RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 TEX13AQ9BXU3 409 aaPredicted RBP22.52■■□□□ 1.2
MSLN-202ENST00000545450 HDAC5Q9UQL6 1122 aa22.52■■□□□ 1.2
MSLN-202ENST00000545450 SPATA31A6Q5VVP1 1343 aa22.52■■□□□ 1.2
MSLN-202ENST00000545450 HSPA4P34932 840 aa22.52■■□□□ 1.2
MSLN-202ENST00000545450 VPS72Q15906 364 aa22.52■■□□□ 1.2
MSLN-202ENST00000545450 FAM98CQ17RN3 349 aaKnown RBP22.51■■□□□ 1.19
MSLN-202ENST00000545450 FNBP4Q8N3X1 1017 aaPredicted RBP22.51■■□□□ 1.19
MSLN-202ENST00000545450 MYRIPQ8NFW9 859 aa22.51■■□□□ 1.19
MSLN-202ENST00000545450 ACSBG1Q96GR2 724 aa22.51■■□□□ 1.19
MSLN-202ENST00000545450 FOXD4L6Q3SYB3 417 aaPredicted RBP22.5■■□□□ 1.19
MSLN-202ENST00000545450 CCDC183Q5T5S1 534 aa22.5■■□□□ 1.19
MSLN-202ENST00000545450 FOXD4L3Q6VB84 417 aaPredicted RBP22.5■■□□□ 1.19
MSLN-202ENST00000545450 PIBF1Q8WXW3 757 aa22.5■■□□□ 1.19
MSLN-202ENST00000545450 RPAP1Q9BWH6 1393 aaPredicted RBP22.5■■□□□ 1.19
MSLN-202ENST00000545450 RAB11FIP3O75154 756 aa22.5■■□□□ 1.19
MSLN-202ENST00000545450 JARID2Q92833 1246 aaPredicted RBP22.5■■□□□ 1.19
MSLN-202ENST00000545450 ZBTB3Q9H5J0 574 aa22.5■■□□□ 1.19
MSLN-202ENST00000545450 LETM1O95202 739 aaPredicted RBP22.49■■□□□ 1.19
MSLN-202ENST00000545450 IL25Q9H293 177 aa22.49■■□□□ 1.19
MSLN-202ENST00000545450 IL1RAPL2Q9NP60 686 aa22.49■■□□□ 1.19
MSLN-202ENST00000545450 STARD3NLO95772 234 aa22.49■■□□□ 1.19
MSLN-202ENST00000545450 EPHA10Q5JZY3 1008 aa22.49■■□□□ 1.19
MSLN-202ENST00000545450 RHPN1Q8TCX5 695 aa22.49■■□□□ 1.19
MSLN-202ENST00000545450 PRIMPOLQ96LW4 560 aa22.48■■□□□ 1.19
MSLN-202ENST00000545450 A0A0G2JS52 829 aa22.48■■□□□ 1.19
MSLN-202ENST00000545450 USP25Q9UHP3 1055 aa22.48■■□□□ 1.19
MSLN-202ENST00000545450 PRDM4Q9UKN5 801 aa22.48■■□□□ 1.19
MSLN-202ENST00000545450 PA2G4Q9UQ80 394 aaKnown RBP22.48■■□□□ 1.19
MSLN-202ENST00000545450 ZNF330Q9Y3S2 320 aaPredicted RBP22.48■■□□□ 1.19
MSLN-202ENST00000545450 CYP19A1P11511 503 aaPredicted RBP22.47■■□□□ 1.19
MSLN-202ENST00000545450 UBE3BQ7Z3V4 1068 aa22.47■■□□□ 1.19
MSLN-202ENST00000545450 KLHL34Q8N239 644 aa22.47■■□□□ 1.19
MSLN-202ENST00000545450 A0A087WZG4 1122 aa22.46■■□□□ 1.19
MSLN-202ENST00000545450 HSPA1LP34931 641 aa22.46■■□□□ 1.19
MSLN-202ENST00000545450 CASP7P55210 303 aa22.46■■□□□ 1.19
MSLN-202ENST00000545450 NOLC1Q14978 699 aaKnown RBP eCLIP22.46■■□□□ 1.19
MSLN-202ENST00000545450 KIF1BPQ96EK5 621 aa22.46■■□□□ 1.19
MSLN-202ENST00000545450 ZSCAN22P10073 491 aaPredicted RBP22.46■■□□□ 1.19
MSLN-202ENST00000545450 USP21Q9UK80 565 aa22.46■■□□□ 1.19
MSLN-202ENST00000545450 ADCY5O95622 1261 aa22.45■■□□□ 1.18
MSLN-202ENST00000545450 UBE2HP62256 183 aa22.45■■□□□ 1.18
MSLN-202ENST00000545450 TTC14Q96N46 770 aa22.45■■□□□ 1.18
MSLN-202ENST00000545450 CNPY2Q9Y2B0 182 aa22.45■■□□□ 1.18
MSLN-202ENST00000545450 COL15A1P39059 1388 aa22.45■■□□□ 1.18
MSLN-202ENST00000545450 GTF2F1P35269 517 aaKnown RBP eCLIP22.45■■□□□ 1.18
MSLN-202ENST00000545450 HSP90AB4PQ58FF6 505 aa22.45■■□□□ 1.18
MSLN-202ENST00000545450 SMAP1Q8IYB5 467 aaPredicted RBP22.45■■□□□ 1.18
MSLN-202ENST00000545450 HMGN5P82970 282 aaKnown RBP22.44■■□□□ 1.18
MSLN-202ENST00000545450 DNTTIP2Q5QJE6 756 aaKnown RBP22.44■■□□□ 1.18
MSLN-202ENST00000545450 ZNF830Q96NB3 372 aaPredicted RBP22.44■■□□□ 1.18
MSLN-202ENST00000545450 SPTLC3Q9NUV7 552 aa22.44■■□□□ 1.18
MSLN-202ENST00000545450 RAD50Q92878 1312 aa22.44■■□□□ 1.18
MSLN-202ENST00000545450 ZBTB1Q9Y2K1 713 aa22.43■■□□□ 1.18
MSLN-202ENST00000545450 NUTM1Q86Y26 1132 aa22.43■■□□□ 1.18
MSLN-202ENST00000545450 CWC25Q9NXE8 425 aaPredicted RBP22.43■■□□□ 1.18
MSLN-202ENST00000545450 SNX14Q9Y5W7 946 aa22.43■■□□□ 1.18
MSLN-202ENST00000545450 THSD7AQ9UPZ6 1657 aa22.43■■□□□ 1.18
MSLN-202ENST00000545450 SGSM2O43147 1006 aa22.42■■□□□ 1.18
MSLN-202ENST00000545450 HCLS1P14317 486 aaPredicted RBP22.42■■□□□ 1.18
MSLN-202ENST00000545450 OS9Q13438 667 aaPredicted RBP22.42■■□□□ 1.18
MSLN-202ENST00000545450 H7C1W4 665 aa22.42■■□□□ 1.18
MSLN-202ENST00000545450 KCNQ2O43526 872 aa22.42■■□□□ 1.18
MSLN-202ENST00000545450 KDM4AO75164 1064 aa22.42■■□□□ 1.18
MSLN-202ENST00000545450 CCDC94Q9BW85 323 aaPredicted RBP22.42■■□□□ 1.18
MSLN-202ENST00000545450 TTC12Q9H892 705 aaPredicted RBP22.42■■□□□ 1.18
MSLN-202ENST00000545450 CICQ96RK0 1608 aaPredicted RBP22.41■■□□□ 1.18
MSLN-202ENST00000545450 STX6O43752 255 aa22.41■■□□□ 1.18
MSLN-202ENST00000545450 SYT1P21579 422 aa22.41■■□□□ 1.18
MSLN-202ENST00000545450 RABL6Q3YEC7 729 aaPredicted RBP22.41■■□□□ 1.18
MSLN-202ENST00000545450 FUCA2Q9BTY2 467 aa22.41■■□□□ 1.18
MSLN-202ENST00000545450 LIMCH1Q9UPQ0 1083 aa22.41■■□□□ 1.18
MSLN-202ENST00000545450 KIF6Q6ZMV9 814 aa22.4■■□□□ 1.18
MSLN-202ENST00000545450 MPNDQ8N594 471 aa22.4■■□□□ 1.18
MSLN-202ENST00000545450 CCDC191Q8NCU4 936 aa22.4■■□□□ 1.18
MSLN-202ENST00000545450 KLHDC4Q8TBB5 520 aa22.4■■□□□ 1.18
MSLN-202ENST00000545450 PI4K2BQ8TCG2 481 aa22.4■■□□□ 1.18
MSLN-202ENST00000545450 ISCA1Q9BUE6 129 aa22.4■■□□□ 1.18
MSLN-202ENST00000545450 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.4■■□□□ 1.18
MSLN-202ENST00000545450 ANKRD36CQ5JPF3 1778 aa22.4■■□□□ 1.18
MSLN-202ENST00000545450 RUFY3Q7L099 469 aa22.4■■□□□ 1.18
MSLN-202ENST00000545450 LSG1Q9H089 658 aaKnown RBP22.4■■□□□ 1.18
MSLN-202ENST00000545450 NUP98P52948 1817 aa22.4■■□□□ 1.18
MSLN-202ENST00000545450 MYH14Q7Z406 1995 aaKnown RBP22.4■■□□□ 1.18
MSLN-202ENST00000545450 F13A1P00488 732 aa22.39■■□□□ 1.18
MSLN-202ENST00000545450 AK2P54819 239 aa22.39■■□□□ 1.18
MSLN-202ENST00000545450 TCIRG1Q13488 830 aa22.39■■□□□ 1.18
MSLN-202ENST00000545450 ATP6V1DQ9Y5K8 247 aa22.39■■□□□ 1.18
MSLN-202ENST00000545450 MAP3K15Q6ZN16 1313 aa22.39■■□□□ 1.17
MSLN-202ENST00000545450 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
MSLN-202ENST00000545450 RREB1Q92766 1687 aa22.38■■□□□ 1.17
MSLN-202ENST00000545450 RFX5P48382 616 aaPredicted RBP22.38■■□□□ 1.17
MSLN-202ENST00000545450 MEX3CQ5U5Q3 659 aaKnown RBP22.38■■□□□ 1.17
MSLN-202ENST00000545450 ERC1Q8IUD2 1116 aa22.38■■□□□ 1.17
MSLN-202ENST00000545450 RASEFQ8IZ41 740 aa22.38■■□□□ 1.17
MSLN-202ENST00000545450 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.38■■□□□ 1.17
MSLN-202ENST00000545450 LOC102724428A0A0B4J2F2 783 aa22.38■■□□□ 1.17
MSLN-202ENST00000545450 SASH1O94885 1247 aa22.38■■□□□ 1.17
MSLN-202ENST00000545450 SIK1P57059 783 aa22.38■■□□□ 1.17
MSLN-202ENST00000545450 ZNF710Q8N1W2 664 aa22.38■■□□□ 1.17
MSLN-202ENST00000545450 SIL1Q9H173 461 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms