RNA–Protein interactions for RNA: ENST00000545517.2

LRCOL1-204, Transcript of leucine rich colipase like 1, humanhuman

TSL 5

Gene LRCOL1, Length 921 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1-204ENST00000545517 SF3B3Q15393 1217 aaKnown RBP20.8■□□□□ 0.92
LRCOL1-204ENST00000545517 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
LRCOL1-204ENST00000545517 CRAMP1Q96RY5 1269 aa20.8■□□□□ 0.92
LRCOL1-204ENST00000545517 GRM8O00222 908 aa20.79■□□□□ 0.92
LRCOL1-204ENST00000545517 TRIM27P14373 513 aa20.79■□□□□ 0.92
LRCOL1-204ENST00000545517 ALDH1B1P30837 517 aa20.79■□□□□ 0.92
LRCOL1-204ENST00000545517 CTSWP56202 376 aa20.79■□□□□ 0.92
LRCOL1-204ENST00000545517 RASSF7Q02833 373 aa20.79■□□□□ 0.92
LRCOL1-204ENST00000545517 ARHGAP27Q6ZUM4 889 aa20.79■□□□□ 0.92
LRCOL1-204ENST00000545517 C7orf43Q8WVR3 580 aa20.79■□□□□ 0.92
LRCOL1-204ENST00000545517 CCDC85AQ96PX6 553 aaPredicted RBP20.79■□□□□ 0.92
LRCOL1-204ENST00000545517 API5Q9BZZ5 524 aaKnown RBP20.79■□□□□ 0.92
LRCOL1-204ENST00000545517 ARHGAP45Q92619 1136 aa20.78■□□□□ 0.92
LRCOL1-204ENST00000545517 NFKBIEO00221 500 aa20.77■□□□□ 0.92
LRCOL1-204ENST00000545517 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.92
LRCOL1-204ENST00000545517 ATF7IPQ6VMQ6 1270 aa20.77■□□□□ 0.92
LRCOL1-204ENST00000545517 DDX46Q7L014 1031 aaKnown RBP20.77■□□□□ 0.92
LRCOL1-204ENST00000545517 PLA2G12BQ9BX93 195 aa20.77■□□□□ 0.92
LRCOL1-204ENST00000545517 PSME4Q14997 1843 aa20.76■□□□□ 0.91
LRCOL1-204ENST00000545517 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
LRCOL1-204ENST00000545517 HSP90B1P14625 803 aaKnown RBP20.76■□□□□ 0.91
LRCOL1-204ENST00000545517 GRAPQ13588 217 aa20.76■□□□□ 0.91
LRCOL1-204ENST00000545517 GRAPLQ8TC17 118 aaPredicted RBP20.76■□□□□ 0.91
LRCOL1-204ENST00000545517 CELF1Q92879 486 aaKnown RBP20.76■□□□□ 0.91
LRCOL1-204ENST00000545517 SEC31BQ9NQW1 1179 aa20.76■□□□□ 0.91
LRCOL1-204ENST00000545517 C9orf78Q9NZ63 289 aaPredicted RBP20.76■□□□□ 0.91
LRCOL1-204ENST00000545517 UTYO14607 1347 aa20.76■□□□□ 0.91
LRCOL1-204ENST00000545517 RTL9Q8NET4 1388 aa20.75■□□□□ 0.91
LRCOL1-204ENST00000545517 COL4A5P29400 1685 aa20.75■□□□□ 0.91
LRCOL1-204ENST00000545517 PRELPP51888 382 aa20.75■□□□□ 0.91
LRCOL1-204ENST00000545517 CCDC152Q4G0S7 254 aa20.75■□□□□ 0.91
LRCOL1-204ENST00000545517 EPHA10Q5JZY3 1008 aa20.75■□□□□ 0.91
LRCOL1-204ENST00000545517 TTLL11Q8NHH1 800 aa20.75■□□□□ 0.91
LRCOL1-204ENST00000545517 CLUAP1Q96AJ1 413 aa20.75■□□□□ 0.91
LRCOL1-204ENST00000545517 GREM2Q9H772 168 aa20.75■□□□□ 0.91
LRCOL1-204ENST00000545517 CCT4P50991 539 aaKnown RBP20.74■□□□□ 0.91
LRCOL1-204ENST00000545517 FOXO4P98177 505 aa20.74■□□□□ 0.91
LRCOL1-204ENST00000545517 CCDC93Q567U6 631 aa20.74■□□□□ 0.91
LRCOL1-204ENST00000545517 ZKSCAN2Q63HK3 967 aa20.74■□□□□ 0.91
LRCOL1-204ENST00000545517 SUCLG2Q96I99 432 aa20.74■□□□□ 0.91
LRCOL1-204ENST00000545517 RCAN3Q9UKA8 241 aa20.74■□□□□ 0.91
LRCOL1-204ENST00000545517 ZNF646O15015 1829 aaPredicted RBP20.74■□□□□ 0.91
LRCOL1-204ENST00000545517 IPO8O15397 1037 aaKnown RBP20.73■□□□□ 0.91
LRCOL1-204ENST00000545517 FAM161AQ3B820 660 aa20.73■□□□□ 0.91
LRCOL1-204ENST00000545517 KAZALD1Q96I82 304 aa20.73■□□□□ 0.91
LRCOL1-204ENST00000545517 USP44Q9H0E7 712 aa20.73■□□□□ 0.91
LRCOL1-204ENST00000545517 SOGA3Q5TF21 947 aa20.72■□□□□ 0.91
LRCOL1-204ENST00000545517 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
LRCOL1-204ENST00000545517 MYH13Q9UKX3 1938 aa20.72■□□□□ 0.91
LRCOL1-204ENST00000545517 RLBP1P12271 317 aa20.71■□□□□ 0.91
LRCOL1-204ENST00000545517 ATP6V0A2Q9Y487 856 aa20.71■□□□□ 0.91
LRCOL1-204ENST00000545517 SCN9AQ15858 1988 aa20.71■□□□□ 0.91
LRCOL1-204ENST00000545517 LTBP3Q9NS15 1303 aa20.71■□□□□ 0.91
LRCOL1-204ENST00000545517 CSF1RP07333 972 aa20.7■□□□□ 0.9
LRCOL1-204ENST00000545517 TMEM57Q8N5G2 664 aa20.7■□□□□ 0.9
LRCOL1-204ENST00000545517 TAOK3Q9H2K8 898 aa20.7■□□□□ 0.9
LRCOL1-204ENST00000545517 BBOX1O75936 387 aa20.69■□□□□ 0.9
LRCOL1-204ENST00000545517 LMBR1LQ6UX01 489 aa20.69■□□□□ 0.9
LRCOL1-204ENST00000545517 MEIS3Q99687 375 aa20.69■□□□□ 0.9
LRCOL1-204ENST00000545517 BICC1Q9H694 974 aaKnown RBP20.69■□□□□ 0.9
LRCOL1-204ENST00000545517 ITGA6P23229 1130 aa20.68■□□□□ 0.9
LRCOL1-204ENST00000545517 YY1P25490 414 aa20.68■□□□□ 0.9
LRCOL1-204ENST00000545517 RPS8P62241 208 aaKnown RBP20.68■□□□□ 0.9
LRCOL1-204ENST00000545517 FKBP4Q02790 459 aaKnown RBP eCLIP20.68■□□□□ 0.9
LRCOL1-204ENST00000545517 C9orf131Q5VYM1 1079 aa20.68■□□□□ 0.9
LRCOL1-204ENST00000545517 ANKRD44Q8N8A2 993 aa20.68■□□□□ 0.9
LRCOL1-204ENST00000545517 RNF181Q9P0P0 153 aa20.68■□□□□ 0.9
LRCOL1-204ENST00000545517 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
LRCOL1-204ENST00000545517 PLIN1O60240 522 aa20.67■□□□□ 0.9
LRCOL1-204ENST00000545517 SP8Q8IXZ3 490 aa20.67■□□□□ 0.9
LRCOL1-204ENST00000545517 RTKN2Q8IZC4 609 aa20.67■□□□□ 0.9
LRCOL1-204ENST00000545517 LMNB1P20700 586 aa20.66■□□□□ 0.9
LRCOL1-204ENST00000545517 CC2D2BQ6DHV5 1058 aa20.66■□□□□ 0.9
LRCOL1-204ENST00000545517 TMC4Q7Z404 712 aa20.66■□□□□ 0.9
LRCOL1-204ENST00000545517 ANKRD18AQ8IVF6 992 aa20.66■□□□□ 0.9
LRCOL1-204ENST00000545517 FTSJ3Q8IY81 847 aaKnown RBP20.66■□□□□ 0.9
LRCOL1-204ENST00000545517 DZIP1LQ8IYY4 767 aaKnown RBP20.66■□□□□ 0.9
LRCOL1-204ENST00000545517 CDC5LQ99459 802 aaKnown RBP20.66■□□□□ 0.9
LRCOL1-204ENST00000545517 ZNF277Q9NRM2 450 aaPredicted RBP20.66■□□□□ 0.9
LRCOL1-204ENST00000545517 ARAP2Q8WZ64 1704 aa20.65■□□□□ 0.9
LRCOL1-204ENST00000545517 UBTFL1P0CB47 393 aaPredicted RBP20.65■□□□□ 0.9
LRCOL1-204ENST00000545517 RABL6Q3YEC7 729 aaPredicted RBP20.65■□□□□ 0.9
LRCOL1-204ENST00000545517 PANK1Q8TE04 598 aa20.65■□□□□ 0.9
LRCOL1-204ENST00000545517 PSMD1Q99460 953 aa20.64■□□□□ 0.89
LRCOL1-204ENST00000545517 ANKRD18BA2A2Z9 1011 aa20.63■□□□□ 0.89
LRCOL1-204ENST00000545517 GPSM2P81274 684 aa20.63■□□□□ 0.89
LRCOL1-204ENST00000545517 ITPRIPQ8IWB1 547 aa20.63■□□□□ 0.89
LRCOL1-204ENST00000545517 ZNF594Q96JF6 807 aaPredicted RBP20.63■□□□□ 0.89
LRCOL1-204ENST00000545517 LRRFIP2Q9Y608 721 aaKnown RBP20.63■□□□□ 0.89
LRCOL1-204ENST00000545517 WDR90Q96KV7 1748 aa20.63■□□□□ 0.89
LRCOL1-204ENST00000545517 SCN4AP35499 1836 aa20.62■□□□□ 0.89
LRCOL1-204ENST00000545517 IFIT5Q13325 482 aaKnown RBP20.62■□□□□ 0.89
LRCOL1-204ENST00000545517 DPP8Q6V1X1 898 aaPredicted RBP20.62■□□□□ 0.89
LRCOL1-204ENST00000545517 MPNDQ8N594 471 aa20.62■□□□□ 0.89
LRCOL1-204ENST00000545517 IGHMBP2P38935 993 aaKnown RBP20.61■□□□□ 0.89
LRCOL1-204ENST00000545517 IARSP41252 1262 aaKnown RBP20.61■□□□□ 0.89
LRCOL1-204ENST00000545517 GRIPAP1Q4V328 841 aa20.61■□□□□ 0.89
LRCOL1-204ENST00000545517 RTFDC1Q9BY42 306 aaPredicted RBP20.61■□□□□ 0.89
LRCOL1-204ENST00000545517 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
LRCOL1-204ENST00000545517 CCDC57Q2TAC2 916 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms