RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 STXBP4Q6ZWJ1 553 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 TCEANC2Q96MN5 208 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 SSX2IPQ9Y2D8 614 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 MRVI1Q9Y6F6 885 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 STAT6P42226 847 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 NUDT16Q96DE0 195 aaKnown RBP17.63■□□□□ 0.41
CHD4-210ENST00000544040 TMX3Q96JJ7 454 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 SPAG5Q96R06 1193 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 NAP1L3Q99457 506 aaPredicted RBP17.63■□□□□ 0.41
CHD4-210ENST00000544040 ZBTB3Q9H5J0 574 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 IGHDP01880 384 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 MARCKSP29966 332 aaPredicted RBP17.63■□□□□ 0.41
CHD4-210ENST00000544040 CYLC1P35663 651 aaPredicted RBP17.63■□□□□ 0.41
CHD4-210ENST00000544040 ZBTB16Q05516 673 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 RAB3IL1Q8TBN0 382 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 SYT1P21579 422 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 KARSQ15046 597 aaKnown RBP17.63■□□□□ 0.41
CHD4-210ENST00000544040 KIF5BP33176 963 aa17.62■□□□□ 0.41
CHD4-210ENST00000544040 FEZ1Q99689 392 aa17.62■□□□□ 0.41
CHD4-210ENST00000544040 SELENOOQ9BVL4 669 aa17.62■□□□□ 0.41
CHD4-210ENST00000544040 TTC12Q9H892 705 aaPredicted RBP17.62■□□□□ 0.41
CHD4-210ENST00000544040 RASAL2Q9UJF2 1139 aa17.62■□□□□ 0.41
CHD4-210ENST00000544040 NCOA7Q8NI08 942 aa17.62■□□□□ 0.41
CHD4-210ENST00000544040 SREK1Q8WXA9 508 aaKnown RBP17.62■□□□□ 0.41
CHD4-210ENST00000544040 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
CHD4-210ENST00000544040 ANKS4BQ8N8V4 417 aa17.62■□□□□ 0.41
CHD4-210ENST00000544040 ECHDC1Q9NTX5 307 aa17.62■□□□□ 0.41
CHD4-210ENST00000544040 OPA1O60313 960 aa17.62■□□□□ 0.41
CHD4-210ENST00000544040 HFM1A2PYH4 1435 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 ATP5J2-PTCD1G3V325 749 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 CTAGE9A4FU28 777 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 RHOXF2BP0C7M4 288 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 TTC22Q5TAA0 569 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 RHOXF2Q9BQY4 288 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 RMND1Q9NWS8 449 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 RPGRQ92834 1020 aaKnown RBP17.61■□□□□ 0.41
CHD4-210ENST00000544040 KLF18A0A0U1RQI7 1052 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 CCDC129Q6ZRS4 1044 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 IFT81Q8WYA0 676 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 IGF1RP08069 1367 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 TTF1Q15361 905 aaPredicted RBP17.61■□□□□ 0.41
CHD4-210ENST00000544040 BRF1Q92994 677 aa17.61■□□□□ 0.41
CHD4-210ENST00000544040 TTC21AQ8NDW8 1320 aa17.6■□□□□ 0.41
CHD4-210ENST00000544040 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
CHD4-210ENST00000544040 POLA1P09884 1462 aaPredicted RBP17.6■□□□□ 0.41
CHD4-210ENST00000544040 TTC31Q49AM3 519 aaPredicted RBP17.6■□□□□ 0.41
CHD4-210ENST00000544040 CFAP58Q5T655 872 aa17.6■□□□□ 0.41
CHD4-210ENST00000544040 GOLGA1Q92805 767 aa17.6■□□□□ 0.41
CHD4-210ENST00000544040 DPH6Q7L8W6 267 aa17.6■□□□□ 0.41
CHD4-210ENST00000544040 SMC6Q96SB8 1091 aa17.6■□□□□ 0.41
CHD4-210ENST00000544040 EEF2P13639 858 aaKnown RBP17.6■□□□□ 0.41
CHD4-210ENST00000544040 CCDC50Q8IVM0 306 aa17.6■□□□□ 0.41
CHD4-210ENST00000544040 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
CHD4-210ENST00000544040 CTAGE1Q96RT6 745 aa17.59■□□□□ 0.41
CHD4-210ENST00000544040 THEMISQ8N1K5 641 aaPredicted RBP17.59■□□□□ 0.41
CHD4-210ENST00000544040 PYM1Q9BRP8 204 aaKnown RBP17.59■□□□□ 0.41
CHD4-210ENST00000544040 LZTFL1Q9NQ48 299 aa17.59■□□□□ 0.41
CHD4-210ENST00000544040 FAM160A1Q05DH4 1040 aa17.59■□□□□ 0.41
CHD4-210ENST00000544040 PDE4BQ07343 736 aa17.59■□□□□ 0.41
CHD4-210ENST00000544040 TBC1D32Q96NH3 1257 aa17.59■□□□□ 0.41
CHD4-210ENST00000544040 ALG1Q9BT22 464 aa17.59■□□□□ 0.41
CHD4-210ENST00000544040 C9orf84Q5VXU9 1444 aa17.59■□□□□ 0.41
CHD4-210ENST00000544040 NME9Q86XW9 330 aa17.59■□□□□ 0.41
CHD4-210ENST00000544040 ZSCAN16Q9H4T2 348 aaPredicted RBP17.59■□□□□ 0.41
CHD4-210ENST00000544040 FGD5Q6ZNL6 1462 aa17.58■□□□□ 0.41
CHD4-210ENST00000544040 XRCC6P12956 609 aaKnown RBP eCLIP17.58■□□□□ 0.41
CHD4-210ENST00000544040 CA8P35219 290 aa17.58■□□□□ 0.41
CHD4-210ENST00000544040 C10orf67Q8IYJ2 551 aa17.58■□□□□ 0.41
CHD4-210ENST00000544040 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.41
CHD4-210ENST00000544040 C6orf229H3BNL8 230 aa17.58■□□□□ 0.41
CHD4-210ENST00000544040 FLIIQ13045 1269 aa17.58■□□□□ 0.41
CHD4-210ENST00000544040 KCNK9Q9NPC2 374 aa17.58■□□□□ 0.41
CHD4-210ENST00000544040 TACC1O75410 805 aa17.58■□□□□ 0.4
CHD4-210ENST00000544040 CCDC172P0C7W6 258 aa17.58■□□□□ 0.4
CHD4-210ENST00000544040 TPD52P55327 224 aaPredicted RBP17.58■□□□□ 0.4
CHD4-210ENST00000544040 UBE2Q2Q8WVN8 375 aa17.58■□□□□ 0.4
CHD4-210ENST00000544040 DACT1Q9NYF0 836 aa17.58■□□□□ 0.4
CHD4-210ENST00000544040 GUCA1BQ9UMX6 200 aa17.58■□□□□ 0.4
CHD4-210ENST00000544040 SLU7O95391 586 aaKnown RBP17.58■□□□□ 0.4
CHD4-210ENST00000544040 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.4
CHD4-210ENST00000544040 ZWINTO95229 277 aa17.58■□□□□ 0.4
CHD4-210ENST00000544040 HEATR3Q7Z4Q2 680 aa17.58■□□□□ 0.4
CHD4-210ENST00000544040 CCDC25Q86WR0 208 aa17.58■□□□□ 0.4
CHD4-210ENST00000544040 PAXIP1Q6ZW49 1069 aaPredicted RBP17.57■□□□□ 0.4
CHD4-210ENST00000544040 LRPPRCP42704 1394 aaKnown RBP17.57■□□□□ 0.4
CHD4-210ENST00000544040 RPGRIP1LQ68CZ1 1315 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 TLDC2A0PJX2 215 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 NDC80O14777 642 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 DHX58Q96C10 678 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 CEP83Q9Y592 693 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 DNM1Q05193 864 aaKnown RBP17.57■□□□□ 0.4
CHD4-210ENST00000544040 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 PLVAPQ9BX97 442 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 LMOD1P29536 600 aaPredicted RBP17.57■□□□□ 0.4
CHD4-210ENST00000544040 CPLX4Q7Z7G2 160 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 DDX12PQ92771 950 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 BMP2KLQ5H9B9 411 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 CCDC114Q96M63 670 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 LRRC27Q9C0I9 530 aa17.57■□□□□ 0.4
CHD4-210ENST00000544040 WTAPQ15007 396 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms