RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 RGPD1P0DJD0 1748 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 USP6P35125 1406 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 QPCTQ16769 361 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 HSP90AB4PQ58FF6 505 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 PRPF38BQ5VTL8 546 aaKnown RBP7.82□□□□□ -1.16
SNHG1-225ENST00000545920 CCDC30Q5VVM6 783 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 TRAF7Q6Q0C0 670 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 NUDT18Q6ZVK8 323 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 ESYT1Q9BSJ8 1104 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 LRRCC1Q9C099 1032 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 PLEKHG1Q9ULL1 1385 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 NALCNQ8IZF0 1738 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 DIP2AQ14689 1571 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 NBPF26B4DH59 902 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 TPM3P06753 285 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 ATP8B2P98198 1209 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 SULT6B1Q6IMI4 303 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 CAVIN1Q6NZI2 390 aaKnown RBP7.81□□□□□ -1.16
SNHG1-225ENST00000545920 WAPLQ7Z5K2 1190 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 KCTD17Q8N5Z5 321 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 TATDN2Q93075 761 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 THUMPD2Q9BTF0 503 aaKnown RBP7.81□□□□□ -1.16
SNHG1-225ENST00000545920 ZKSCAN5Q9Y2L8 839 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 TMEM2Q9UHN6 1383 aa7.81□□□□□ -1.16
SNHG1-225ENST00000545920 ERBB4Q15303 1308 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 TOPAZ1Q8N9V7 1692 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 ANKARQ7Z5J8 1434 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 DYNC1I1O14576 645 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 MX1P20591 662 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 TMX3Q96JJ7 454 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 MEIS3Q99687 375 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 PRM3Q9NNZ6 103 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 METP08581 1390 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 TNRQ92752 1358 aa7.8□□□□□ -1.16
SNHG1-225ENST00000545920 IGSF1Q8N6C5 1336 aa7.79□□□□□ -1.16
SNHG1-225ENST00000545920 SMAPO00193 183 aa7.79□□□□□ -1.16
SNHG1-225ENST00000545920 ELL2O00472 640 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-225ENST00000545920 PRPF40AO75400 957 aaKnown RBP7.79□□□□□ -1.16
SNHG1-225ENST00000545920 NDUFV2P19404 249 aa7.79□□□□□ -1.16
SNHG1-225ENST00000545920 CHMLP26374 656 aa7.79□□□□□ -1.16
SNHG1-225ENST00000545920 USP46P62068 366 aa7.79□□□□□ -1.16
SNHG1-225ENST00000545920 KIAA1211Q6ZU35 1233 aa7.79□□□□□ -1.16
SNHG1-225ENST00000545920 PACS2Q86VP3 889 aa7.79□□□□□ -1.16
SNHG1-225ENST00000545920 TSPY26PQ9H489 355 aa7.79□□□□□ -1.16
SNHG1-225ENST00000545920 ESF1Q9H501 851 aaKnown RBP7.79□□□□□ -1.16
SNHG1-225ENST00000545920 TSPYL4Q9UJ04 414 aa7.79□□□□□ -1.16
SNHG1-225ENST00000545920 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-225ENST00000545920 USP42Q9H9J4 1324 aaKnown RBP7.78□□□□□ -1.16
SNHG1-225ENST00000545920 ADGRL3Q9HAR2 1447 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 LRRC37A3O60309 1634 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 DLG5Q8TDM6 1919 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 KDM4AO75164 1064 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 NEK4P51957 841 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 HMGN5P82970 282 aaKnown RBP7.78□□□□□ -1.16
SNHG1-225ENST00000545920 RRS1Q15050 365 aaKnown RBP7.78□□□□□ -1.16
SNHG1-225ENST00000545920 SSH3Q8TE77 659 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 RUFY2Q8WXA3 655 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 ZSCAN31Q96LW9 406 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-225ENST00000545920 TM6SF1Q9BZW5 370 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 PNMA3Q9UL41 463 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 ZDHHC9Q9Y397 364 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 CCDC9Q9Y3X0 531 aaKnown RBP7.78□□□□□ -1.16
SNHG1-225ENST00000545920 MAP3K5Q99683 1374 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 DIP2BQ9P265 1576 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 ACEP12821 1306 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 TTC41PQ6P2S7 1318 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 PRR36Q9H6K5 1346 aa7.78□□□□□ -1.16
SNHG1-225ENST00000545920 N4BP2Q86UW6 1770 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-225ENST00000545920 USP54Q70EL1 1684 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 NRG2O14511 850 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-225ENST00000545920 AP1G2O75843 785 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 HSPA4P34932 840 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 GCGRP47871 477 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 PPP4CP60510 307 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 TJAP1Q5JTD0 557 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 CCDC183Q5T5S1 534 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 SASS6Q6UVJ0 657 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 TXNDC2Q86VQ3 553 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 TICAM2Q86XR7 235 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 AEBP1Q8IUX7 1158 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 GPT2Q8TD30 523 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 KIF1BPQ96EK5 621 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 GJD4Q96KN9 370 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-225ENST00000545920 PRIMPOLQ96LW4 560 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 RBSNQ9H1K0 784 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 SH2B1Q9NRF2 756 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-225ENST00000545920 TBC1D2BQ9UPU7 963 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 ADAMTS13Q76LX8 1427 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 RAD50Q92878 1312 aa7.77□□□□□ -1.17
SNHG1-225ENST00000545920 LMTK3Q96Q04 1460 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 ROBO2Q9HCK4 1378 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 FAM83GA6ND36 823 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 GNAT3A8MTJ3 354 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 HIP1O00291 1037 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 USP17L8P0C7I0 530 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 UBTFL1P0CB47 393 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-225ENST00000545920 UBE2HP62256 183 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 KIAA2012Q0VF49 1180 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 TAF7Q15545 349 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-225ENST00000545920 ERC1Q8IUD2 1116 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms