RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TMX4Q9H1E5 349 aaPredicted RBP19.54■□□□□ 0.72
RTN3-214ENST00000545432 KDM3BQ7LBC6 1761 aa19.54■□□□□ 0.72
RTN3-214ENST00000545432 CASP8AP2Q9UKL3 1982 aa19.53■□□□□ 0.72
RTN3-214ENST00000545432 MPNDQ8N594 471 aa19.53■□□□□ 0.72
RTN3-214ENST00000545432 CCER1Q8TC90 406 aaPredicted RBP19.53■□□□□ 0.72
RTN3-214ENST00000545432 TRPM4Q8TD43 1214 aa19.53■□□□□ 0.72
RTN3-214ENST00000545432 DPF2Q92785 391 aa19.53■□□□□ 0.72
RTN3-214ENST00000545432 UTP14AQ9BVJ6 771 aaKnown RBP19.53■□□□□ 0.72
RTN3-214ENST00000545432 PDE4DIPQ5VU43 2346 aa19.52■□□□□ 0.72
RTN3-214ENST00000545432 YDJCA8MPS7 323 aa19.52■□□□□ 0.72
RTN3-214ENST00000545432 FAM155AB1AL88 458 aaPredicted RBP19.52■□□□□ 0.72
RTN3-214ENST00000545432 DGKZQ13574 1117 aa19.52■□□□□ 0.72
RTN3-214ENST00000545432 DPP8Q6V1X1 898 aaPredicted RBP19.52■□□□□ 0.72
RTN3-214ENST00000545432 CNOT7Q9UIV1 285 aaKnown RBP19.52■□□□□ 0.72
RTN3-214ENST00000545432 SAGE1Q9NXZ1 904 aa19.51■□□□□ 0.71
RTN3-214ENST00000545432 RAD17O75943 681 aa19.5■□□□□ 0.71
RTN3-214ENST00000545432 GRAPQ13588 217 aa19.49■□□□□ 0.71
RTN3-214ENST00000545432 TMC4Q7Z404 712 aa19.49■□□□□ 0.71
RTN3-214ENST00000545432 GRAPLQ8TC17 118 aaPredicted RBP19.49■□□□□ 0.71
RTN3-214ENST00000545432 BCL2L13Q9BXK5 485 aa19.49■□□□□ 0.71
RTN3-214ENST00000545432 SHTN1A0MZ66 631 aa19.48■□□□□ 0.71
RTN3-214ENST00000545432 H7C1D1 291 aa19.48■□□□□ 0.71
RTN3-214ENST00000545432 HUNKP57058 714 aa19.48■□□□□ 0.71
RTN3-214ENST00000545432 NFE2L2Q16236 605 aa19.48■□□□□ 0.71
RTN3-214ENST00000545432 USP48Q86UV5 1035 aa19.48■□□□□ 0.71
RTN3-214ENST00000545432 NLRP10Q86W26 655 aa19.48■□□□□ 0.71
RTN3-214ENST00000545432 RGMBQ6NW40 437 aa19.47■□□□□ 0.71
RTN3-214ENST00000545432 BABAM1Q9NWV8 329 aa19.47■□□□□ 0.71
RTN3-214ENST00000545432 DUOX1Q9NRD9 1551 aa19.46■□□□□ 0.71
RTN3-214ENST00000545432 HSP90AB3PQ58FF7 597 aa19.46■□□□□ 0.71
RTN3-214ENST00000545432 MICALL2Q8IY33 904 aa19.46■□□□□ 0.71
RTN3-214ENST00000545432 CCDC102AQ96A19 550 aa19.46■□□□□ 0.71
RTN3-214ENST00000545432 THUMPD2Q9BTF0 503 aaKnown RBP19.46■□□□□ 0.71
RTN3-214ENST00000545432 ZNF408Q9H9D4 720 aa19.46■□□□□ 0.71
RTN3-214ENST00000545432 HCLS1P14317 486 aaPredicted RBP19.45■□□□□ 0.7
RTN3-214ENST00000545432 DLK2Q6UY11 383 aa19.45■□□□□ 0.7
RTN3-214ENST00000545432 DDX46Q7L014 1031 aaKnown RBP19.45■□□□□ 0.7
RTN3-214ENST00000545432 GBA2Q9HCG7 927 aaPredicted RBP19.45■□□□□ 0.7
RTN3-214ENST00000545432 ANKRD36CQ5JPF3 1778 aa19.44■□□□□ 0.7
RTN3-214ENST00000545432 RPS12P25398 132 aaKnown RBP19.44■□□□□ 0.7
RTN3-214ENST00000545432 TCIRG1Q13488 830 aa19.44■□□□□ 0.7
RTN3-214ENST00000545432 PROSER3Q2NL68 480 aa19.44■□□□□ 0.7
RTN3-214ENST00000545432 ZBTB12Q9Y330 459 aaPredicted RBP19.44■□□□□ 0.7
RTN3-214ENST00000545432 DLG5Q8TDM6 1919 aa19.43■□□□□ 0.7
RTN3-214ENST00000545432 PSMD14O00487 310 aa19.43■□□□□ 0.7
RTN3-214ENST00000545432 NEFMP07197 916 aa19.43■□□□□ 0.7
RTN3-214ENST00000545432 KIF23Q02241 960 aaPredicted RBP19.43■□□□□ 0.7
RTN3-214ENST00000545432 SAMD7Q7Z3H4 446 aa19.43■□□□□ 0.7
RTN3-214ENST00000545432 CFAP44Q96MT7 982 aa19.43■□□□□ 0.7
RTN3-214ENST00000545432 RNF186Q9NXI6 227 aa19.43■□□□□ 0.7
RTN3-214ENST00000545432 SH3TC1Q8TE82 1336 aa19.43■□□□□ 0.7
RTN3-214ENST00000545432 EGFRP00533 1210 aa19.42■□□□□ 0.7
RTN3-214ENST00000545432 SF3B3Q15393 1217 aaKnown RBP19.42■□□□□ 0.7
RTN3-214ENST00000545432 COPS6Q7L5N1 327 aa19.42■□□□□ 0.7
RTN3-214ENST00000545432 KRT26Q7Z3Y9 468 aa19.42■□□□□ 0.7
RTN3-214ENST00000545432 C2orf69Q8N8R5 385 aa19.42■□□□□ 0.7
RTN3-214ENST00000545432 WASHC4Q2M389 1173 aa19.41■□□□□ 0.7
RTN3-214ENST00000545432 CSRNP1Q96S65 589 aa19.41■□□□□ 0.7
RTN3-214ENST00000545432 TRMT112Q9UI30 125 aaKnown RBP19.41■□□□□ 0.7
RTN3-214ENST00000545432 TNRC18O15417 2968 aaPredicted RBP19.41■□□□□ 0.7
RTN3-214ENST00000545432 ANXA1P04083 346 aa19.4■□□□□ 0.7
RTN3-214ENST00000545432 SLC10A3P09131 477 aa19.4■□□□□ 0.7
RTN3-214ENST00000545432 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
RTN3-214ENST00000545432 REM2Q8IYK8 340 aaPredicted RBP19.4■□□□□ 0.7
RTN3-214ENST00000545432 PNNQ9H307 717 aaKnown RBP19.4■□□□□ 0.7
RTN3-214ENST00000545432 TSPYL4Q9UJ04 414 aa19.4■□□□□ 0.7
RTN3-214ENST00000545432 LRRC37AA6NMS7 1700 aa19.39■□□□□ 0.7
RTN3-214ENST00000545432 LAMB2P55268 1798 aa19.39■□□□□ 0.7
RTN3-214ENST00000545432 VIL1P09327 827 aaKnown RBP19.39■□□□□ 0.69
RTN3-214ENST00000545432 TBC1D10BQ4KMP7 808 aaPredicted RBP19.39■□□□□ 0.69
RTN3-214ENST00000545432 XAGE3Q8WTP9 111 aa19.39■□□□□ 0.69
RTN3-214ENST00000545432 POLLQ9UGP5 575 aa19.39■□□□□ 0.69
RTN3-214ENST00000545432 RTL9Q8NET4 1388 aa19.39■□□□□ 0.69
RTN3-214ENST00000545432 TRPA1O75762 1119 aa19.38■□□□□ 0.69
RTN3-214ENST00000545432 ZNF157P51786 506 aaPredicted RBP19.38■□□□□ 0.69
RTN3-214ENST00000545432 CELF1Q92879 486 aaKnown RBP19.38■□□□□ 0.69
RTN3-214ENST00000545432 DCPSQ96C86 337 aaKnown RBP19.38■□□□□ 0.69
RTN3-214ENST00000545432 KCNQ5Q9NR82 932 aa19.38■□□□□ 0.69
RTN3-214ENST00000545432 ZNF609O15014 1411 aa19.37■□□□□ 0.69
RTN3-214ENST00000545432 ADM5C9JUS6 153 aa19.37■□□□□ 0.69
RTN3-214ENST00000545432 ISCA1Q9BUE6 129 aa19.37■□□□□ 0.69
RTN3-214ENST00000545432 DBNDD1Q9H9R9 158 aa19.37■□□□□ 0.69
RTN3-214ENST00000545432 POLR2AP24928 1970 aaKnown RBP19.37■□□□□ 0.69
RTN3-214ENST00000545432 PRPF38BQ5VTL8 546 aaKnown RBP19.36■□□□□ 0.69
RTN3-214ENST00000545432 CTU1Q7Z7A3 348 aaKnown RBP19.36■□□□□ 0.69
RTN3-214ENST00000545432 PODXL2Q9NZ53 605 aa19.36■□□□□ 0.69
RTN3-214ENST00000545432 NSFL1CQ9UNZ2 370 aaKnown RBP19.36■□□□□ 0.69
RTN3-214ENST00000545432 FKBP1BP68106 108 aa19.35■□□□□ 0.69
RTN3-214ENST00000545432 GPSM2P81274 684 aa19.35■□□□□ 0.69
RTN3-214ENST00000545432 TRIM28Q13263 835 aaKnown RBP19.35■□□□□ 0.69
RTN3-214ENST00000545432 ECE2O60344 883 aa19.34■□□□□ 0.69
RTN3-214ENST00000545432 SOX10P56693 466 aa19.34■□□□□ 0.69
RTN3-214ENST00000545432 ZNF280AP59817 542 aaPredicted RBP19.34■□□□□ 0.69
RTN3-214ENST00000545432 AIMP1Q12904 312 aaKnown RBP19.34■□□□□ 0.69
RTN3-214ENST00000545432 KIF4BQ2VIQ3 1234 aa19.34■□□□□ 0.69
RTN3-214ENST00000545432 PLBD2Q8NHP8 589 aa19.34■□□□□ 0.69
RTN3-214ENST00000545432 TBC1D16Q8TBP0 767 aa19.34■□□□□ 0.69
RTN3-214ENST00000545432 NECTIN2Q92692 538 aa19.34■□□□□ 0.69
RTN3-214ENST00000545432 EYA3Q99504 573 aa19.34■□□□□ 0.69
RTN3-214ENST00000545432 TAF1P21675 1872 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms