RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SLC51AQ86UW1 340 aa25.62■■□□□ 1.69
CHD4-213ENST00000545584 TSR2Q969E8 191 aaKnown RBP25.62■■□□□ 1.69
CHD4-213ENST00000545584 IRS4O14654 1257 aaPredicted RBP25.61■■□□□ 1.69
CHD4-213ENST00000545584 SF3B3Q15393 1217 aaKnown RBP25.61■■□□□ 1.69
CHD4-213ENST00000545584 RTL5Q5HYW3 569 aaPredicted RBP25.61■■□□□ 1.69
CHD4-213ENST00000545584 PNMA8AQ86V59 439 aaPredicted RBP25.61■■□□□ 1.69
CHD4-213ENST00000545584 CLEC11AQ9Y240 323 aa25.61■■□□□ 1.69
CHD4-213ENST00000545584 LMOD1P29536 600 aaPredicted RBP25.6■■□□□ 1.69
CHD4-213ENST00000545584 AOC3Q16853 763 aa25.6■■□□□ 1.69
CHD4-213ENST00000545584 TSPYL6Q8N831 410 aa25.6■■□□□ 1.69
CHD4-213ENST00000545584 MYD88Q99836 296 aa25.6■■□□□ 1.69
CHD4-213ENST00000545584 STK31Q9BXU1 1019 aa25.6■■□□□ 1.69
CHD4-213ENST00000545584 RTFDC1Q9BY42 306 aaPredicted RBP25.6■■□□□ 1.69
CHD4-213ENST00000545584 IL16Q14005 1332 aa25.6■■□□□ 1.69
CHD4-213ENST00000545584 ZBTB38Q8NAP3 1195 aaPredicted RBP25.59■■□□□ 1.69
CHD4-213ENST00000545584 COL4A5P29400 1685 aa25.58■■□□□ 1.69
CHD4-213ENST00000545584 DDX60Q8IY21 1712 aaKnown RBP25.58■■□□□ 1.69
CHD4-213ENST00000545584 CCDC191Q8NCU4 936 aa25.58■■□□□ 1.69
CHD4-213ENST00000545584 TWISTNBQ3B726 338 aaPredicted RBP25.57■■□□□ 1.68
CHD4-213ENST00000545584 METTL22Q9BUU2 404 aaPredicted RBP25.57■■□□□ 1.68
CHD4-213ENST00000545584 CWC25Q9NXE8 425 aaPredicted RBP25.56■■□□□ 1.68
CHD4-213ENST00000545584 ZNRF3Q9ULT6 936 aa25.56■■□□□ 1.68
CHD4-213ENST00000545584 JMYQ8N9B5 988 aa25.55■■□□□ 1.68
CHD4-213ENST00000545584 PCCAP05165 728 aaPredicted RBP25.54■■□□□ 1.68
CHD4-213ENST00000545584 KIAA2012Q0VF49 1180 aa25.54■■□□□ 1.68
CHD4-213ENST00000545584 CELF1Q92879 486 aaKnown RBP25.54■■□□□ 1.68
CHD4-213ENST00000545584 CREBZFQ9NS37 354 aa25.54■■□□□ 1.68
CHD4-213ENST00000545584 MAP3K2Q9Y2U5 619 aa25.54■■□□□ 1.68
CHD4-213ENST00000545584 SALL2Q9Y467 1007 aaPredicted RBP25.54■■□□□ 1.68
CHD4-213ENST00000545584 TAF1P21675 1872 aa25.53■■□□□ 1.68
CHD4-213ENST00000545584 KSR2Q6VAB6 950 aa25.53■■□□□ 1.68
CHD4-213ENST00000545584 RPS8P62241 208 aaKnown RBP25.52■■□□□ 1.68
CHD4-213ENST00000545584 NEXNQ0ZGT2 675 aa25.52■■□□□ 1.68
CHD4-213ENST00000545584 WDR63Q8IWG1 891 aa25.52■■□□□ 1.68
CHD4-213ENST00000545584 NSFL1CQ9UNZ2 370 aaKnown RBP25.52■■□□□ 1.68
CHD4-213ENST00000545584 PI4KAP2A4QPH2 592 aa25.51■■□□□ 1.67
CHD4-213ENST00000545584 PDE8AO60658 829 aa25.51■■□□□ 1.67
CHD4-213ENST00000545584 SCNN1DP51172 638 aa25.51■■□□□ 1.67
CHD4-213ENST00000545584 CXCL9Q07325 125 aa25.51■■□□□ 1.67
CHD4-213ENST00000545584 CCDC152Q4G0S7 254 aa25.51■■□□□ 1.67
CHD4-213ENST00000545584 PI4KAP1Q8N8J0 262 aa25.51■■□□□ 1.67
CHD4-213ENST00000545584 PASKQ96RG2 1323 aa25.51■■□□□ 1.67
CHD4-213ENST00000545584 SLC4A2P04920 1241 aa25.5■■□□□ 1.67
CHD4-213ENST00000545584 FANCIQ9NVI1 1328 aa25.49■■□□□ 1.67
CHD4-213ENST00000545584 ITGBL1O95965 494 aaPredicted RBP25.49■■□□□ 1.67
CHD4-213ENST00000545584 EPS15P42566 896 aa25.49■■□□□ 1.67
CHD4-213ENST00000545584 TNIP1Q15025 636 aa25.49■■□□□ 1.67
CHD4-213ENST00000545584 CIAPIN1Q6FI81 312 aa25.49■■□□□ 1.67
CHD4-213ENST00000545584 FAM9BQ8IZU0 186 aa25.49■■□□□ 1.67
CHD4-213ENST00000545584 CNTROBQ8N137 903 aa25.49■■□□□ 1.67
CHD4-213ENST00000545584 LRRC37AA6NMS7 1700 aa25.49■■□□□ 1.67
CHD4-213ENST00000545584 C6orf229H3BNL8 230 aa25.48■■□□□ 1.67
CHD4-213ENST00000545584 WASHC4Q2M389 1173 aa25.48■■□□□ 1.67
CHD4-213ENST00000545584 MAP1SQ66K74 1059 aaPredicted RBP25.48■■□□□ 1.67
CHD4-213ENST00000545584 USP50Q70EL3 339 aaPredicted RBP25.48■■□□□ 1.67
CHD4-213ENST00000545584 JARID2Q92833 1246 aaPredicted RBP25.48■■□□□ 1.67
CHD4-213ENST00000545584 ADAMTSL1Q8N6G6 1762 aa25.48■■□□□ 1.67
CHD4-213ENST00000545584 EYA3Q99504 573 aa25.47■■□□□ 1.67
CHD4-213ENST00000545584 BCL2L13Q9BXK5 485 aa25.47■■□□□ 1.67
CHD4-213ENST00000545584 GPRC5DQ9NZD1 345 aa25.47■■□□□ 1.67
CHD4-213ENST00000545584 CDHR2Q9BYE9 1310 aa25.46■■□□□ 1.67
CHD4-213ENST00000545584 TMEM88BA6NKF7 163 aa25.46■■□□□ 1.67
CHD4-213ENST00000545584 RAD17O75943 681 aa25.46■■□□□ 1.67
CHD4-213ENST00000545584 GPSM2P81274 684 aa25.46■■□□□ 1.67
CHD4-213ENST00000545584 SEC31BQ9NQW1 1179 aa25.46■■□□□ 1.67
CHD4-213ENST00000545584 DUOX1Q9NRD9 1551 aa25.45■■□□□ 1.66
CHD4-213ENST00000545584 G2E3Q7L622 706 aa25.45■■□□□ 1.66
CHD4-213ENST00000545584 ADARB2Q9NS39 739 aaKnown RBP25.45■■□□□ 1.66
CHD4-213ENST00000545584 MKRN1Q9UHC7 482 aaKnown RBP25.45■■□□□ 1.66
CHD4-213ENST00000545584 LTBP1Q14766 1721 aa25.45■■□□□ 1.66
CHD4-213ENST00000545584 IGKV5-2P06315 115 aa25.44■■□□□ 1.66
CHD4-213ENST00000545584 GMPSP49915 693 aaPredicted RBP25.44■■□□□ 1.66
CHD4-213ENST00000545584 FLIIQ13045 1269 aa25.44■■□□□ 1.66
CHD4-213ENST00000545584 CCDC85AQ96PX6 553 aaPredicted RBP25.44■■□□□ 1.66
CHD4-213ENST00000545584 RIMBP2O15034 1052 aa25.43■■□□□ 1.66
CHD4-213ENST00000545584 FKBP5Q13451 457 aaPredicted RBP25.43■■□□□ 1.66
CHD4-213ENST00000545584 POLLQ9UGP5 575 aa25.43■■□□□ 1.66
CHD4-213ENST00000545584 NEURL1BA8MQ27 555 aa25.42■■□□□ 1.66
CHD4-213ENST00000545584 VAMP4O75379 141 aa25.42■■□□□ 1.66
CHD4-213ENST00000545584 EXOSC9Q06265 439 aaKnown RBP25.42■■□□□ 1.66
CHD4-213ENST00000545584 CWF19L2Q2TBE0 894 aaKnown RBP25.42■■□□□ 1.66
CHD4-213ENST00000545584 ANKRD18AQ8IVF6 992 aa25.42■■□□□ 1.66
CHD4-213ENST00000545584 TBC1D16Q8TBP0 767 aa25.42■■□□□ 1.66
CHD4-213ENST00000545584 MYH16Q9H6N6 1097 aa25.42■■□□□ 1.66
CHD4-213ENST00000545584 ANKIB1Q9P2G1 1089 aa25.42■■□□□ 1.66
CHD4-213ENST00000545584 YDJCA8MPS7 323 aa25.41■■□□□ 1.66
CHD4-213ENST00000545584 CTSWP56202 376 aa25.41■■□□□ 1.66
CHD4-213ENST00000545584 CDC5LQ99459 802 aaKnown RBP25.41■■□□□ 1.66
CHD4-213ENST00000545584 ZC3H12CQ9C0D7 883 aaKnown RBP25.41■■□□□ 1.66
CHD4-213ENST00000545584 DBNDD1Q9H9R9 158 aa25.41■■□□□ 1.66
CHD4-213ENST00000545584 COL4A1P02462 1669 aa25.4■■□□□ 1.66
CHD4-213ENST00000545584 G3V3G9 751 aa25.4■■□□□ 1.66
CHD4-213ENST00000545584 DCAF8Q5TAQ9 597 aa25.4■■□□□ 1.66
CHD4-213ENST00000545584 IFFO2Q5TF58 517 aa25.4■■□□□ 1.66
CHD4-213ENST00000545584 PODXL2Q9NZ53 605 aa25.4■■□□□ 1.66
CHD4-213ENST00000545584 GGA1Q9UJY5 639 aa25.4■■□□□ 1.66
CHD4-213ENST00000545584 CNTNAP1P78357 1384 aa25.4■■□□□ 1.66
CHD4-213ENST00000545584 CACNA1FO60840 1977 aa25.39■■□□□ 1.66
CHD4-213ENST00000545584 UFL1O94874 794 aa25.39■■□□□ 1.66
CHD4-213ENST00000545584 DNAAF4Q8WXU2 420 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms