RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 MPNDQ8N594 471 aa21.91■■□□□ 1.1
CPSF7-225ENST00000545934 GPR101Q96P66 508 aaPredicted RBP21.91■■□□□ 1.1
CPSF7-225ENST00000545934 COL4A1P02462 1669 aa21.91■■□□□ 1.1
CPSF7-225ENST00000545934 TMPOP42166 694 aaKnown RBP21.9■■□□□ 1.1
CPSF7-225ENST00000545934 TCIRG1Q13488 830 aa21.9■■□□□ 1.1
CPSF7-225ENST00000545934 XAGE3Q8WTP9 111 aa21.9■■□□□ 1.1
CPSF7-225ENST00000545934 CASP8AP2Q9UKL3 1982 aa21.89■■□□□ 1.09
CPSF7-225ENST00000545934 HCLS1P14317 486 aaPredicted RBP21.89■■□□□ 1.09
CPSF7-225ENST00000545934 MAP2K2P36507 400 aa21.89■■□□□ 1.09
CPSF7-225ENST00000545934 HIRAP54198 1017 aaPredicted RBP21.89■■□□□ 1.09
CPSF7-225ENST00000545934 GRAPQ13588 217 aa21.89■■□□□ 1.09
CPSF7-225ENST00000545934 CIAPIN1Q6FI81 312 aa21.89■■□□□ 1.09
CPSF7-225ENST00000545934 SAPCD2Q86UD0 394 aa21.89■■□□□ 1.09
CPSF7-225ENST00000545934 GRAPLQ8TC17 118 aaPredicted RBP21.89■■□□□ 1.09
CPSF7-225ENST00000545934 SH3TC1Q8TE82 1336 aa21.88■■□□□ 1.09
CPSF7-225ENST00000545934 PSME4Q14997 1843 aa21.88■■□□□ 1.09
CPSF7-225ENST00000545934 ZC3H15Q8WU90 426 aaKnown RBP21.88■■□□□ 1.09
CPSF7-225ENST00000545934 HHIPL1Q96JK4 782 aa21.88■■□□□ 1.09
CPSF7-225ENST00000545934 YDJCA8MPS7 323 aa21.87■■□□□ 1.09
CPSF7-225ENST00000545934 LMOD3Q0VAK6 560 aa21.87■■□□□ 1.09
CPSF7-225ENST00000545934 PAXIP1Q6ZW49 1069 aaPredicted RBP21.87■■□□□ 1.09
CPSF7-225ENST00000545934 DDX46Q7L014 1031 aaKnown RBP21.87■■□□□ 1.09
CPSF7-225ENST00000545934 GLIS2Q9BZE0 524 aaPredicted RBP21.87■■□□□ 1.09
CPSF7-225ENST00000545934 SCN9AQ15858 1988 aa21.87■■□□□ 1.09
CPSF7-225ENST00000545934 CHL1O00533 1208 aa21.86■■□□□ 1.09
CPSF7-225ENST00000545934 AOC2O75106 756 aa21.86■■□□□ 1.09
CPSF7-225ENST00000545934 AIMP1Q12904 312 aaKnown RBP21.86■■□□□ 1.09
CPSF7-225ENST00000545934 TNIP1Q15025 636 aa21.86■■□□□ 1.09
CPSF7-225ENST00000545934 TMC4Q7Z404 712 aa21.86■■□□□ 1.09
CPSF7-225ENST00000545934 TRMT112Q9UI30 125 aaKnown RBP21.86■■□□□ 1.09
CPSF7-225ENST00000545934 RAD17O75943 681 aa21.85■■□□□ 1.09
CPSF7-225ENST00000545934 CELF2O95319 508 aaKnown RBP21.85■■□□□ 1.09
CPSF7-225ENST00000545934 KRT24Q2M2I5 525 aa21.85■■□□□ 1.09
CPSF7-225ENST00000545934 TRPM4Q8TD43 1214 aa21.85■■□□□ 1.09
CPSF7-225ENST00000545934 NECTIN2Q92692 538 aa21.85■■□□□ 1.09
CPSF7-225ENST00000545934 GRM1Q13255 1194 aa21.84■■□□□ 1.09
CPSF7-225ENST00000545934 BEGAINQ9BUH8 593 aa21.84■■□□□ 1.09
CPSF7-225ENST00000545934 RALBP1Q15311 655 aa21.83■■□□□ 1.09
CPSF7-225ENST00000545934 ISCA1Q9BUE6 129 aa21.83■■□□□ 1.09
CPSF7-225ENST00000545934 BCL2L13Q9BXK5 485 aa21.83■■□□□ 1.09
CPSF7-225ENST00000545934 CNOT7Q9UIV1 285 aaKnown RBP21.83■■□□□ 1.09
CPSF7-225ENST00000545934 SHTN1A0MZ66 631 aa21.82■■□□□ 1.08
CPSF7-225ENST00000545934 SF3B3Q15393 1217 aaKnown RBP21.82■■□□□ 1.08
CPSF7-225ENST00000545934 CDC37L1Q7L3B6 337 aa21.82■■□□□ 1.08
CPSF7-225ENST00000545934 CHPF2Q9P2E5 772 aa21.82■■□□□ 1.08
CPSF7-225ENST00000545934 TRIM35Q9UPQ4 493 aa21.82■■□□□ 1.08
CPSF7-225ENST00000545934 AKAP11Q9UKA4 1901 aa21.81■■□□□ 1.08
CPSF7-225ENST00000545934 BRPF1P55201 1214 aaPredicted RBP21.81■■□□□ 1.08
CPSF7-225ENST00000545934 PLBD2Q8NHP8 589 aa21.81■■□□□ 1.08
CPSF7-225ENST00000545934 DPF2Q92785 391 aa21.81■■□□□ 1.08
CPSF7-225ENST00000545934 CA12O43570 354 aa21.8■■□□□ 1.08
CPSF7-225ENST00000545934 HOXB7P09629 217 aa21.8■■□□□ 1.08
CPSF7-225ENST00000545934 CELF1Q92879 486 aaKnown RBP21.8■■□□□ 1.08
CPSF7-225ENST00000545934 TSKSQ9UJT2 592 aa21.8■■□□□ 1.08
CPSF7-225ENST00000545934 RGS19P49795 217 aa21.79■■□□□ 1.08
CPSF7-225ENST00000545934 MICALL2Q8IY33 904 aa21.79■■□□□ 1.08
CPSF7-225ENST00000545934 H7C1D1 291 aa21.78■■□□□ 1.08
CPSF7-225ENST00000545934 ANKRD13DQ6ZTN6 518 aa21.78■■□□□ 1.08
CPSF7-225ENST00000545934 FAM89AQ96GI7 184 aa21.78■■□□□ 1.08
CPSF7-225ENST00000545934 ZBTB12Q9Y330 459 aaPredicted RBP21.78■■□□□ 1.08
CPSF7-225ENST00000545934 PSMD14O00487 310 aa21.77■■□□□ 1.08
CPSF7-225ENST00000545934 WASHC4Q2M389 1173 aa21.77■■□□□ 1.08
CPSF7-225ENST00000545934 FAM161AQ3B820 660 aa21.77■■□□□ 1.08
CPSF7-225ENST00000545934 HDGFL1Q5TGJ6 251 aa21.77■■□□□ 1.08
CPSF7-225ENST00000545934 DBF4Q9UBU7 674 aaPredicted RBP21.77■■□□□ 1.08
CPSF7-225ENST00000545934 POLLQ9UGP5 575 aa21.77■■□□□ 1.08
CPSF7-225ENST00000545934 ZNF646O15015 1829 aaPredicted RBP21.77■■□□□ 1.08
CPSF7-225ENST00000545934 RTL9Q8NET4 1388 aa21.76■■□□□ 1.07
CPSF7-225ENST00000545934 GPSM2P81274 684 aa21.76■■□□□ 1.07
CPSF7-225ENST00000545934 TRIM28Q13263 835 aaKnown RBP21.76■■□□□ 1.07
CPSF7-225ENST00000545934 USP48Q86UV5 1035 aa21.76■■□□□ 1.07
CPSF7-225ENST00000545934 CCDC146Q8IYE0 955 aa21.76■■□□□ 1.07
CPSF7-225ENST00000545934 ZNF428Q96B54 188 aa21.76■■□□□ 1.07
CPSF7-225ENST00000545934 ZNF408Q9H9D4 720 aa21.76■■□□□ 1.07
CPSF7-225ENST00000545934 DBNDD1Q9H9R9 158 aa21.76■■□□□ 1.07
CPSF7-225ENST00000545934 NSFL1CQ9UNZ2 370 aaKnown RBP21.76■■□□□ 1.07
CPSF7-225ENST00000545934 MYH3P11055 1940 aa21.75■■□□□ 1.07
CPSF7-225ENST00000545934 EGFRP00533 1210 aa21.75■■□□□ 1.07
CPSF7-225ENST00000545934 NEUROD2Q15784 382 aa21.75■■□□□ 1.07
CPSF7-225ENST00000545934 DLK2Q6UY11 383 aa21.75■■□□□ 1.07
CPSF7-225ENST00000545934 SAMD7Q7Z3H4 446 aa21.75■■□□□ 1.07
CPSF7-225ENST00000545934 RUNDC1Q96C34 613 aa21.75■■□□□ 1.07
CPSF7-225ENST00000545934 MYBBP1AQ9BQG0 1328 aaKnown RBP21.75■■□□□ 1.07
CPSF7-225ENST00000545934 CCDC85CA6NKD9 419 aa21.74■■□□□ 1.07
CPSF7-225ENST00000545934 ATP5J2-PTCD1G3V325 749 aa21.74■■□□□ 1.07
CPSF7-225ENST00000545934 RPS12P25398 132 aaKnown RBP21.74■■□□□ 1.07
CPSF7-225ENST00000545934 NOGQ13253 232 aa21.74■■□□□ 1.07
CPSF7-225ENST00000545934 ZIC5Q96T25 663 aa21.74■■□□□ 1.07
CPSF7-225ENST00000545934 SPEF2Q9C093 1822 aa21.73■■□□□ 1.07
CPSF7-225ENST00000545934 ZNF609O15014 1411 aa21.73■■□□□ 1.07
CPSF7-225ENST00000545934 FAM155AB1AL88 458 aaPredicted RBP21.73■■□□□ 1.07
CPSF7-225ENST00000545934 MCOLN1Q9GZU1 580 aa21.73■■□□□ 1.07
CPSF7-225ENST00000545934 KCNQ5Q9NR82 932 aa21.73■■□□□ 1.07
CPSF7-225ENST00000545934 HYPKQ9NX55 129 aa21.73■■□□□ 1.07
CPSF7-225ENST00000545934 LAS1LQ9Y4W2 734 aaKnown RBP21.73■■□□□ 1.07
CPSF7-225ENST00000545934 RIMBP2O15034 1052 aa21.72■■□□□ 1.07
CPSF7-225ENST00000545934 ECE2O60344 883 aa21.72■■□□□ 1.07
CPSF7-225ENST00000545934 HUNKP57058 714 aa21.72■■□□□ 1.07
CPSF7-225ENST00000545934 TBC1D10BQ4KMP7 808 aaPredicted RBP21.72■■□□□ 1.07
CPSF7-225ENST00000545934 TBC1D16Q8TBP0 767 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms