RNA–Protein interactions for RNA: ENST00000545331.5

TULP3-208, Transcript of tubby like protein 3, humanhuman

TSL 2

Gene TULP3, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-208ENST00000545331 CCDC93Q567U6 631 aa23.25■■□□□ 1.31
TULP3-208ENST00000545331 GRAPLQ8TC17 118 aaPredicted RBP23.25■■□□□ 1.31
TULP3-208ENST00000545331 LTBP3Q9NS15 1303 aa23.24■■□□□ 1.31
TULP3-208ENST00000545331 CTSWP56202 376 aa23.24■■□□□ 1.31
TULP3-208ENST00000545331 C9orf78Q9NZ63 289 aaPredicted RBP23.24■■□□□ 1.31
TULP3-208ENST00000545331 PPEF1O14829 653 aaPredicted RBP23.23■■□□□ 1.31
TULP3-208ENST00000545331 CCT4P50991 539 aaKnown RBP23.23■■□□□ 1.31
TULP3-208ENST00000545331 RTL9Q8NET4 1388 aa23.22■■□□□ 1.31
TULP3-208ENST00000545331 BCAR3O75815 825 aa23.22■■□□□ 1.31
TULP3-208ENST00000545331 RTKN2Q8IZC4 609 aa23.22■■□□□ 1.31
TULP3-208ENST00000545331 JARID2Q92833 1246 aaPredicted RBP23.22■■□□□ 1.31
TULP3-208ENST00000545331 TMX4Q9H1E5 349 aaPredicted RBP23.22■■□□□ 1.31
TULP3-208ENST00000545331 UTYO14607 1347 aa23.22■■□□□ 1.31
TULP3-208ENST00000545331 ATF7IPQ6VMQ6 1270 aa23.21■■□□□ 1.31
TULP3-208ENST00000545331 ZNF219Q9P2Y4 722 aaPredicted RBP23.21■■□□□ 1.31
TULP3-208ENST00000545331 NFKBIEO00221 500 aa23.2■■□□□ 1.3
TULP3-208ENST00000545331 YY1P25490 414 aa23.2■■□□□ 1.3
TULP3-208ENST00000545331 TTLL11Q8NHH1 800 aa23.2■■□□□ 1.3
TULP3-208ENST00000545331 TAOK3Q9H2K8 898 aa23.2■■□□□ 1.3
TULP3-208ENST00000545331 ATP6V0A2Q9Y487 856 aa23.2■■□□□ 1.3
TULP3-208ENST00000545331 SNED1Q8TER0 1413 aa23.2■■□□□ 1.3
TULP3-208ENST00000545331 SBF1O95248 1867 aa23.19■■□□□ 1.3
TULP3-208ENST00000545331 LMNB1P20700 586 aa23.18■■□□□ 1.3
TULP3-208ENST00000545331 ZKSCAN2Q63HK3 967 aa23.18■■□□□ 1.3
TULP3-208ENST00000545331 SP8Q8IXZ3 490 aa23.18■■□□□ 1.3
TULP3-208ENST00000545331 FRAT1Q92837 279 aaPredicted RBP23.18■■□□□ 1.3
TULP3-208ENST00000545331 CSF1RP07333 972 aa23.17■■□□□ 1.3
TULP3-208ENST00000545331 TRIM27P14373 513 aa23.17■■□□□ 1.3
TULP3-208ENST00000545331 FKBP4Q02790 459 aaKnown RBP eCLIP23.17■■□□□ 1.3
TULP3-208ENST00000545331 CDC5LQ99459 802 aaKnown RBP23.17■■□□□ 1.3
TULP3-208ENST00000545331 PSMD1Q99460 953 aa23.17■■□□□ 1.3
TULP3-208ENST00000545331 LRRC37AA6NMS7 1700 aa23.17■■□□□ 1.3
TULP3-208ENST00000545331 ZC3H4Q9UPT8 1303 aaKnown RBP23.16■■□□□ 1.3
TULP3-208ENST00000545331 RPS8P62241 208 aaKnown RBP23.16■■□□□ 1.3
TULP3-208ENST00000545331 RASSF7Q02833 373 aa23.16■■□□□ 1.3
TULP3-208ENST00000545331 INTS3Q68E01 1043 aaKnown RBP23.16■■□□□ 1.3
TULP3-208ENST00000545331 CELF1Q92879 486 aaKnown RBP23.16■■□□□ 1.3
TULP3-208ENST00000545331 TAF1P21675 1872 aa23.15■■□□□ 1.3
TULP3-208ENST00000545331 NBPF7P0C2Y1 421 aaPredicted RBP23.14■■□□□ 1.3
TULP3-208ENST00000545331 C9orf131Q5VYM1 1079 aa23.14■■□□□ 1.3
TULP3-208ENST00000545331 ANKRD18AQ8IVF6 992 aa23.14■■□□□ 1.3
TULP3-208ENST00000545331 USP44Q9H0E7 712 aa23.14■■□□□ 1.3
TULP3-208ENST00000545331 GREM2Q9H772 168 aa23.14■■□□□ 1.3
TULP3-208ENST00000545331 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.3
TULP3-208ENST00000545331 HDAC5Q9UQL6 1122 aa23.14■■□□□ 1.3
TULP3-208ENST00000545331 FOXO4P98177 505 aa23.14■■□□□ 1.29
TULP3-208ENST00000545331 OLFM4Q6UX06 510 aa23.14■■□□□ 1.29
TULP3-208ENST00000545331 YTHDC1Q96MU7 727 aaKnown RBP23.14■■□□□ 1.29
TULP3-208ENST00000545331 RNF181Q9P0P0 153 aa23.14■■□□□ 1.29
TULP3-208ENST00000545331 RCAN3Q9UKA8 241 aa23.14■■□□□ 1.29
TULP3-208ENST00000545331 DICER1Q9UPY3 1922 aaKnown RBP23.13■■□□□ 1.29
TULP3-208ENST00000545331 CCDC85AQ96PX6 553 aaPredicted RBP23.13■■□□□ 1.29
TULP3-208ENST00000545331 CCDC88AQ3V6T2 1871 aa23.12■■□□□ 1.29
TULP3-208ENST00000545331 ITGA6P23229 1130 aa23.12■■□□□ 1.29
TULP3-208ENST00000545331 SUPT20HQ8NEM7 779 aa23.12■■□□□ 1.29
TULP3-208ENST00000545331 SUCLG2Q96I99 432 aa23.12■■□□□ 1.29
TULP3-208ENST00000545331 VPS33BQ9H267 617 aa23.12■■□□□ 1.29
TULP3-208ENST00000545331 FAM161AQ3B820 660 aa23.11■■□□□ 1.29
TULP3-208ENST00000545331 MPNDQ8N594 471 aa23.11■■□□□ 1.29
TULP3-208ENST00000545331 RTFDC1Q9BY42 306 aaPredicted RBP23.11■■□□□ 1.29
TULP3-208ENST00000545331 COL4A1P02462 1669 aa23.1■■□□□ 1.29
TULP3-208ENST00000545331 ANKRD18BA2A2Z9 1011 aa23.1■■□□□ 1.29
TULP3-208ENST00000545331 MS4A1P11836 297 aa23.1■■□□□ 1.29
TULP3-208ENST00000545331 IGHMBP2P38935 993 aaKnown RBP23.1■■□□□ 1.29
TULP3-208ENST00000545331 IFIT5Q13325 482 aaKnown RBP23.1■■□□□ 1.29
TULP3-208ENST00000545331 RABL6Q3YEC7 729 aaPredicted RBP23.1■■□□□ 1.29
TULP3-208ENST00000545331 LMBR1LQ6UX01 489 aa23.1■■□□□ 1.29
TULP3-208ENST00000545331 FTSJ3Q8IY81 847 aaKnown RBP23.1■■□□□ 1.29
TULP3-208ENST00000545331 BSDC1Q9NW68 430 aaPredicted RBP23.1■■□□□ 1.29
TULP3-208ENST00000545331 UBTFL1P0CB47 393 aaPredicted RBP23.09■■□□□ 1.29
TULP3-208ENST00000545331 PRELPP51888 382 aa23.09■■□□□ 1.29
TULP3-208ENST00000545331 EPHA10Q5JZY3 1008 aa23.09■■□□□ 1.29
TULP3-208ENST00000545331 DPP8Q6V1X1 898 aaPredicted RBP23.09■■□□□ 1.29
TULP3-208ENST00000545331 DZIP1LQ8IYY4 767 aaKnown RBP23.09■■□□□ 1.29
TULP3-208ENST00000545331 KAZALD1Q96I82 304 aa23.09■■□□□ 1.29
TULP3-208ENST00000545331 GNAI3P08754 354 aa23.08■■□□□ 1.29
TULP3-208ENST00000545331 IARSP41252 1262 aaKnown RBP23.08■■□□□ 1.29
TULP3-208ENST00000545331 CCDC57Q2TAC2 916 aa23.08■■□□□ 1.29
TULP3-208ENST00000545331 CLUAP1Q96AJ1 413 aa23.08■■□□□ 1.29
TULP3-208ENST00000545331 PODXL2Q9NZ53 605 aa23.08■■□□□ 1.29
TULP3-208ENST00000545331 CHMP3Q9Y3E7 222 aa23.08■■□□□ 1.29
TULP3-208ENST00000545331 TIAM2Q8IVF5 1701 aa23.08■■□□□ 1.28
TULP3-208ENST00000545331 BICC1Q9H694 974 aaKnown RBP23.07■■□□□ 1.28
TULP3-208ENST00000545331 ZNF277Q9NRM2 450 aaPredicted RBP23.07■■□□□ 1.28
TULP3-208ENST00000545331 LTBP1Q14766 1721 aa23.06■■□□□ 1.28
TULP3-208ENST00000545331 MPHOSPH8Q99549 860 aa23.06■■□□□ 1.28
TULP3-208ENST00000545331 DUOX1Q9NRD9 1551 aa23.05■■□□□ 1.28
TULP3-208ENST00000545331 TMEM57Q8N5G2 664 aa23.05■■□□□ 1.28
TULP3-208ENST00000545331 NSFL1CQ9UNZ2 370 aaKnown RBP23.05■■□□□ 1.28
TULP3-208ENST00000545331 TNNQ9UQP3 1299 aa23.05■■□□□ 1.28
TULP3-208ENST00000545331 SLC51AQ86UW1 340 aa23.04■■□□□ 1.28
TULP3-208ENST00000545331 ANKRD44Q8N8A2 993 aa23.04■■□□□ 1.28
TULP3-208ENST00000545331 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.04■■□□□ 1.28
TULP3-208ENST00000545331 MEIS3Q99687 375 aa23.04■■□□□ 1.28
TULP3-208ENST00000545331 XDHP47989 1333 aa23.04■■□□□ 1.28
TULP3-208ENST00000545331 SPEF2Q9C093 1822 aa23.04■■□□□ 1.28
TULP3-208ENST00000545331 ZNF784Q8NCA9 323 aaPredicted RBP23.03■■□□□ 1.28
TULP3-208ENST00000545331 JDP2Q8WYK2 163 aa23.03■■□□□ 1.28
TULP3-208ENST00000545331 GPSM2P81274 684 aa23.02■■□□□ 1.28
TULP3-208ENST00000545331 KIAA2012Q0VF49 1180 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms