RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 MTRQ99707 1265 aa8.77□□□□□ -1.01
SPPL3-209ENST00000545209 STRN4Q9NRL3 753 aa8.77□□□□□ -1.01
SPPL3-209ENST00000545209 CHPF2Q9P2E5 772 aa8.77□□□□□ -1.01
SPPL3-209ENST00000545209 PCDHB3Q9Y5E6 796 aa8.77□□□□□ -1.01
SPPL3-209ENST00000545209 ROBO1Q9Y6N7 1651 aa8.77□□□□□ -1.01
SPPL3-209ENST00000545209 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
SPPL3-209ENST00000545209 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 HEG1Q9ULI3 1381 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 VIRMAQ69YN4 1812 aaKnown RBP8.76□□□□□ -1.01
SPPL3-209ENST00000545209 CYP27B1O15528 508 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 KCNQ3O43525 872 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 CABP4P57796 275 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 ZNF790Q6PG37 636 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 ERICH6Q7L0X2 663 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 NPM2Q86SE8 214 aaKnown RBP8.76□□□□□ -1.01
SPPL3-209ENST00000545209 MEIS3Q99687 375 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 UPF2Q9HAU5 1272 aaKnown RBP8.76□□□□□ -1.01
SPPL3-209ENST00000545209 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 GPCPD1Q9NPB8 672 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 HYPKQ9NX55 129 aa8.76□□□□□ -1.01
SPPL3-209ENST00000545209 ATP10DQ9P241 1426 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 DDX58O95786 925 aaKnown RBP8.75□□□□□ -1.01
SPPL3-209ENST00000545209 GCGRP47871 477 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 AMHR2Q16671 573 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 ANKRD45Q5TZF3 282 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 CEP85Q6P2H3 762 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 LARP1Q6PKG0 1096 aaKnown RBP8.75□□□□□ -1.01
SPPL3-209ENST00000545209 NFATC2IPQ8NCF5 419 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 DDRGK1Q96HY6 314 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 FMNL2Q96PY5 1086 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 TMUB1Q9BVT8 246 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 SRCIN1Q9C0H9 1055 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 HDAC5Q9UQL6 1122 aa8.75□□□□□ -1.01
SPPL3-209ENST00000545209 COL14A1Q05707 1796 aaKnown RBP8.75□□□□□ -1.01
SPPL3-209ENST00000545209 COL22A1Q8NFW1 1626 aaPredicted RBP8.75□□□□□ -1.01
SPPL3-209ENST00000545209 N4BP2Q86UW6 1770 aaPredicted RBP8.74□□□□□ -1.01
SPPL3-209ENST00000545209 ERVV-2B6SEH9 535 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 TRIM66O15016 1216 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 TOM1O60784 492 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 SNRPA1P09661 255 aaKnown RBP8.74□□□□□ -1.01
SPPL3-209ENST00000545209 UBTFL1P0CB47 393 aaPredicted RBP8.74□□□□□ -1.01
SPPL3-209ENST00000545209 CD46P15529 392 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 COPS2P61201 443 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 SIRT2Q8IXJ6 389 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 DNAAF4Q8WXU2 420 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 ZNF516Q92618 1163 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 IPO9Q96P70 1041 aaKnown RBP8.74□□□□□ -1.01
SPPL3-209ENST00000545209 DCTPP1Q9H773 170 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 PHAXQ9H814 394 aaKnown RBP8.74□□□□□ -1.01
SPPL3-209ENST00000545209 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
SPPL3-209ENST00000545209 DDX21Q9NR30 783 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPPL3-209ENST00000545209 SLC39A6Q13433 755 aa8.73□□□□□ -1.01
SPPL3-209ENST00000545209 REPIN1Q9BWE0 567 aaKnown RBP8.73□□□□□ -1.01
SPPL3-209ENST00000545209 FAM217BQ9NTX9 383 aaPredicted RBP8.73□□□□□ -1.01
SPPL3-209ENST00000545209 BTG4Q9NY30 223 aa8.73□□□□□ -1.01
SPPL3-209ENST00000545209 PI4KAP2A4QPH2 592 aa8.72□□□□□ -1.01
SPPL3-209ENST00000545209 EIF5BO60841 1220 aaKnown RBP8.72□□□□□ -1.01
SPPL3-209ENST00000545209 ALDH1L1O75891 902 aa8.72□□□□□ -1.01
SPPL3-209ENST00000545209 TTLL12Q14166 644 aaPredicted RBP8.72□□□□□ -1.01
SPPL3-209ENST00000545209 BLOC1S3Q6QNY0 202 aa8.72□□□□□ -1.01
SPPL3-209ENST00000545209 KSR2Q6VAB6 950 aa8.72□□□□□ -1.01
SPPL3-209ENST00000545209 PI4KAP1Q8N8J0 262 aa8.72□□□□□ -1.01
SPPL3-209ENST00000545209 ZNF496Q96IT1 587 aaPredicted RBP8.72□□□□□ -1.01
SPPL3-209ENST00000545209 PHLPP1O60346 1717 aa8.71□□□□□ -1.01
SPPL3-209ENST00000545209 ANXA1P04083 346 aa8.71□□□□□ -1.02
SPPL3-209ENST00000545209 BMP2KLQ5H9B9 411 aa8.71□□□□□ -1.02
SPPL3-209ENST00000545209 BEND3Q5T5X7 828 aa8.71□□□□□ -1.02
SPPL3-209ENST00000545209 DDX54Q8TDD1 881 aaKnown RBP8.71□□□□□ -1.02
SPPL3-209ENST00000545209 NOP58Q9Y2X3 529 aaKnown RBP8.71□□□□□ -1.02
SPPL3-209ENST00000545209 LRRFIP2Q9Y608 721 aaKnown RBP8.71□□□□□ -1.02
SPPL3-209ENST00000545209 ERBB4Q15303 1308 aa8.71□□□□□ -1.02
SPPL3-209ENST00000545209 ADCY9O60503 1353 aa8.71□□□□□ -1.02
SPPL3-209ENST00000545209 COL16A1Q07092 1604 aaPredicted RBP8.7□□□□□ -1.02
SPPL3-209ENST00000545209 A0A0G2JS52 829 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 ZPR1O75312 459 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 ATP8B2P98198 1209 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 NEXNQ0ZGT2 675 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 FUT2Q10981 343 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 PROSER3Q2NL68 480 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 LINS1Q8NG48 757 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 CDCA7Q9BWT1 371 aaPredicted RBP8.7□□□□□ -1.02
SPPL3-209ENST00000545209 USP44Q9H0E7 712 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 TMOD3Q9NYL9 352 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 USP35Q9P2H5 1018 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 MAP3K2Q9Y2U5 619 aa8.7□□□□□ -1.02
SPPL3-209ENST00000545209 PRAMEF22A3QJZ6 481 aa8.69□□□□□ -1.02
SPPL3-209ENST00000545209 NR1I2O75469 434 aa8.69□□□□□ -1.02
SPPL3-209ENST00000545209 SSTR3P32745 418 aaPredicted RBP8.69□□□□□ -1.02
SPPL3-209ENST00000545209 ATP6V1AP38606 617 aa8.69□□□□□ -1.02
SPPL3-209ENST00000545209 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
SPPL3-209ENST00000545209 PUS10Q3MIT2 529 aaKnown RBP8.69□□□□□ -1.02
SPPL3-209ENST00000545209 C9orf78Q9NZ63 289 aaPredicted RBP8.69□□□□□ -1.02
SPPL3-209ENST00000545209 IBTKQ9P2D0 1353 aaPredicted RBP8.69□□□□□ -1.02
SPPL3-209ENST00000545209 DISP2A7MBM2 1401 aa8.69□□□□□ -1.02
SPPL3-209ENST00000545209 C5P01031 1676 aa8.69□□□□□ -1.02
SPPL3-209ENST00000545209 PLCH1Q4KWH8 1693 aa8.69□□□□□ -1.02
SPPL3-209ENST00000545209 UBAP1LF5GYI3 381 aa8.68□□□□□ -1.02
SPPL3-209ENST00000545209 ADAMTS2O95450 1211 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms