RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 GRM8O00222 908 aa6.76□□□□□ -1.33
NPIPB3-214ENST00000545358 DDB1Q16531 1140 aa6.76□□□□□ -1.33
NPIPB3-214ENST00000545358 RIC3Q7Z5B4 369 aa6.76□□□□□ -1.33
NPIPB3-214ENST00000545358 UNC5CLQ8IV45 518 aa6.76□□□□□ -1.33
NPIPB3-214ENST00000545358 PLBD2Q8NHP8 589 aa6.76□□□□□ -1.33
NPIPB3-214ENST00000545358 DDX12PQ92771 950 aa6.76□□□□□ -1.33
NPIPB3-214ENST00000545358 METTL22Q9BUU2 404 aaPredicted RBP6.76□□□□□ -1.33
NPIPB3-214ENST00000545358 UPF2Q9HAU5 1272 aaKnown RBP6.76□□□□□ -1.33
NPIPB3-214ENST00000545358 AOX1Q06278 1338 aa6.76□□□□□ -1.33
NPIPB3-214ENST00000545358 BCL9LQ86UU0 1499 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 PNMA6EA0A0J9YXQ4 647 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 NUTM2BA6NNL0 878 aaPredicted RBP6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 NEURL1BA8MQ27 555 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 NUTM2EB1AL46 878 aaPredicted RBP6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 RAB11FIP3O75154 756 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 MYL6BP14649 208 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 AIMP1Q12904 312 aaKnown RBP6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 NBR1Q14596 966 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 VPS72Q15906 364 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 HSP90AB4PQ58FF6 505 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 DMRTA1Q5VZB9 504 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 COPS6Q7L5N1 327 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 NUTM2AQ8IVF1 878 aaPredicted RBP6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 PLEKHM2Q8IWE5 1019 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 CERKQ8TCT0 537 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 PIGBQ92521 554 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 LRRCC1Q9C099 1032 aa6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 C9orf78Q9NZ63 289 aaPredicted RBP6.75□□□□□ -1.33
NPIPB3-214ENST00000545358 ANKRD36CQ5JPF3 1778 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 NHSQ6T4R5 1651 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 IGKV5-2P06315 115 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 NBPF7P0C2Y1 421 aaPredicted RBP6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 EN1Q05925 392 aaPredicted RBP6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 CWF19L2Q2TBE0 894 aaKnown RBP6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 C6orf132Q5T0Z8 1188 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 TTC22Q5TAA0 569 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 PPP1R42Q7Z4L9 355 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 NPM2Q86SE8 214 aaKnown RBP6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 FNBP4Q8N3X1 1017 aaPredicted RBP6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 RNF166Q96A37 237 aaPredicted RBP6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 MYD88Q99836 296 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 OSBPL3Q9H4L5 887 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 ATG3Q9NT62 314 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 VPS9D1Q9Y2B5 631 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 SALL3Q9BXA9 1300 aa6.74□□□□□ -1.33
NPIPB3-214ENST00000545358 NBPF26B4DH59 902 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 SRGAP3O43295 1099 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 ONECUT3O60422 494 aaPredicted RBP6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 PTCD1O75127 700 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 CDC45O75419 566 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 STARD3NLO95772 234 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 GCKRQ14397 625 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 NBPF14Q5TI25 921 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 NBPF10Q6P3W6 841 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 ERC1Q8IUD2 1116 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 NBPF15Q8N660 670 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 KIF1BPQ96EK5 621 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 SUCLG2Q96I99 432 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 TBC1D32Q96NH3 1257 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 C8orf37Q96NL8 207 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 ZBED2Q9BTP6 218 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 NBPF3Q9H094 633 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 ASAP1Q9ULH1 1129 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 EXOC6BQ9Y2D4 811 aa6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 NOP58Q9Y2X3 529 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 COL5A3P25940 1745 aaPredicted RBP6.73□□□□□ -1.33
NPIPB3-214ENST00000545358 GRXCR2A6NFK2 248 aa6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 MAP3K7O43318 606 aa6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 HRO43593 1189 aa6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 A1BGP04217 495 aa6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 GSPT1P15170 499 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 RABL6Q3YEC7 729 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 KIF6Q6ZMV9 814 aa6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 DNAJC10Q8IXB1 793 aa6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 MARCH10Q8NA82 808 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 BICC1Q9H694 974 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 STAP2Q9UGK3 403 aa6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 CCDC9Q9Y3X0 531 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 ATRNO75882 1429 aa6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 USP42Q9H9J4 1324 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 BCORQ6W2J9 1755 aa6.72□□□□□ -1.33
NPIPB3-214ENST00000545358 SMARCA5O60264 1052 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 SURF6O75683 361 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 MX1P20591 662 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 PIP4K2AP48426 406 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 PRIM1P49642 420 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 PDE1AP54750 535 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 HSP90AB3PQ58FF7 597 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 CASC1Q6TDU7 716 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 TBC1D9Q6ZT07 1266 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 ERICH6Q7L0X2 663 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 CCDC191Q8NCU4 936 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 RHPN1Q8TCX5 695 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 SMARCC1Q92922 1105 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 NGLY1Q96IV0 654 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 CWC25Q9NXE8 425 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 RABGEF1Q9UJ41 708 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 MAP3K15Q6ZN16 1313 aa6.71□□□□□ -1.34
NPIPB3-214ENST00000545358 PALLDQ8WX93 1383 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms