RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 GREM2Q9H772 168 aa13.95□□□□□ -0.18
TNC-213ENST00000544972 LAMB2P55268 1798 aa13.95□□□□□ -0.18
TNC-213ENST00000544972 EYA2O00167 538 aa13.94□□□□□ -0.18
TNC-213ENST00000544972 CDC45O75419 566 aa13.94□□□□□ -0.18
TNC-213ENST00000544972 CIAO1O76071 339 aa13.94□□□□□ -0.18
TNC-213ENST00000544972 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
TNC-213ENST00000544972 HCLS1P14317 486 aaPredicted RBP13.94□□□□□ -0.18
TNC-213ENST00000544972 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
TNC-213ENST00000544972 PUS3Q9BZE2 481 aaKnown RBP13.94□□□□□ -0.18
TNC-213ENST00000544972 TTC41PQ6P2S7 1318 aa13.94□□□□□ -0.18
TNC-213ENST00000544972 COL24A1Q17RW2 1714 aa13.94□□□□□ -0.18
TNC-213ENST00000544972 ZPR1O75312 459 aa13.94□□□□□ -0.18
TNC-213ENST00000544972 PHF14O94880 888 aa13.94□□□□□ -0.18
TNC-213ENST00000544972 ITGA6P23229 1130 aa13.94□□□□□ -0.18
TNC-213ENST00000544972 IL15P40933 162 aaPredicted RBP13.94□□□□□ -0.18
TNC-213ENST00000544972 IFIT5Q13325 482 aaKnown RBP13.94□□□□□ -0.18
TNC-213ENST00000544972 CCDC8Q9H0W5 538 aaPredicted RBP13.94□□□□□ -0.18
TNC-213ENST00000544972 TLR7Q9NYK1 1049 aaKnown RBP13.94□□□□□ -0.18
TNC-213ENST00000544972 TNS1Q9HBL0 1735 aaKnown RBP13.93□□□□□ -0.18
TNC-213ENST00000544972 ADRA2BP18089 450 aa13.93□□□□□ -0.18
TNC-213ENST00000544972 TNNI3KQ59H18 835 aa13.93□□□□□ -0.18
TNC-213ENST00000544972 ECHDC1Q9NTX5 307 aa13.93□□□□□ -0.18
TNC-213ENST00000544972 FBXO3Q9UK99 471 aa13.93□□□□□ -0.18
TNC-213ENST00000544972 FPGT-TNNI3KV9GXZ4 949 aa13.93□□□□□ -0.18
TNC-213ENST00000544972 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.92□□□□□ -0.18
TNC-213ENST00000544972 APBA3O96018 575 aa13.92□□□□□ -0.18
TNC-213ENST00000544972 RFC4P35249 363 aa13.92□□□□□ -0.18
TNC-213ENST00000544972 MFAP1P55081 439 aaKnown RBP13.92□□□□□ -0.18
TNC-213ENST00000544972 BICDL1Q6ZP65 573 aa13.92□□□□□ -0.18
TNC-213ENST00000544972 ANP32AP39687 249 aaKnown RBP13.92□□□□□ -0.18
TNC-213ENST00000544972 DBNLQ9UJU6 430 aaKnown RBP13.92□□□□□ -0.18
TNC-213ENST00000544972 ANKRD18BA2A2Z9 1011 aa13.91□□□□□ -0.18
TNC-213ENST00000544972 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
TNC-213ENST00000544972 ERFEQ4G0M1 354 aa13.91□□□□□ -0.18
TNC-213ENST00000544972 TBC1D32Q96NH3 1257 aa13.91□□□□□ -0.18
TNC-213ENST00000544972 SETDB2Q96T68 719 aa13.91□□□□□ -0.18
TNC-213ENST00000544972 GPR108Q9NPR9 543 aa13.91□□□□□ -0.18
TNC-213ENST00000544972 LRP5O75197 1615 aa13.91□□□□□ -0.18
TNC-213ENST00000544972 CASZ1Q86V15 1759 aa13.91□□□□□ -0.18
TNC-213ENST00000544972 ERC2O15083 957 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 SSFA2P28290 1259 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 RIPOR2Q9Y4F9 1068 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 AK9Q5TCS8 1911 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 MAP4K4O95819 1239 aaPredicted RBP13.9□□□□□ -0.18
TNC-213ENST00000544972 TAF7LQ5H9L4 462 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 SLC10A5Q5PT55 438 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 RTL9Q8NET4 1388 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 RILPL2Q969X0 211 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 GPATCH3Q96I76 525 aa13.9□□□□□ -0.18
TNC-213ENST00000544972 UPF2Q9HAU5 1272 aaKnown RBP13.9□□□□□ -0.18
TNC-213ENST00000544972 ZNF609O15014 1411 aa13.89□□□□□ -0.19
TNC-213ENST00000544972 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
TNC-213ENST00000544972 ABCC12Q96J65 1359 aa13.89□□□□□ -0.19
TNC-213ENST00000544972 HSP90B1P14625 803 aaKnown RBP13.89□□□□□ -0.19
TNC-213ENST00000544972 LDHAL6AQ6ZMR3 332 aa13.89□□□□□ -0.19
TNC-213ENST00000544972 C3orf67Q6ZVT6 689 aa13.89□□□□□ -0.19
TNC-213ENST00000544972 DBNDD2Q9BQY9 259 aa13.89□□□□□ -0.19
TNC-213ENST00000544972 SEC31BQ9NQW1 1179 aa13.89□□□□□ -0.19
TNC-213ENST00000544972 RGPD3A6NKT7 1758 aaPredicted RBP13.89□□□□□ -0.19
TNC-213ENST00000544972 RGPD4Q7Z3J3 1758 aa13.89□□□□□ -0.19
TNC-213ENST00000544972 TIMM10P62072 90 aa13.88□□□□□ -0.19
TNC-213ENST00000544972 NFIXQ14938 502 aa13.88□□□□□ -0.19
TNC-213ENST00000544972 ZNF827Q17R98 1081 aa13.88□□□□□ -0.19
TNC-213ENST00000544972 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
TNC-213ENST00000544972 CEP126Q9P2H0 1117 aa13.88□□□□□ -0.19
TNC-213ENST00000544972 COL4A1P02462 1669 aa13.88□□□□□ -0.19
TNC-213ENST00000544972 GYS1P13807 737 aa13.87□□□□□ -0.19
TNC-213ENST00000544972 CHMLP26374 656 aa13.87□□□□□ -0.19
TNC-213ENST00000544972 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
TNC-213ENST00000544972 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
TNC-213ENST00000544972 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
TNC-213ENST00000544972 NBPF5PQ86XG9 351 aaPredicted RBP13.87□□□□□ -0.19
TNC-213ENST00000544972 VGLL2Q8N8G2 317 aa13.87□□□□□ -0.19
TNC-213ENST00000544972 C22orf23Q9BZE7 217 aa13.87□□□□□ -0.19
TNC-213ENST00000544972 NYXQ9GZU5 481 aa13.87□□□□□ -0.19
TNC-213ENST00000544972 A0A1B0GUL7 405 aa13.87□□□□□ -0.19
TNC-213ENST00000544972 ATP5JP18859 108 aa13.87□□□□□ -0.19
TNC-213ENST00000544972 CNTROBQ8N137 903 aa13.87□□□□□ -0.19
TNC-213ENST00000544972 CASC1Q6TDU7 716 aa13.86□□□□□ -0.19
TNC-213ENST00000544972 TPTE2Q6XPS3 522 aa13.86□□□□□ -0.19
TNC-213ENST00000544972 IPO9Q96P70 1041 aaKnown RBP13.86□□□□□ -0.19
TNC-213ENST00000544972 BOLA2Q9H3K6 86 aa13.86□□□□□ -0.19
TNC-213ENST00000544972 CNNM1Q9NRU3 951 aa13.86□□□□□ -0.19
TNC-213ENST00000544972 CARMIL3Q8ND23 1372 aa13.86□□□□□ -0.19
TNC-213ENST00000544972 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
TNC-213ENST00000544972 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
TNC-213ENST00000544972 NEUROD6Q96NK8 337 aa13.85□□□□□ -0.19
TNC-213ENST00000544972 TAF1P21675 1872 aa13.85□□□□□ -0.19
TNC-213ENST00000544972 SPEF2Q9C093 1822 aa13.85□□□□□ -0.19
TNC-213ENST00000544972 METTL24Q5JXM2 366 aa13.85□□□□□ -0.19
TNC-213ENST00000544972 CCDC24Q8N4L8 307 aa13.85□□□□□ -0.19
TNC-213ENST00000544972 ESYT1Q9BSJ8 1104 aa13.85□□□□□ -0.19
TNC-213ENST00000544972 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
TNC-213ENST00000544972 AKAP2Q9Y2D5 859 aa13.85□□□□□ -0.19
TNC-213ENST00000544972 TM4SF1P30408 202 aa13.84□□□□□ -0.19
TNC-213ENST00000544972 EVI5LQ96CN4 794 aa13.84□□□□□ -0.19
TNC-213ENST00000544972 USP26Q9BXU7 913 aa13.84□□□□□ -0.19
TNC-213ENST00000544972 IL25Q9H293 177 aa13.84□□□□□ -0.19
TNC-213ENST00000544972 TNRC6CQ9HCJ0 1690 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms