RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 SLC15A2Q16348 729 aa17.02■□□□□ 0.32
SCARB1-209ENST00000545305 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
SCARB1-209ENST00000545305 TAF7LQ5H9L4 462 aa17.02■□□□□ 0.32
SCARB1-209ENST00000545305 TPTE2Q6XPS3 522 aa17.02■□□□□ 0.32
SCARB1-209ENST00000545305 NUTM1Q86Y26 1132 aa17.02■□□□□ 0.32
SCARB1-209ENST00000545305 PNPLA7Q6ZV29 1317 aa17.01■□□□□ 0.31
SCARB1-209ENST00000545305 SMARCA5O60264 1052 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-209ENST00000545305 PDE4AP27815 886 aa17.01■□□□□ 0.31
SCARB1-209ENST00000545305 PTPN12Q05209 780 aaKnown RBP17.01■□□□□ 0.31
SCARB1-209ENST00000545305 IFIT5Q13325 482 aaKnown RBP17.01■□□□□ 0.31
SCARB1-209ENST00000545305 ERFEQ4G0M1 354 aa17.01■□□□□ 0.31
SCARB1-209ENST00000545305 CCDC152Q4G0S7 254 aa17.01■□□□□ 0.31
SCARB1-209ENST00000545305 COL23A1Q86Y22 540 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-209ENST00000545305 TTLL11Q8NHH1 800 aa17.01■□□□□ 0.31
SCARB1-209ENST00000545305 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
SCARB1-209ENST00000545305 BCL11AQ9H165 835 aa17.01■□□□□ 0.31
SCARB1-209ENST00000545305 SIL1Q9H173 461 aa17.01■□□□□ 0.31
SCARB1-209ENST00000545305 ANO8Q9HCE9 1232 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-209ENST00000545305 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
SCARB1-209ENST00000545305 NLGN1Q8N2Q7 840 aa17■□□□□ 0.31
SCARB1-209ENST00000545305 CNBD1Q8NA66 436 aa17■□□□□ 0.31
SCARB1-209ENST00000545305 KLHDC4Q8TBB5 520 aa17■□□□□ 0.31
SCARB1-209ENST00000545305 CCDC85AQ96PX6 553 aaPredicted RBP16.99■□□□□ 0.31
SCARB1-209ENST00000545305 GREM2Q9H772 168 aa16.99■□□□□ 0.31
SCARB1-209ENST00000545305 ABCC12Q96J65 1359 aa16.99■□□□□ 0.31
SCARB1-209ENST00000545305 ITGA6P23229 1130 aa16.98■□□□□ 0.31
SCARB1-209ENST00000545305 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
SCARB1-209ENST00000545305 CLASRPQ8N2M8 674 aaKnown RBP16.98■□□□□ 0.31
SCARB1-209ENST00000545305 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
SCARB1-209ENST00000545305 FBXO3Q9UK99 471 aa16.98■□□□□ 0.31
SCARB1-209ENST00000545305 RTL9Q8NET4 1388 aa16.98■□□□□ 0.31
SCARB1-209ENST00000545305 CIAO1O76071 339 aa16.97■□□□□ 0.31
SCARB1-209ENST00000545305 TM4SF1P30408 202 aa16.97■□□□□ 0.31
SCARB1-209ENST00000545305 ST5P78524 1137 aa16.97■□□□□ 0.31
SCARB1-209ENST00000545305 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
SCARB1-209ENST00000545305 EYA2O00167 538 aa16.96■□□□□ 0.31
SCARB1-209ENST00000545305 SERPINB2P05120 415 aa16.96■□□□□ 0.31
SCARB1-209ENST00000545305 IL15P40933 162 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-209ENST00000545305 ZNF594Q96JF6 807 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-209ENST00000545305 NLRP3Q96P20 1036 aa16.96■□□□□ 0.31
SCARB1-209ENST00000545305 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
SCARB1-209ENST00000545305 CDC5LQ99459 802 aaKnown RBP16.95■□□□□ 0.3
SCARB1-209ENST00000545305 LRP5O75197 1615 aa16.95■□□□□ 0.3
SCARB1-209ENST00000545305 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
SCARB1-209ENST00000545305 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
SCARB1-209ENST00000545305 SASH1O94885 1247 aa16.94■□□□□ 0.3
SCARB1-209ENST00000545305 IFIT2P09913 472 aaKnown RBP16.94■□□□□ 0.3
SCARB1-209ENST00000545305 DDR1Q08345 913 aa16.94■□□□□ 0.3
SCARB1-209ENST00000545305 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
SCARB1-209ENST00000545305 PLEKHM2Q8IWE5 1019 aa16.94■□□□□ 0.3
SCARB1-209ENST00000545305 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
SCARB1-209ENST00000545305 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
SCARB1-209ENST00000545305 CNNM1Q9NRU3 951 aa16.94■□□□□ 0.3
SCARB1-209ENST00000545305 MX1P20591 662 aa16.93■□□□□ 0.3
SCARB1-209ENST00000545305 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
SCARB1-209ENST00000545305 TFCP2Q12800 502 aa16.93■□□□□ 0.3
SCARB1-209ENST00000545305 LDHAL6AQ6ZMR3 332 aa16.93■□□□□ 0.3
SCARB1-209ENST00000545305 ATG9AQ7Z3C6 839 aa16.93■□□□□ 0.3
SCARB1-209ENST00000545305 AACSQ86V21 672 aa16.93■□□□□ 0.3
SCARB1-209ENST00000545305 OTUD7AQ8TE49 926 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-209ENST00000545305 PARP3Q9Y6F1 533 aa16.93■□□□□ 0.3
SCARB1-209ENST00000545305 AOX1Q06278 1338 aa16.93■□□□□ 0.3
SCARB1-209ENST00000545305 TNRC6CQ9HCJ0 1690 aaKnown RBP16.92■□□□□ 0.3
SCARB1-209ENST00000545305 LRRC24Q50LG9 513 aa16.92■□□□□ 0.3
SCARB1-209ENST00000545305 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
SCARB1-209ENST00000545305 CCDC24Q8N4L8 307 aa16.92■□□□□ 0.3
SCARB1-209ENST00000545305 MPHOSPH8Q99549 860 aa16.92■□□□□ 0.3
SCARB1-209ENST00000545305 CEP126Q9P2H0 1117 aa16.92■□□□□ 0.3
SCARB1-209ENST00000545305 MMP10P09238 476 aa16.91■□□□□ 0.3
SCARB1-209ENST00000545305 PDE1AP54750 535 aa16.91■□□□□ 0.3
SCARB1-209ENST00000545305 C3orf67Q6ZVT6 689 aa16.91■□□□□ 0.3
SCARB1-209ENST00000545305 ANKRD18AQ8IVF6 992 aa16.91■□□□□ 0.3
SCARB1-209ENST00000545305 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.31e-12■■■■■ 43
SCARB1-209ENST00000545305 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
SCARB1-209ENST00000545305 OSBPL3Q9H4L5 887 aa16.91■□□□□ 0.3
SCARB1-209ENST00000545305 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
SCARB1-209ENST00000545305 SEC31BQ9NQW1 1179 aa16.91■□□□□ 0.3
SCARB1-209ENST00000545305 SALL3Q9BXA9 1300 aa16.91■□□□□ 0.3
SCARB1-209ENST00000545305 NRXN2Q9P2S2 1712 aa16.9■□□□□ 0.3
SCARB1-209ENST00000545305 TNNI3KQ59H18 835 aa16.9■□□□□ 0.3
SCARB1-209ENST00000545305 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
SCARB1-209ENST00000545305 METTL24Q5JXM2 366 aa16.9■□□□□ 0.3
SCARB1-209ENST00000545305 TTC22Q5TAA0 569 aa16.9■□□□□ 0.3
SCARB1-209ENST00000545305 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
SCARB1-209ENST00000545305 STAP2Q9UGK3 403 aa16.9■□□□□ 0.3
SCARB1-209ENST00000545305 AKAP2Q9Y2D5 859 aa16.9■□□□□ 0.3
SCARB1-209ENST00000545305 FPGT-TNNI3KV9GXZ4 949 aa16.9■□□□□ 0.3
SCARB1-209ENST00000545305 SPEF2Q9C093 1822 aa16.9■□□□□ 0.3
SCARB1-209ENST00000545305 ZNF609O15014 1411 aa16.89■□□□□ 0.29
SCARB1-209ENST00000545305 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
SCARB1-209ENST00000545305 TTC41PQ6P2S7 1318 aa16.89■□□□□ 0.29
SCARB1-209ENST00000545305 MROH5Q6ZUA9 1318 aa16.89■□□□□ 0.29
SCARB1-209ENST00000545305 ERC2O15083 957 aa16.88■□□□□ 0.29
SCARB1-209ENST00000545305 SLC16A10Q8TF71 515 aa16.88■□□□□ 0.29
SCARB1-209ENST00000545305 EAF2Q96CJ1 260 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-209ENST00000545305 RIPOR2Q9Y4F9 1068 aa16.88■□□□□ 0.29
SCARB1-209ENST00000545305 CCDC8Q9H0W5 538 aaPredicted RBP16.87■□□□□ 0.29
SCARB1-209ENST00000545305 ECHDC1Q9NTX5 307 aa16.87■□□□□ 0.29
SCARB1-209ENST00000545305 GLRX3O76003 335 aaKnown RBP16.86■□□□□ 0.29
SCARB1-209ENST00000545305 TSHZ3Q63HK5 1081 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms