RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 LRRC45Q96CN5 670 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 CABS1Q96KC9 395 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 BICDL2A1A5D9 508 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 KIF5AQ12840 1032 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 CTAGE1Q96RT6 745 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 AKR1B10O60218 316 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 ZSCAN22P10073 491 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-216ENST00000545170 NUF2Q9BZD4 464 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 LCA5Q86VQ0 697 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 N4BP2L2Q92802 583 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-216ENST00000545170 NACAP1Q9BZK3 213 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 XAB2Q9HCS7 855 aaKnown RBP9.81□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC184Q52MB2 194 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 TYRO3Q06418 890 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 IL1RAPL2Q9NP60 686 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 CTNNA3Q9UI47 895 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 RRP15Q9Y3B9 282 aaKnown RBP9.81□□□□□ -0.84
ATXN3-216ENST00000545170 SF3B2Q13435 895 aaKnown RBP9.81□□□□□ -0.84
ATXN3-216ENST00000545170 FYB2Q5VWT5 728 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 CXorf38Q8TB03 319 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 PHAXQ9H814 394 aaKnown RBP9.81□□□□□ -0.84
ATXN3-216ENST00000545170 SLC24A3Q9HC58 644 aa9.81□□□□□ -0.84
ATXN3-216ENST00000545170 GIGYF1O75420 1035 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-216ENST00000545170 ATP2B2Q01814 1243 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 SF3A3Q12874 501 aaKnown RBP eCLIP9.8□□□□□ -0.84
ATXN3-216ENST00000545170 UACAQ9BZF9 1416 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 RASIP1Q5U651 963 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC25Q86WR0 208 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 TSC1Q92574 1164 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 UTP14AQ9BVJ6 771 aaKnown RBP9.8□□□□□ -0.84
ATXN3-216ENST00000545170 CARD6Q9BX69 1037 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 SLC4A2P04920 1241 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 E2F4Q16254 413 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 EPSTI1Q96J88 318 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 RAB3IPQ96QF0 476 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-216ENST00000545170 RBSNQ9H1K0 784 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 DDX21Q9NR30 783 aaKnown RBP eCLIP9.8□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC196A0A1B0GTZ2 297 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 KRT86O43790 486 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 RAB11FIP3O75154 756 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 PNISRQ8TF01 805 aaKnown RBP9.8□□□□□ -0.84
ATXN3-216ENST00000545170 ZC4H2Q9NQZ6 224 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 CARMIL1Q5VZK9 1371 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 CHMP4BP1P59074 171 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 KRT83P78385 493 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC144CPQ8IYA2 1237 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 NKIRAS1Q9NYS0 192 aa9.8□□□□□ -0.84
ATXN3-216ENST00000545170 MTUS1Q9ULD2 1270 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 GOLGA6BA6NDN3 693 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC92Q53HC0 331 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-216ENST00000545170 TBC1D9Q6ZT07 1266 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 FKBP4Q02790 459 aaKnown RBP eCLIP9.79□□□□□ -0.84
ATXN3-216ENST00000545170 CFAP157Q5JU67 520 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 STAG1Q8WVM7 1258 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 ATP5DP30049 168 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 GSTA5Q7RTV2 222 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 JRKLQ9Y4A0 524 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 CCT2P78371 535 aaKnown RBP9.79□□□□□ -0.84
ATXN3-216ENST00000545170 VSIG1Q86XK7 387 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 ODF2LQ9ULJ1 636 aa9.79□□□□□ -0.84
ATXN3-216ENST00000545170 MINK1Q8N4C8 1332 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-216ENST00000545170 MTHFSP49914 203 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 RAB3GAP1Q15042 981 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 KANK3Q6NY19 840 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC65Q8IXS2 484 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 DNAI2Q9GZS0 605 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 RANBP1P43487 201 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC102BQ68D86 513 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC62Q6P9F0 684 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 IRAK4Q9NWZ3 460 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 IFNKQ9P0W0 207 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 TMEM110-MUSTN1A8MSY1 372 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 ZNF76P36508 570 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC122Q5T0U0 273 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 ZSCAN25Q6NSZ9 544 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 KLHDC4Q8TBB5 520 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 JPH2Q9BR39 696 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-216ENST00000545170 SRGAP3O43295 1099 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 POLR3DP05423 398 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-216ENST00000545170 TRIM47Q96LD4 638 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 ATP2A2P16615 1042 aaKnown RBP9.78□□□□□ -0.84
ATXN3-216ENST00000545170 ZKSCAN8Q15776 578 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-216ENST00000545170 ARHGAP24Q8N264 748 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 MTRF1LQ9UGC7 380 aaKnown RBP9.78□□□□□ -0.84
ATXN3-216ENST00000545170 ABCC8Q09428 1581 aa9.78□□□□□ -0.84
ATXN3-216ENST00000545170 PSMD6Q15008 389 aa9.77□□□□□ -0.84
ATXN3-216ENST00000545170 TTC16Q8NEE8 873 aa9.77□□□□□ -0.84
ATXN3-216ENST00000545170 DACT1Q9NYF0 836 aa9.77□□□□□ -0.84
ATXN3-216ENST00000545170 RRBP1Q9P2E9 1410 aaKnown RBP9.77□□□□□ -0.85
ATXN3-216ENST00000545170 LOC102724159A0A0B4J2E5 919 aa9.77□□□□□ -0.85
ATXN3-216ENST00000545170 WDHD1O75717 1129 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-216ENST00000545170 TNNC1P63316 161 aa9.77□□□□□ -0.85
ATXN3-216ENST00000545170 SSRP1Q08945 709 aaKnown RBP9.77□□□□□ -0.85
ATXN3-216ENST00000545170 PWP2Q15269 919 aaKnown RBP9.77□□□□□ -0.85
ATXN3-216ENST00000545170 PPP1R7Q15435 360 aa9.77□□□□□ -0.85
ATXN3-216ENST00000545170 FERMT2Q96AC1 680 aa9.77□□□□□ -0.85
ATXN3-216ENST00000545170 TRIM35Q9UPQ4 493 aa9.77□□□□□ -0.85
ATXN3-216ENST00000545170 SYKP43405 635 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms