RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 ZNF853P0CG23 659 aa18.09■□□□□ 0.49
SEMA4D-224ENST00000544513 DEFB115Q30KQ5 88 aa18.09■□□□□ 0.49
SEMA4D-224ENST00000544513 TMC4Q7Z404 712 aa18.09■□□□□ 0.49
SEMA4D-224ENST00000544513 MPNDQ8N594 471 aa18.09■□□□□ 0.49
SEMA4D-224ENST00000544513 WBP1LQ9NX94 342 aa18.09■□□□□ 0.49
SEMA4D-224ENST00000544513 TRIM28Q13263 835 aaKnown RBP18.08■□□□□ 0.48
SEMA4D-224ENST00000544513 DUSP27Q5VZP5 1158 aa18.08■□□□□ 0.48
SEMA4D-224ENST00000544513 PRDM10Q9NQV6 1147 aa18.08■□□□□ 0.48
SEMA4D-224ENST00000544513 HYPKQ9NX55 129 aa18.08■□□□□ 0.48
SEMA4D-224ENST00000544513 LRRC37AA6NMS7 1700 aa18.07■□□□□ 0.48
SEMA4D-224ENST00000544513 DDX60Q8IY21 1712 aaKnown RBP18.07■□□□□ 0.48
SEMA4D-224ENST00000544513 SF3B3Q15393 1217 aaKnown RBP18.07■□□□□ 0.48
SEMA4D-224ENST00000544513 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
SEMA4D-224ENST00000544513 ADARB2Q9NS39 739 aaKnown RBP18.07■□□□□ 0.48
SEMA4D-224ENST00000544513 MBIPQ9NS73 344 aa18.07■□□□□ 0.48
SEMA4D-224ENST00000544513 DUOX1Q9NRD9 1551 aa18.07■□□□□ 0.48
SEMA4D-224ENST00000544513 TAF1P21675 1872 aa18.07■□□□□ 0.48
SEMA4D-224ENST00000544513 CDHR2Q9BYE9 1310 aa18.06■□□□□ 0.48
SEMA4D-224ENST00000544513 CTCFP49711 727 aaPredicted RBP18.06■□□□□ 0.48
SEMA4D-224ENST00000544513 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
SEMA4D-224ENST00000544513 FMR1Q06787 632 aaKnown RBP eCLIP18.06■□□□□ 0.48
SEMA4D-224ENST00000544513 CST9Q5W186 159 aa18.06■□□□□ 0.48
SEMA4D-224ENST00000544513 PGAP2Q9UHJ9 254 aa18.06■□□□□ 0.48
SEMA4D-224ENST00000544513 WDR33Q9C0J8 1336 aaKnown RBP18.05■□□□□ 0.48
SEMA4D-224ENST00000544513 ATP5J2-PTCD1G3V325 749 aa18.05■□□□□ 0.48
SEMA4D-224ENST00000544513 CAPN15O75808 1086 aa18.05■□□□□ 0.48
SEMA4D-224ENST00000544513 CIAPIN1Q6FI81 312 aa18.05■□□□□ 0.48
SEMA4D-224ENST00000544513 FAM89AQ96GI7 184 aa18.05■□□□□ 0.48
SEMA4D-224ENST00000544513 YDJCA8MPS7 323 aa18.04■□□□□ 0.48
SEMA4D-224ENST00000544513 TRAF5O00463 557 aa18.04■□□□□ 0.48
SEMA4D-224ENST00000544513 TNIP1Q15025 636 aa18.04■□□□□ 0.48
SEMA4D-224ENST00000544513 ZNF428Q96B54 188 aa18.04■□□□□ 0.48
SEMA4D-224ENST00000544513 AIDAQ96BJ3 306 aa18.04■□□□□ 0.48
SEMA4D-224ENST00000544513 ABT1Q9ULW3 272 aaKnown RBP18.04■□□□□ 0.48
SEMA4D-224ENST00000544513 RAD17O75943 681 aa18.03■□□□□ 0.48
SEMA4D-224ENST00000544513 CELF1Q92879 486 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-224ENST00000544513 IFT57Q9NWB7 429 aa18.03■□□□□ 0.48
SEMA4D-224ENST00000544513 TRPM7Q96QT4 1865 aa18.03■□□□□ 0.48
SEMA4D-224ENST00000544513 COL4A1P02462 1669 aa18.03■□□□□ 0.48
SEMA4D-224ENST00000544513 THSD7BQ9C0I4 1608 aa18.02■□□□□ 0.48
SEMA4D-224ENST00000544513 APAF1O14727 1248 aa18.02■□□□□ 0.48
SEMA4D-224ENST00000544513 HIRAP54198 1017 aaPredicted RBP18.02■□□□□ 0.48
SEMA4D-224ENST00000544513 MAP2K1Q02750 393 aaPredicted RBP18.02■□□□□ 0.48
SEMA4D-224ENST00000544513 ZC3H15Q8WU90 426 aaKnown RBP18.02■□□□□ 0.48
SEMA4D-224ENST00000544513 CAPNS2Q96L46 248 aa18.01■□□□□ 0.47
SEMA4D-224ENST00000544513 POLLQ9UGP5 575 aa18.01■□□□□ 0.47
SEMA4D-224ENST00000544513 TLL2Q9Y6L7 1015 aa18.01■□□□□ 0.47
SEMA4D-224ENST00000544513 IRS4O14654 1257 aaPredicted RBP18■□□□□ 0.47
SEMA4D-224ENST00000544513 GNAI1P63096 354 aa18■□□□□ 0.47
SEMA4D-224ENST00000544513 CALD1Q05682 793 aaKnown RBP18■□□□□ 0.47
SEMA4D-224ENST00000544513 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
SEMA4D-224ENST00000544513 CNOT7Q9UIV1 285 aaKnown RBP18■□□□□ 0.47
SEMA4D-224ENST00000544513 HSPA8P11142 646 aaKnown RBP17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 ECE1P42892 770 aa17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 LBX1P52954 281 aa17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 GPSM2P81274 684 aa17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 WASHC4Q2M389 1173 aa17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 ZBTB38Q8NAP3 1195 aaPredicted RBP17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 TRPM4Q8TD43 1214 aa17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 DPF2Q92785 391 aa17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
SEMA4D-224ENST00000544513 SHTN1A0MZ66 631 aa17.98■□□□□ 0.47
SEMA4D-224ENST00000544513 RPS8P62241 208 aaKnown RBP17.98■□□□□ 0.47
SEMA4D-224ENST00000544513 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
SEMA4D-224ENST00000544513 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
SEMA4D-224ENST00000544513 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
SEMA4D-224ENST00000544513 SAPCD2Q86UD0 394 aa17.98■□□□□ 0.47
SEMA4D-224ENST00000544513 C8orf58Q8NAV2 365 aa17.98■□□□□ 0.47
SEMA4D-224ENST00000544513 PSMD14O00487 310 aa17.97■□□□□ 0.47
SEMA4D-224ENST00000544513 CYP4F22Q6NT55 531 aa17.97■□□□□ 0.47
SEMA4D-224ENST00000544513 CCDC191Q8NCU4 936 aa17.97■□□□□ 0.47
SEMA4D-224ENST00000544513 HHIPL1Q96JK4 782 aa17.97■□□□□ 0.47
SEMA4D-224ENST00000544513 GPR101Q96P66 508 aaPredicted RBP17.97■□□□□ 0.47
SEMA4D-224ENST00000544513 H7C1D1 291 aa17.96■□□□□ 0.47
SEMA4D-224ENST00000544513 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-224ENST00000544513 CELF2O95319 508 aaKnown RBP17.96■□□□□ 0.47
SEMA4D-224ENST00000544513 HSP90B1P14625 803 aaKnown RBP17.96■□□□□ 0.47
SEMA4D-224ENST00000544513 MICALL2Q8IY33 904 aa17.96■□□□□ 0.47
SEMA4D-224ENST00000544513 TBC1D16Q8TBP0 767 aa17.96■□□□□ 0.47
SEMA4D-224ENST00000544513 DBNDD1Q9H9R9 158 aa17.96■□□□□ 0.47
SEMA4D-224ENST00000544513 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
SEMA4D-224ENST00000544513 ZBTB12Q9Y330 459 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-224ENST00000544513 RTL9Q8NET4 1388 aa17.95■□□□□ 0.46
SEMA4D-224ENST00000544513 C6orf229H3BNL8 230 aa17.95■□□□□ 0.46
SEMA4D-224ENST00000544513 RIMBP2O15034 1052 aa17.95■□□□□ 0.46
SEMA4D-224ENST00000544513 PCCAP05165 728 aaPredicted RBP17.95■□□□□ 0.46
SEMA4D-224ENST00000544513 RPS12P25398 132 aaKnown RBP17.95■□□□□ 0.46
SEMA4D-224ENST00000544513 MAP2K2P36507 400 aa17.95■□□□□ 0.46
SEMA4D-224ENST00000544513 CDC37L1Q7L3B6 337 aa17.95■□□□□ 0.46
SEMA4D-224ENST00000544513 SEC31BQ9NQW1 1179 aa17.95■□□□□ 0.46
SEMA4D-224ENST00000544513 KCNQ5Q9NR82 932 aa17.95■□□□□ 0.46
SEMA4D-224ENST00000544513 ECE2O60344 883 aa17.94■□□□□ 0.46
SEMA4D-224ENST00000544513 EYA3Q99504 573 aa17.94■□□□□ 0.46
SEMA4D-224ENST00000544513 MYD88Q99836 296 aa17.94■□□□□ 0.46
SEMA4D-224ENST00000544513 METTL22Q9BUU2 404 aaPredicted RBP17.94■□□□□ 0.46
SEMA4D-224ENST00000544513 CHMP4AQ9BY43 222 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms