RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CCDC85AQ96PX6 553 aaPredicted RBP37.47■■■■□ 3.59
CCM2-219ENST00000544363 NYXQ9GZU5 481 aa37.47■■■■□ 3.59
CCM2-219ENST00000544363 MX1P20591 662 aa37.47■■■■□ 3.59
CCM2-219ENST00000544363 TFCP2L1Q9NZI6 479 aa37.47■■■■□ 3.59
CCM2-219ENST00000544363 DDX60Q8IY21 1712 aaKnown RBP37.46■■■■□ 3.59
CCM2-219ENST00000544363 TTC22Q5TAA0 569 aa37.46■■■■□ 3.59
CCM2-219ENST00000544363 ZNF594Q96JF6 807 aaPredicted RBP37.46■■■■□ 3.59
CCM2-219ENST00000544363 GREM2Q9H772 168 aa37.46■■■■□ 3.59
CCM2-219ENST00000544363 STAP2Q9UGK3 403 aa37.46■■■■□ 3.59
CCM2-219ENST00000544363 LAMB2P55268 1798 aa37.46■■■■□ 3.59
CCM2-219ENST00000544363 CAMKK2Q96RR4 588 aa37.45■■■■□ 3.59
CCM2-219ENST00000544363 ERFEQ4G0M1 354 aa37.44■■■■□ 3.58
CCM2-219ENST00000544363 EYA2O00167 538 aa37.43■■■■□ 3.58
CCM2-219ENST00000544363 CIAO1O76071 339 aa37.43■■■■□ 3.58
CCM2-219ENST00000544363 GYS1P13807 737 aa37.43■■■■□ 3.58
CCM2-219ENST00000544363 ITGA6P23229 1130 aa37.43■■■■□ 3.58
CCM2-219ENST00000544363 FBXO3Q9UK99 471 aa37.43■■■■□ 3.58
CCM2-219ENST00000544363 EN1Q05925 392 aaPredicted RBP37.43■■■■□ 3.58
CCM2-219ENST00000544363 ATG9AQ7Z3C6 839 aa37.43■■■■□ 3.58
CCM2-219ENST00000544363 NBPF5PQ86XG9 351 aaPredicted RBP37.43■■■■□ 3.58
CCM2-219ENST00000544363 ANKRD18BA2A2Z9 1011 aa37.42■■■■□ 3.58
CCM2-219ENST00000544363 GSPT1P15170 499 aaKnown RBP37.42■■■■□ 3.58
CCM2-219ENST00000544363 IL15P40933 162 aaPredicted RBP37.42■■■■□ 3.58
CCM2-219ENST00000544363 EZH2Q15910 746 aaKnown RBP37.42■■■■□ 3.58
CCM2-219ENST00000544363 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP37.42■■■■□ 3.58
CCM2-219ENST00000544363 NFIXQ14938 502 aa37.41■■■■□ 3.58
CCM2-219ENST00000544363 TAF7LQ5H9L4 462 aa37.41■■■■□ 3.58
CCM2-219ENST00000544363 SLC10A5Q5PT55 438 aa37.41■■■■□ 3.58
CCM2-219ENST00000544363 AOX1Q06278 1338 aa37.4■■■■□ 3.58
CCM2-219ENST00000544363 GTF2E1P29083 439 aaPredicted RBP37.4■■■■□ 3.58
CCM2-219ENST00000544363 SF3B2Q13435 895 aaKnown RBP37.4■■■■□ 3.58
CCM2-219ENST00000544363 TPTE2Q6XPS3 522 aa37.4■■■■□ 3.58
CCM2-219ENST00000544363 TFCP2Q12800 502 aa37.39■■■■□ 3.58
CCM2-219ENST00000544363 FLAD1Q8NFF5 587 aa37.39■■■■□ 3.58
CCM2-219ENST00000544363 CARMIL3Q8ND23 1372 aa37.39■■■■□ 3.58
CCM2-219ENST00000544363 IFIT2P09913 472 aaKnown RBP37.39■■■■□ 3.58
CCM2-219ENST00000544363 CCDC152Q4G0S7 254 aa37.39■■■■□ 3.58
CCM2-219ENST00000544363 LRRC24Q50LG9 513 aa37.39■■■■□ 3.58
CCM2-219ENST00000544363 AACSQ86V21 672 aa37.39■■■■□ 3.58
CCM2-219ENST00000544363 EAF2Q96CJ1 260 aaPredicted RBP37.38■■■■□ 3.57
CCM2-219ENST00000544363 PUS3Q9BZE2 481 aaKnown RBP37.37■■■■□ 3.57
CCM2-219ENST00000544363 RTL9Q8NET4 1388 aa37.37■■■■□ 3.57
CCM2-219ENST00000544363 TSHZ3Q63HK5 1081 aa37.36■■■■□ 3.57
CCM2-219ENST00000544363 TUBGCP6Q96RT7 1819 aa37.36■■■■□ 3.57
CCM2-219ENST00000544363 BAG6P46379 1132 aa37.36■■■■□ 3.57
CCM2-219ENST00000544363 RBM19Q9Y4C8 960 aaKnown RBP37.36■■■■□ 3.57
CCM2-219ENST00000544363 ABCC12Q96J65 1359 aa37.35■■■■□ 3.57
CCM2-219ENST00000544363 COL23A1Q86Y22 540 aaPredicted RBP37.35■■■■□ 3.57
CCM2-219ENST00000544363 TNNI3KQ59H18 835 aa37.34■■■■□ 3.57
CCM2-219ENST00000544363 FPGT-TNNI3KV9GXZ4 949 aa37.34■■■■□ 3.57
CCM2-219ENST00000544363 TTC41PQ6P2S7 1318 aa37.34■■■■□ 3.57
CCM2-219ENST00000544363 TM4SF1P30408 202 aa37.33■■■■□ 3.57
CCM2-219ENST00000544363 SF3B3Q15393 1217 aaKnown RBP37.33■■■■□ 3.57
CCM2-219ENST00000544363 GPR108Q9NPR9 543 aa37.32■■■■□ 3.57
CCM2-219ENST00000544363 LDHAL6AQ6ZMR3 332 aa37.32■■■■□ 3.56
CCM2-219ENST00000544363 GPATCH3Q96I76 525 aa37.32■■■■□ 3.56
CCM2-219ENST00000544363 CCDC8Q9H0W5 538 aaPredicted RBP37.32■■■■□ 3.56
CCM2-219ENST00000544363 PI4K2BQ8TCG2 481 aa37.31■■■■□ 3.56
CCM2-219ENST00000544363 CEP126Q9P2H0 1117 aa37.3■■■■□ 3.56
CCM2-219ENST00000544363 RIPOR2Q9Y4F9 1068 aa37.3■■■■□ 3.56
CCM2-219ENST00000544363 PNPLA7Q6ZV29 1317 aa37.3■■■■□ 3.56
CCM2-219ENST00000544363 SDSP20132 328 aa37.29■■■■□ 3.56
CCM2-219ENST00000544363 C3orf67Q6ZVT6 689 aa37.29■■■■□ 3.56
CCM2-219ENST00000544363 SEC31BQ9NQW1 1179 aa37.29■■■■□ 3.56
CCM2-219ENST00000544363 ECHDC1Q9NTX5 307 aa37.29■■■■□ 3.56
CCM2-219ENST00000544363 MSH5O43196 834 aa37.28■■■■□ 3.56
CCM2-219ENST00000544363 NLRP3Q96P20 1036 aa37.28■■■■□ 3.56
CCM2-219ENST00000544363 NPHP1O15259 732 aa37.28■■■■□ 3.56
CCM2-219ENST00000544363 CNBD1Q8NA66 436 aa37.28■■■■□ 3.56
CCM2-219ENST00000544363 CNNM1Q9NRU3 951 aa37.28■■■■□ 3.56
CCM2-219ENST00000544363 TLR7Q9NYK1 1049 aaKnown RBP37.28■■■■□ 3.56
CCM2-219ENST00000544363 LRP5O75197 1615 aa37.27■■■■□ 3.56
CCM2-219ENST00000544363 ERC2O15083 957 aa37.27■■■■□ 3.56
CCM2-219ENST00000544363 SLC15A2Q16348 729 aa37.27■■■■□ 3.56
CCM2-219ENST00000544363 ANO8Q9HCE9 1232 aaPredicted RBP37.27■■■■□ 3.56
CCM2-219ENST00000544363 DEFB132Q7Z7B7 95 aa37.26■■■■□ 3.56
CCM2-219ENST00000544363 NLGN1Q8N2Q7 840 aa37.26■■■■□ 3.56
CCM2-219ENST00000544363 STK32BQ9NY57 414 aa37.26■■■■□ 3.56
CCM2-219ENST00000544363 GLRX3O76003 335 aaKnown RBP37.25■■■■□ 3.55
CCM2-219ENST00000544363 SERPINB2P05120 415 aa37.25■■■■□ 3.55
CCM2-219ENST00000544363 CDC45O75419 566 aa37.25■■■■□ 3.55
CCM2-219ENST00000544363 CCDC24Q8N4L8 307 aa37.25■■■■□ 3.55
CCM2-219ENST00000544363 CASZ1Q86V15 1759 aa37.24■■■■□ 3.55
CCM2-219ENST00000544363 PRR5LQ6MZQ0 368 aa37.24■■■■□ 3.55
CCM2-219ENST00000544363 CDC5LQ99459 802 aaKnown RBP37.24■■■■□ 3.55
CCM2-219ENST00000544363 DBNLQ9UJU6 430 aaKnown RBP37.24■■■■□ 3.55
CCM2-219ENST00000544363 METTL24Q5JXM2 366 aa37.23■■■■□ 3.55
CCM2-219ENST00000544363 AKAP2Q9Y2D5 859 aa37.23■■■■□ 3.55
CCM2-219ENST00000544363 RIC1Q4ADV7 1423 aa37.23■■■■□ 3.55
CCM2-219ENST00000544363 POLRMTO00411 1230 aaKnown RBP37.22■■■■□ 3.55
CCM2-219ENST00000544363 SEC24BO95487 1268 aa37.22■■■■□ 3.55
CCM2-219ENST00000544363 IGHMBP2P38935 993 aaKnown RBP37.22■■■■□ 3.55
CCM2-219ENST00000544363 DDR1Q08345 913 aa37.22■■■■□ 3.55
CCM2-219ENST00000544363 CCDC125Q86Z20 511 aa37.22■■■■□ 3.55
CCM2-219ENST00000544363 MPHOSPH8Q99549 860 aa37.22■■■■□ 3.55
CCM2-219ENST00000544363 ZNF609O15014 1411 aa37.22■■■■□ 3.55
CCM2-219ENST00000544363 TBC1D9Q6ZT07 1266 aa37.21■■■■□ 3.55
CCM2-219ENST00000544363 DBNDD2Q9BQY9 259 aa37.2■■■■□ 3.55
CCM2-219ENST00000544363 MROH5Q6ZUA9 1318 aa37.19■■■■□ 3.54
CCM2-219ENST00000544363 TRIM6-TRIM34B2RNG4 842 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms