RNA–Protein interactions for RNA: ENST00000544276.1

LMO3-230, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-230ENST00000544276 CACNA1SQ13698 1873 aa13.65□□□□□ -0.22
LMO3-230ENST00000544276 ADAMTSL1Q8N6G6 1762 aa13.64□□□□□ -0.23
LMO3-230ENST00000544276 APAF1O14727 1248 aa13.64□□□□□ -0.23
LMO3-230ENST00000544276 KIAA2012Q0VF49 1180 aa13.64□□□□□ -0.23
LMO3-230ENST00000544276 AOC3Q16853 763 aa13.64□□□□□ -0.23
LMO3-230ENST00000544276 SLC51AQ86UW1 340 aa13.64□□□□□ -0.23
LMO3-230ENST00000544276 MKRN1Q9UHC7 482 aaKnown RBP13.64□□□□□ -0.23
LMO3-230ENST00000544276 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
LMO3-230ENST00000544276 RASSF10A6NK89 507 aa13.63□□□□□ -0.23
LMO3-230ENST00000544276 EPS15P42566 896 aa13.63□□□□□ -0.23
LMO3-230ENST00000544276 MAP1SQ66K74 1059 aaPredicted RBP13.63□□□□□ -0.23
LMO3-230ENST00000544276 HSP90B1P14625 803 aaKnown RBP13.62□□□□□ -0.23
LMO3-230ENST00000544276 CXCL9Q07325 125 aa13.62□□□□□ -0.23
LMO3-230ENST00000544276 FAM89AQ96GI7 184 aa13.62□□□□□ -0.23
LMO3-230ENST00000544276 ADARB2Q9NS39 739 aaKnown RBP13.62□□□□□ -0.23
LMO3-230ENST00000544276 GPRC5DQ9NZD1 345 aa13.62□□□□□ -0.23
LMO3-230ENST00000544276 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
LMO3-230ENST00000544276 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
LMO3-230ENST00000544276 TNIP1Q15025 636 aa13.61□□□□□ -0.23
LMO3-230ENST00000544276 ZBTB38Q8NAP3 1195 aaPredicted RBP13.61□□□□□ -0.23
LMO3-230ENST00000544276 IRS4O14654 1257 aaPredicted RBP13.6□□□□□ -0.23
LMO3-230ENST00000544276 VEGFBP49765 207 aa13.6□□□□□ -0.23
LMO3-230ENST00000544276 NCBP3Q53F19 620 aaKnown RBP13.6□□□□□ -0.23
LMO3-230ENST00000544276 CIAPIN1Q6FI81 312 aa13.6□□□□□ -0.23
LMO3-230ENST00000544276 RIC3Q7Z5B4 369 aa13.6□□□□□ -0.23
LMO3-230ENST00000544276 CCDC191Q8NCU4 936 aa13.6□□□□□ -0.23
LMO3-230ENST00000544276 PGAP2Q9UHJ9 254 aa13.6□□□□□ -0.23
LMO3-230ENST00000544276 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
LMO3-230ENST00000544276 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
LMO3-230ENST00000544276 CCDC30Q5VVM6 783 aa13.59□□□□□ -0.23
LMO3-230ENST00000544276 TNS4Q8IZW8 715 aa13.59□□□□□ -0.23
LMO3-230ENST00000544276 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
LMO3-230ENST00000544276 CELF1Q92879 486 aaKnown RBP13.59□□□□□ -0.23
LMO3-230ENST00000544276 ANKRD36CQ5JPF3 1778 aa13.58□□□□□ -0.23
LMO3-230ENST00000544276 GMPSP49915 693 aaPredicted RBP13.58□□□□□ -0.24
LMO3-230ENST00000544276 RPS8P62241 208 aaKnown RBP13.58□□□□□ -0.24
LMO3-230ENST00000544276 WASHC4Q2M389 1173 aa13.58□□□□□ -0.24
LMO3-230ENST00000544276 C8orf58Q8NAV2 365 aa13.58□□□□□ -0.24
LMO3-230ENST00000544276 PHAXQ9H814 394 aaKnown RBP13.58□□□□□ -0.24
LMO3-230ENST00000544276 LTBP1Q14766 1721 aa13.58□□□□□ -0.24
LMO3-230ENST00000544276 YDJCA8MPS7 323 aa13.57□□□□□ -0.24
LMO3-230ENST00000544276 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
LMO3-230ENST00000544276 PCCAP05165 728 aaPredicted RBP13.57□□□□□ -0.24
LMO3-230ENST00000544276 DPF2Q92785 391 aa13.57□□□□□ -0.24
LMO3-230ENST00000544276 PRDM10Q9NQV6 1147 aa13.57□□□□□ -0.24
LMO3-230ENST00000544276 WBP1LQ9NX94 342 aa13.57□□□□□ -0.24
LMO3-230ENST00000544276 PODXL2Q9NZ53 605 aa13.57□□□□□ -0.24
LMO3-230ENST00000544276 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
LMO3-230ENST00000544276 ELL2O00472 640 aaPredicted RBP13.56□□□□□ -0.24
LMO3-230ENST00000544276 FOXN1O15353 648 aa13.56□□□□□ -0.24
LMO3-230ENST00000544276 RAD17O75943 681 aa13.56□□□□□ -0.24
LMO3-230ENST00000544276 CTCFP49711 727 aaPredicted RBP13.56□□□□□ -0.24
LMO3-230ENST00000544276 CST9Q5W186 159 aa13.56□□□□□ -0.24
LMO3-230ENST00000544276 AIDAQ96BJ3 306 aa13.56□□□□□ -0.24
LMO3-230ENST00000544276 EYA3Q99504 573 aa13.56□□□□□ -0.24
LMO3-230ENST00000544276 METTL22Q9BUU2 404 aaPredicted RBP13.56□□□□□ -0.24
LMO3-230ENST00000544276 BCL2L13Q9BXK5 485 aa13.56□□□□□ -0.24
LMO3-230ENST00000544276 CWC25Q9NXE8 425 aaPredicted RBP13.56□□□□□ -0.24
LMO3-230ENST00000544276 POLLQ9UGP5 575 aa13.56□□□□□ -0.24
LMO3-230ENST00000544276 ABT1Q9ULW3 272 aaKnown RBP13.56□□□□□ -0.24
LMO3-230ENST00000544276 DUOX1Q9NRD9 1551 aa13.56□□□□□ -0.24
LMO3-230ENST00000544276 WDR33Q9C0J8 1336 aaKnown RBP13.56□□□□□ -0.24
LMO3-230ENST00000544276 H7C1D1 291 aa13.55□□□□□ -0.24
LMO3-230ENST00000544276 PDE8AO60658 829 aa13.55□□□□□ -0.24
LMO3-230ENST00000544276 RPS12P25398 132 aaKnown RBP13.55□□□□□ -0.24
LMO3-230ENST00000544276 ECE1P42892 770 aa13.55□□□□□ -0.24
LMO3-230ENST00000544276 GPSM2P81274 684 aa13.55□□□□□ -0.24
LMO3-230ENST00000544276 MAP2K1Q02750 393 aaPredicted RBP13.55□□□□□ -0.24
LMO3-230ENST00000544276 CCDC152Q4G0S7 254 aa13.55□□□□□ -0.24
LMO3-230ENST00000544276 MYD88Q99836 296 aa13.55□□□□□ -0.24
LMO3-230ENST00000544276 CNOT7Q9UIV1 285 aaKnown RBP13.55□□□□□ -0.24
LMO3-230ENST00000544276 TLL2Q9Y6L7 1015 aa13.55□□□□□ -0.24
LMO3-230ENST00000544276 IL16Q14005 1332 aa13.55□□□□□ -0.24
LMO3-230ENST00000544276 LRRC37AA6NMS7 1700 aa13.54□□□□□ -0.24
LMO3-230ENST00000544276 C6orf229H3BNL8 230 aa13.54□□□□□ -0.24
LMO3-230ENST00000544276 HIRAP54198 1017 aaPredicted RBP13.54□□□□□ -0.24
LMO3-230ENST00000544276 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
LMO3-230ENST00000544276 WWC1Q8IX03 1113 aa13.54□□□□□ -0.24
LMO3-230ENST00000544276 TBC1D16Q8TBP0 767 aa13.54□□□□□ -0.24
LMO3-230ENST00000544276 ZNF428Q96B54 188 aa13.54□□□□□ -0.24
LMO3-230ENST00000544276 HHIPL1Q96JK4 782 aa13.54□□□□□ -0.24
LMO3-230ENST00000544276 TRAF5O00463 557 aa13.53□□□□□ -0.24
LMO3-230ENST00000544276 KSR2Q6VAB6 950 aa13.53□□□□□ -0.24
LMO3-230ENST00000544276 CDC37L1Q7L3B6 337 aa13.53□□□□□ -0.24
LMO3-230ENST00000544276 TSPYL6Q8N831 410 aa13.53□□□□□ -0.24
LMO3-230ENST00000544276 LAMB2P55268 1798 aa13.53□□□□□ -0.24
LMO3-230ENST00000544276 PSMD14O00487 310 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.25
LMO3-230ENST00000544276 CCDC184Q52MB2 194 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 SAPCD2Q86UD0 394 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 MICALL2Q8IY33 904 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 TRPM4Q8TD43 1214 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 CAPNS2Q96L46 248 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 STK31Q9BXU1 1019 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 ZC3H12CQ9C0D7 883 aaKnown RBP13.52□□□□□ -0.25
LMO3-230ENST00000544276 DBNDD1Q9H9R9 158 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 SEC31BQ9NQW1 1179 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.25
LMO3-230ENST00000544276 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.25
LMO3-230ENST00000544276 PI4KAP2A4QPH2 592 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms