RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TBC1D8BQ0IIM8 1120 aa6.93□□□□□ -1.3
SNHG1-222ENST00000545308 SCG3Q8WXD2 468 aaKnown RBP6.93□□□□□ -1.3
SNHG1-222ENST00000545308 SLC6A14Q9UN76 642 aa6.93□□□□□ -1.3
SNHG1-222ENST00000545308 A0A0A0MRY4 1105 aa6.92□□□□□ -1.3
SNHG1-222ENST00000545308 RASA1P20936 1047 aa6.92□□□□□ -1.3
SNHG1-222ENST00000545308 SEC13P55735 322 aa6.92□□□□□ -1.3
SNHG1-222ENST00000545308 FOXD4L6Q3SYB3 417 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-222ENST00000545308 IER5Q5VY09 327 aa6.92□□□□□ -1.3
SNHG1-222ENST00000545308 B4GALNT3Q6L9W6 998 aa6.92□□□□□ -1.3
SNHG1-222ENST00000545308 LARP1Q6PKG0 1096 aaKnown RBP6.92□□□□□ -1.3
SNHG1-222ENST00000545308 FOXD4L3Q6VB84 417 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-222ENST00000545308 NGLY1Q96IV0 654 aa6.92□□□□□ -1.3
SNHG1-222ENST00000545308 GSX2Q9BZM3 304 aa6.92□□□□□ -1.3
SNHG1-222ENST00000545308 IGFLR1Q9H665 355 aa6.92□□□□□ -1.3
SNHG1-222ENST00000545308 JPH1Q9HDC5 661 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-222ENST00000545308 ELNP15502 786 aa6.91□□□□□ -1.3
SNHG1-222ENST00000545308 SELPP16109 830 aa6.91□□□□□ -1.3
SNHG1-222ENST00000545308 SSFA2P28290 1259 aa6.91□□□□□ -1.3
SNHG1-222ENST00000545308 ADGRE1Q14246 886 aa6.91□□□□□ -1.3
SNHG1-222ENST00000545308 CHMP7Q8WUX9 453 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-222ENST00000545308 NUDT8Q8WV74 236 aa6.91□□□□□ -1.3
SNHG1-222ENST00000545308 MBTPS1Q14703 1052 aa6.9□□□□□ -1.3
SNHG1-222ENST00000545308 RTN1Q16799 776 aa6.9□□□□□ -1.3
SNHG1-222ENST00000545308 ANKMY2Q8IV38 441 aa6.9□□□□□ -1.3
SNHG1-222ENST00000545308 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.3
SNHG1-222ENST00000545308 CLP1Q92989 425 aaKnown RBP6.9□□□□□ -1.3
SNHG1-222ENST00000545308 LENG1Q96BZ8 264 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-222ENST00000545308 DNAJB12Q9NXW2 375 aaKnown RBP6.9□□□□□ -1.3
SNHG1-222ENST00000545308 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-222ENST00000545308 TGFBR3LH3BV60 316 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 AFF1P51825 1210 aaKnown RBP6.89□□□□□ -1.31
SNHG1-222ENST00000545308 RAC1P63000 192 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 DPYDQ12882 1025 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 CCINQ13939 588 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 PRSS36Q5K4E3 855 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 PSAPL1Q6NUJ1 521 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 ILDR2Q71H61 639 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 CCER1Q8TC90 406 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-222ENST00000545308 PNMA5Q96PV4 448 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 PSMG3-AS1Q96PY0 264 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 DMGDHQ9UI17 866 aaKnown RBP6.89□□□□□ -1.31
SNHG1-222ENST00000545308 NAGPAQ9UK23 515 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 BCS1LQ9Y276 419 aa6.89□□□□□ -1.31
SNHG1-222ENST00000545308 SCO2A0A1W2PP80 73 aa6.88□□□□□ -1.31
SNHG1-222ENST00000545308 SCNN1AP37088 669 aa6.88□□□□□ -1.31
SNHG1-222ENST00000545308 NRG1Q02297 640 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-222ENST00000545308 TXNRD3Q86VQ6 643 aa6.88□□□□□ -1.31
SNHG1-222ENST00000545308 HINFPQ9BQA5 517 aa6.88□□□□□ -1.31
SNHG1-222ENST00000545308 RGS9O75916 674 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-222ENST00000545308 H2AFB1P0C5Y9 115 aa6.87□□□□□ -1.31
SNHG1-222ENST00000545308 H2AFB2P0C5Z0 115 aa6.87□□□□□ -1.31
SNHG1-222ENST00000545308 NFKB1P19838 968 aa6.87□□□□□ -1.31
SNHG1-222ENST00000545308 IGFBP4P22692 258 aa6.87□□□□□ -1.31
SNHG1-222ENST00000545308 SHISA2Q6UWI4 295 aa6.87□□□□□ -1.31
SNHG1-222ENST00000545308 AMOTL2Q9Y2J4 779 aa6.87□□□□□ -1.31
SNHG1-222ENST00000545308 EPB42P16452 691 aa6.86□□□□□ -1.31
SNHG1-222ENST00000545308 ATP2B4P23634 1241 aa6.86□□□□□ -1.31
SNHG1-222ENST00000545308 GRNP28799 593 aaKnown RBP6.86□□□□□ -1.31
SNHG1-222ENST00000545308 ARID4AP29374 1257 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-222ENST00000545308 PCSK7Q16549 785 aa6.86□□□□□ -1.31
SNHG1-222ENST00000545308 ARTNQ5T4W7 220 aa6.86□□□□□ -1.31
SNHG1-222ENST00000545308 DMRTC2Q8IXT2 367 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-222ENST00000545308 FMR1NBQ8N0W7 255 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-222ENST00000545308 LGR5O75473 907 aa6.85□□□□□ -1.31
SNHG1-222ENST00000545308 MAP3K6O95382 1288 aa6.85□□□□□ -1.31
SNHG1-222ENST00000545308 INPP5BP32019 993 aa6.85□□□□□ -1.31
SNHG1-222ENST00000545308 FAM35AQ86V20 835 aa6.85□□□□□ -1.31
SNHG1-222ENST00000545308 ZFP64Q9NPA5 681 aa6.85□□□□□ -1.31
SNHG1-222ENST00000545308 SOWAHDA6NJG2 315 aa6.84□□□□□ -1.31
SNHG1-222ENST00000545308 SERPINB4P48594 390 aa6.84□□□□□ -1.31
SNHG1-222ENST00000545308 IDH3AP50213 366 aa6.84□□□□□ -1.31
SNHG1-222ENST00000545308 SWI5Q1ZZU3 235 aa6.84□□□□□ -1.31
SNHG1-222ENST00000545308 NOM1Q5C9Z4 860 aaKnown RBP6.84□□□□□ -1.31
SNHG1-222ENST00000545308 MSL1Q68DK7 614 aa6.84□□□□□ -1.31
SNHG1-222ENST00000545308 KLK14Q9P0G3 267 aa6.84□□□□□ -1.31
SNHG1-222ENST00000545308 FRRS1LQ9P0K9 344 aa6.84□□□□□ -1.31
SNHG1-222ENST00000545308 E9PSI1 815 aa6.83□□□□□ -1.32
SNHG1-222ENST00000545308 GRIK5Q16478 980 aa6.83□□□□□ -1.32
SNHG1-222ENST00000545308 DNAJC14Q6Y2X3 702 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-222ENST00000545308 DTWD1Q8N5C7 304 aa6.83□□□□□ -1.32
SNHG1-222ENST00000545308 TP53INP1Q96A56 240 aa6.83□□□□□ -1.32
SNHG1-222ENST00000545308 LPIN3Q9BQK8 851 aa6.83□□□□□ -1.32
SNHG1-222ENST00000545308 SSBP4Q9BWG4 385 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-222ENST00000545308 C11orf16Q9NQ32 467 aa6.83□□□□□ -1.32
SNHG1-222ENST00000545308 ZFATQ9P243 1243 aa6.83□□□□□ -1.32
SNHG1-222ENST00000545308 USP21Q9UK80 565 aa6.83□□□□□ -1.32
SNHG1-222ENST00000545308 ZBTB42B2RXF5 422 aa6.82□□□□□ -1.32
SNHG1-222ENST00000545308 CPB1P15086 417 aa6.82□□□□□ -1.32
SNHG1-222ENST00000545308 ARSDP51689 593 aa6.82□□□□□ -1.32
SNHG1-222ENST00000545308 DGKZQ13574 1117 aa6.82□□□□□ -1.32
SNHG1-222ENST00000545308 OCLNQ16625 522 aa6.82□□□□□ -1.32
SNHG1-222ENST00000545308 PERM1Q5SV97 790 aa6.82□□□□□ -1.32
SNHG1-222ENST00000545308 DHX32Q7L7V1 743 aaKnown RBP6.82□□□□□ -1.32
SNHG1-222ENST00000545308 KRT25Q7Z3Z0 450 aa6.82□□□□□ -1.32
SNHG1-222ENST00000545308 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
SNHG1-222ENST00000545308 TRPM4Q8TD43 1214 aa6.82□□□□□ -1.32
SNHG1-222ENST00000545308 QTRT2Q9H974 415 aaKnown RBP6.82□□□□□ -1.32
SNHG1-222ENST00000545308 UNCXA6NJT0 531 aa6.81□□□□□ -1.32
SNHG1-222ENST00000545308 FOXO3O43524 673 aa6.81□□□□□ -1.32
SNHG1-222ENST00000545308 PRMT3O60678 531 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms