RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 MBIPQ9NS73 344 aa18.36■□□□□ 0.53
DDX11-228ENST00000545115 HYPKQ9NX55 129 aa18.36■□□□□ 0.53
DDX11-228ENST00000545115 ZNRF3Q9ULT6 936 aa18.36■□□□□ 0.53
DDX11-228ENST00000545115 RASSF10A6NK89 507 aa18.35■□□□□ 0.53
DDX11-228ENST00000545115 ISCA1Q9BUE6 129 aa18.35■□□□□ 0.53
DDX11-228ENST00000545115 GPRC5DQ9NZD1 345 aa18.35■□□□□ 0.53
DDX11-228ENST00000545115 CXCL9Q07325 125 aa18.34■□□□□ 0.53
DDX11-228ENST00000545115 DEFB115Q30KQ5 88 aa18.34■□□□□ 0.53
DDX11-228ENST00000545115 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
DDX11-228ENST00000545115 DDX60Q8IY21 1712 aaKnown RBP18.33■□□□□ 0.52
DDX11-228ENST00000545115 ATP5J2-PTCD1G3V325 749 aa18.33■□□□□ 0.52
DDX11-228ENST00000545115 ZNF853P0CG23 659 aa18.33■□□□□ 0.52
DDX11-228ENST00000545115 CIAPIN1Q6FI81 312 aa18.33■□□□□ 0.52
DDX11-228ENST00000545115 AIDAQ96BJ3 306 aa18.33■□□□□ 0.52
DDX11-228ENST00000545115 FAM89AQ96GI7 184 aa18.33■□□□□ 0.52
DDX11-228ENST00000545115 ADARB2Q9NS39 739 aaKnown RBP18.33■□□□□ 0.52
DDX11-228ENST00000545115 ABT1Q9ULW3 272 aaKnown RBP18.33■□□□□ 0.52
DDX11-228ENST00000545115 LRRC37AA6NMS7 1700 aa18.32■□□□□ 0.52
DDX11-228ENST00000545115 CDHR2Q9BYE9 1310 aa18.32■□□□□ 0.52
DDX11-228ENST00000545115 APAF1O14727 1248 aa18.32■□□□□ 0.52
DDX11-228ENST00000545115 FOXN1O15353 648 aa18.32■□□□□ 0.52
DDX11-228ENST00000545115 CAPN15O75808 1086 aa18.32■□□□□ 0.52
DDX11-228ENST00000545115 CALD1Q05682 793 aaKnown RBP18.32■□□□□ 0.52
DDX11-228ENST00000545115 SF3B3Q15393 1217 aaKnown RBP18.32■□□□□ 0.52
DDX11-228ENST00000545115 IFT57Q9NWB7 429 aa18.32■□□□□ 0.52
DDX11-228ENST00000545115 DUOX1Q9NRD9 1551 aa18.32■□□□□ 0.52
DDX11-228ENST00000545115 GMPSP49915 693 aaPredicted RBP18.31■□□□□ 0.52
DDX11-228ENST00000545115 GNAI1P63096 354 aa18.31■□□□□ 0.52
DDX11-228ENST00000545115 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
DDX11-228ENST00000545115 TNIP1Q15025 636 aa18.31■□□□□ 0.52
DDX11-228ENST00000545115 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
DDX11-228ENST00000545115 CELF1Q92879 486 aaKnown RBP18.3■□□□□ 0.52
DDX11-228ENST00000545115 BCL2L13Q9BXK5 485 aa18.3■□□□□ 0.52
DDX11-228ENST00000545115 WBP1LQ9NX94 342 aa18.3■□□□□ 0.52
DDX11-228ENST00000545115 TAF1P21675 1872 aa18.3■□□□□ 0.52
DDX11-228ENST00000545115 WDR33Q9C0J8 1336 aaKnown RBP18.29■□□□□ 0.52
DDX11-228ENST00000545115 RAD17O75943 681 aa18.29■□□□□ 0.52
DDX11-228ENST00000545115 CTCFP49711 727 aaPredicted RBP18.29■□□□□ 0.52
DDX11-228ENST00000545115 FMR1Q06787 632 aaKnown RBP eCLIP18.29■□□□□ 0.52
DDX11-228ENST00000545115 RTL5Q5HYW3 569 aaPredicted RBP18.29■□□□□ 0.52
DDX11-228ENST00000545115 RIC3Q7Z5B4 369 aa18.29■□□□□ 0.52
DDX11-228ENST00000545115 PRDM10Q9NQV6 1147 aa18.29■□□□□ 0.52
DDX11-228ENST00000545115 YDJCA8MPS7 323 aa18.28■□□□□ 0.52
DDX11-228ENST00000545115 TRAF5O00463 557 aa18.28■□□□□ 0.52
DDX11-228ENST00000545115 IRS4O14654 1257 aaPredicted RBP18.28■□□□□ 0.52
DDX11-228ENST00000545115 PHAXQ9H814 394 aaKnown RBP18.28■□□□□ 0.52
DDX11-228ENST00000545115 NSFL1CQ9UNZ2 370 aaKnown RBP18.28■□□□□ 0.52
DDX11-228ENST00000545115 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
DDX11-228ENST00000545115 MAP2K1Q02750 393 aaPredicted RBP18.27■□□□□ 0.52
DDX11-228ENST00000545115 WASHC4Q2M389 1173 aa18.27■□□□□ 0.52
DDX11-228ENST00000545115 ZBTB38Q8NAP3 1195 aaPredicted RBP18.27■□□□□ 0.52
DDX11-228ENST00000545115 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
DDX11-228ENST00000545115 ECE1P42892 770 aa18.26■□□□□ 0.51
DDX11-228ENST00000545115 CST9Q5W186 159 aa18.26■□□□□ 0.51
DDX11-228ENST00000545115 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
DDX11-228ENST00000545115 ZC3H15Q8WU90 426 aaKnown RBP18.26■□□□□ 0.51
DDX11-228ENST00000545115 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
DDX11-228ENST00000545115 PGAP2Q9UHJ9 254 aa18.26■□□□□ 0.51
DDX11-228ENST00000545115 TRPM7Q96QT4 1865 aa18.25■□□□□ 0.51
DDX11-228ENST00000545115 THSD7BQ9C0I4 1608 aa18.25■□□□□ 0.51
DDX11-228ENST00000545115 CAPNS2Q96L46 248 aa18.25■□□□□ 0.51
DDX11-228ENST00000545115 EYA3Q99504 573 aa18.25■□□□□ 0.51
DDX11-228ENST00000545115 MYD88Q99836 296 aa18.25■□□□□ 0.51
DDX11-228ENST00000545115 CNOT7Q9UIV1 285 aaKnown RBP18.25■□□□□ 0.51
DDX11-228ENST00000545115 TLL2Q9Y6L7 1015 aa18.25■□□□□ 0.51
DDX11-228ENST00000545115 COL4A1P02462 1669 aa18.25■□□□□ 0.51
DDX11-228ENST00000545115 C6orf229H3BNL8 230 aa18.24■□□□□ 0.51
DDX11-228ENST00000545115 H7C1D1 291 aa18.24■□□□□ 0.51
DDX11-228ENST00000545115 RPS8P62241 208 aaKnown RBP18.24■□□□□ 0.51
DDX11-228ENST00000545115 GPSM2P81274 684 aa18.24■□□□□ 0.51
DDX11-228ENST00000545115 MICALL2Q8IY33 904 aa18.24■□□□□ 0.51
DDX11-228ENST00000545115 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
DDX11-228ENST00000545115 CCDC191Q8NCU4 936 aa18.24■□□□□ 0.51
DDX11-228ENST00000545115 TRPM4Q8TD43 1214 aa18.24■□□□□ 0.51
DDX11-228ENST00000545115 DBNDD1Q9H9R9 158 aa18.24■□□□□ 0.51
DDX11-228ENST00000545115 POLLQ9UGP5 575 aa18.24■□□□□ 0.51
DDX11-228ENST00000545115 PSMD14O00487 310 aa18.23■□□□□ 0.51
DDX11-228ENST00000545115 RIMBP2O15034 1052 aa18.23■□□□□ 0.51
DDX11-228ENST00000545115 CELF2O95319 508 aaKnown RBP18.23■□□□□ 0.51
DDX11-228ENST00000545115 DDX58O95786 925 aaKnown RBP18.23■□□□□ 0.51
DDX11-228ENST00000545115 PCCAP05165 728 aaPredicted RBP18.23■□□□□ 0.51
DDX11-228ENST00000545115 LBX1P52954 281 aa18.23■□□□□ 0.51
DDX11-228ENST00000545115 HIRAP54198 1017 aaPredicted RBP18.23■□□□□ 0.51
DDX11-228ENST00000545115 CCDC30Q5VVM6 783 aa18.23■□□□□ 0.51
DDX11-228ENST00000545115 DPF2Q92785 391 aa18.23■□□□□ 0.51
DDX11-228ENST00000545115 GLIS2Q9BZE0 524 aaPredicted RBP18.23■□□□□ 0.51
DDX11-228ENST00000545115 ZBTB12Q9Y330 459 aaPredicted RBP18.23■□□□□ 0.51
DDX11-228ENST00000545115 GRM1Q13255 1194 aa18.22■□□□□ 0.51
DDX11-228ENST00000545115 CCDC152Q4G0S7 254 aa18.22■□□□□ 0.51
DDX11-228ENST00000545115 CYP4F22Q6NT55 531 aa18.22■□□□□ 0.51
DDX11-228ENST00000545115 TBC1D16Q8TBP0 767 aa18.22■□□□□ 0.51
DDX11-228ENST00000545115 GPR101Q96P66 508 aaPredicted RBP18.22■□□□□ 0.51
DDX11-228ENST00000545115 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
DDX11-228ENST00000545115 SEC31BQ9NQW1 1179 aa18.22■□□□□ 0.51
DDX11-228ENST00000545115 CWC25Q9NXE8 425 aaPredicted RBP18.22■□□□□ 0.51
DDX11-228ENST00000545115 SHTN1A0MZ66 631 aa18.21■□□□□ 0.51
DDX11-228ENST00000545115 ECE2O60344 883 aa18.21■□□□□ 0.51
DDX11-228ENST00000545115 HSPA8P11142 646 aaKnown RBP18.21■□□□□ 0.51
DDX11-228ENST00000545115 RPS12P25398 132 aaKnown RBP18.21■□□□□ 0.51
DDX11-228ENST00000545115 CDC37L1Q7L3B6 337 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms