ8NEM7 779 aa21.98■■□□□ 1.11
CD9-211ENST00000546073 CCDC85AQ96PX6 553 aaPredicted RBP21.98■■□□□ 1.11
CD9-211ENST00000546073 PLA2G12BQ9BX93 195 aa21.98■■□□□ 1.11
CD9-211ENST00000546073 ABCC4O15439 1325 aa21.98■■□□□ 1.11
CD9-211ENST00000546073 UBTFL1P0CB47 393 aaPredicted RBP21.97■■□□□ 1.11
CD9-211ENST00000546073 CCDC57Q2TAC2 916 aa21.97■■□□□ 1.11
CD9-211ENST00000546073 C3orf67Q6ZVT6 689 aa21.97■■□□□ 1.11
CD9-211ENST00000546073 ATP6V0A2Q9Y487 856 aa21.97■■□□□ 1.11
CD9-211ENST00000546073 ANKRD18BA2A2Z9 1011 aa21.96■■□□□ 1.11
CD9-211ENST00000546073 IFIT5Q13325 482 aaKnown RBP21.96■■□□□ 1.11
CD9-211ENST00000546073 SP8Q8IXZ3 490 aa21.96■■□□□ 1.11
CD9-211ENST00000546073 TTLL11Q8NHH1 800 aa21.96■■□□□ 1.11
CD9-211ENST00000546073 CLUAP1Q96AJ1 413 aa21.96■■□□□ 1.11
CD9-211ENST00000546073 MPHOSPH8Q99549 860 aa21.96■■□□□ 1.11
CD9-211ENST00000546073 GNAI3P08754 354 aa21.95■■□□□ 1.1
CD9-211ENST00000546073 LMNB1P20700 586 aa21.95■■□□□ 1.1
CD9-211ENST00000546073 DZIP1LQ8IYY4 767 aaKnown RBP21.95■■□□□ 1.1
CD9-211ENST00000546073 TRIM27P14373 513 aa21.94■■□□□ 1.1
CD9-211ENST00000546073 FKBP4Q02790 459 aaKnown RBP eCLIP21.94■■□□□ 1.1
CD9-211ENST00000546073 DPP8Q6V1X1 898 aaPredicted RBP21.94■■□□□ 1.1
CD9-211ENST00000546073 MPNDQ8N594 471 aa21.94■■□□□ 1.1
CD9-211ENST00000546073 CHMP4BQ9H444 224 aaKnown RBP21.94■■□□□ 1.1
CD9-211ENST00000546073 RNF181Q9P0P0 153 aa21.94■■□□□ 1.1
CD9-211ENST00000546073 ANKRD31Q8N7Z5 1873 aa21.94■■□□□ 1.1
CD9-211ENST00000546073 INTS3Q68E01 1043 aaKnown RBP21.93■■□□□ 1.1
CD9-211ENST00000546073 C9orf131Q5VYM1 1079 aa21.92■■□□□ 1.1
CD9-211ENST00000546073 LMBR1LQ6UX01 489 aa21.92■■□□□ 1.1
CD9-211ENST00000546073 ANKIB1Q9P2G1 1089 aa21.92■■□□□ 1.1
CD9-211ENST00000546073 LTBP3Q9NS15 1303 aa21.91■■□□□ 1.1
CD9-211ENST00000546073 NBPF7P0C2Y1 421 aaPredicted RBP21.91■■□□□ 1.1
CD9-211ENST00000546073 ITGA6P23229 1130 aa21.91■■□□□ 1.1
CD9-211ENST00000546073 CASP7P55210 303 aa21.91■■□□□ 1.1
CD9-211ENST00000546073 C7orf43Q8WVR3 580 aa21.91■■□□□ 1.1
CD9-211ENST00000546073 JDP2Q8WYK2 163 aa21.91■■□□□ 1.1
CD9-211ENST00000546073 CELF1Q92879 486 aaKnown RBP21.91■■□□□ 1.1
CD9-211ENST00000546073 USP44Q9H0E7 712 aa21.91■■□□□ 1.1
CD9-211ENST00000546073 GREM2Q9H772 168 aa21.91■■□□□ 1.1
CD9-211ENST00000546073 SEC31BQ9NQW1 1179 aa21.91■■□□□ 1.1
CD9-211ENST00000546073 NSFL1CQ9UNZ2 370 aaKnown RBP21.91■■□□□ 1.1
CD9-211ENST00000546073 KIAA1551Q9HCM1 1747 aa21.91■■□□□ 1.1
CD9-211ENST00000546073 UTYO14607 1347 aa21.9■■□□□ 1.1
CD9-211ENST00000546073 G3V3G9 751 aa21.9■■□□□ 1.1
CD9-211ENST00000546073 CSF1RP07333 972 aa21.9■■□□□ 1.1
CD9-211ENST00000546073 RASSF7Q02833 373 aa21.9■■□□□ 1.1
CD9-211ENST00000546073 DCAF8Q5TAQ9 597 aa21.9■■□□□ 1.1
CD9-211ENST00000546073 ITPRIPQ8IWB1 547 aa21.9■■□□□ 1.1
CD9-211ENST00000546073 PSMD1Q99460 953 aa21.9■■□□□ 1.1
CD9-211ENST00000546073 EYA3Q99504 573 aa21.9■■□□□ 1.1
CD9-211ENST00000546073 VPS33BQ9H267 617 aa21.9■■□□□ 1.1
CD9-211ENST00000546073 RTL9Q8NET4 1388 aa21.89■■□□□ 1.1
CD9-211ENST00000546073 DPY19L2Q6NUT2 758 aa21.89■■□□□ 1.09
CD9-211ENST00000546073 SUCLG2Q96I99 432 aa21.89■■□□□ 1.09
CD9-211ENST00000546073 DLEC1Q9Y238 1755 aa21.89■■□□□ 1.09
CD9-211ENST00000546073 TNRC6CQ9HCJ0 1690 aaKnown RBP21.88■■□□□ 1.09
CD9-211ENST00000546073 C6orf229H3BNL8 230 aa21.88■■□□□ 1.09
CD9-211ENST00000546073 FAM161AQ3B820 660 aa21.88■■□□□ 1.09
CD9-211ENST00000546073 BSDC1Q9NW68 430 aaPredicted RBP21.88■■□□□ 1.09
CD9-211ENST00000546073 FOXO4P98177 505 aa21.87■■□□□ 1.09
CD9-211ENST00000546073 ANKRD2Q9GZV1 360 aa21.87■■□□□ 1.09
CD9-211ENST00000546073 CNNM1Q9NRU3 951 aa21.87■■□□□ 1.09
CD9-211ENST00000546073 COL11A2P13942 1736 aaPredicted RBP21.86■■□□□ 1.09
CD9-211ENST00000546073 ZC3H4Q9UPT8 1303 aaKnown RBP21.86■■□□□ 1.09
CD9-211ENST00000546073 NFKBIEO00221 500 aa21.86■■□□□ 1.09
CD9-211ENST00000546073 GNAI2P04899 355 aa21.86■■□□□ 1.09
CD9-211ENST00000546073 KCNJ4P48050 445 aa21.86■■□□□ 1.09
CD9-211ENST00000546073 LARGE2Q8N3Y3 721 aa21.86■■□□□ 1.09
CD9-211ENST00000546073 TMEM57Q8N5G2 664 aa21.86■■□□□ 1.09
CD9-211ENST00000546073 BICC1Q9H694 974 aaKnown RBP21.86■■□□□ 1.09
CD9-211ENST00000546073 ARFGEF1Q9Y6D6 1849 aa21.85■■□□□ 1.09
CD9-211ENST00000546073 IARSP41252 1262 aaKnown RBP21.85■■□□□ 1.09
CD9-211ENST00000546073 LDHAL6AQ6ZMR3 332 aa21.85■■□□□ 1.09
CD9-211ENST00000546073 ZNF277Q9NRM2 450 aaPredicted RBP21.85■■□□□ 1.09
CD9-211ENST00000546073 GGA1Q9UJY5 639 aa21.85■■□□□ 1.09
CD9-211ENST00000546073 PPIP5K2O43314 1243 aa21.84■■□□□ 1.09
CD9-211ENST00000546073 ATP2B4P23634 1241 aa21.84■■□□□ 1.09
CD9-211ENST00000546073 OLFM4Q6UX06 510 aa21.84■■□□□ 1.09
CD9-211ENST00000546073 NIM1KQ8IY84 436 aa21.84■■□□□ 1.09
CD9-211ENST00000546073 ZC3H12CQ9C0D7 883 aaKnown RBP21.84■■□□□ 1.09
CD9-211ENST00000546073 BRCA1P38398 1863 aaKnown RBP21.83■■□□□ 1.09
CD9-211ENST00000546073 XDHP47989 1333 aa21.83■■□□□ 1.09
CD9-211ENST00000546073 KDM2BQ8NHM5 1336 aa21.83■■□□□ 1.09
CD9-211ENST00000546073 EIF6P56537 245 aaKnown RBP21.83■■□□□ 1.09
CD9-211ENST00000546073 WASHC4Q2M389 1173 aa21.83■■□□□ 1.09
CD9-211ENST00000546073 SLX4Q8IY92 1834 aa21.83■■□□□ 1.08
CD9-211ENST00000546073 MEIS3Q99687 375 aa21.82■■□□□ 1.08
CD9-211ENST00000546073 DDX19BQ9UMR2 479 aa21.82■■□□□ 1.08
CD9-211ENST00000546073 LRRFIP2Q9Y608 721 aaKnown RBP21.82■■□□□ 1.08
CD9-211ENST00000546073 DDX60Q8IY21 1712 aaKnown RBP21.82■■□□□ 1.08
CD9-211ENST00000546073 UFL1O94874 794 aa21.81■■□□□ 1.08
CD9-211ENST00000546073 GPSM2P81274 684 aa21.81■■□□□ 1.08
CD9-211ENST00000546073 PDE3AQ14432 1141 aa21.81■■□□□ 1.08
CD9-211ENST00000546073 RABL6Q3YEC7 729 aaPredicted RBP21.81■■□□□ 1.08
CD9-211ENST00000546073 EPHA10Q5JZY3 1008 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms