RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 E9PSI1 815 aa24.42■■□□□ 1.5
SPPL3-208ENST00000543854 IGKV5-2P06315 115 aa24.42■■□□□ 1.5
SPPL3-208ENST00000543854 TMC4Q7Z404 712 aa24.41■■□□□ 1.5
SPPL3-208ENST00000543854 NEURL1BA8MQ27 555 aa24.4■■□□□ 1.5
SPPL3-208ENST00000543854 VEGFAP15692 232 aaPredicted RBP24.4■■□□□ 1.5
SPPL3-208ENST00000543854 DIEXFQ68CQ4 756 aaKnown RBP24.4■■□□□ 1.5
SPPL3-208ENST00000543854 CDHR2Q9BYE9 1310 aa24.39■■□□□ 1.5
SPPL3-208ENST00000543854 CWF19L2Q2TBE0 894 aaKnown RBP24.39■■□□□ 1.49
SPPL3-208ENST00000543854 SP8Q8IXZ3 490 aa24.39■■□□□ 1.49
SPPL3-208ENST00000543854 DNAAF4Q8WXU2 420 aa24.39■■□□□ 1.49
SPPL3-208ENST00000543854 JDP2Q8WYK2 163 aa24.39■■□□□ 1.49
SPPL3-208ENST00000543854 PDE8AO60658 829 aa24.38■■□□□ 1.49
SPPL3-208ENST00000543854 DPP8Q6V1X1 898 aaPredicted RBP24.38■■□□□ 1.49
SPPL3-208ENST00000543854 RBM46Q8TBY0 533 aaKnown RBP24.38■■□□□ 1.49
SPPL3-208ENST00000543854 ZNF541Q9H0D2 1346 aa24.37■■□□□ 1.49
SPPL3-208ENST00000543854 MYH3P11055 1940 aa24.37■■□□□ 1.49
SPPL3-208ENST00000543854 COL4A5P29400 1685 aa24.37■■□□□ 1.49
SPPL3-208ENST00000543854 CCDC152Q4G0S7 254 aa24.37■■□□□ 1.49
SPPL3-208ENST00000543854 LARGE2Q8N3Y3 721 aa24.37■■□□□ 1.49
SPPL3-208ENST00000543854 SUPT20HQ8NEM7 779 aa24.37■■□□□ 1.49
SPPL3-208ENST00000543854 JARID2Q92833 1246 aaPredicted RBP24.37■■□□□ 1.49
SPPL3-208ENST00000543854 CELF1Q92879 486 aaKnown RBP24.37■■□□□ 1.49
SPPL3-208ENST00000543854 COL4A1P02462 1669 aa24.37■■□□□ 1.49
SPPL3-208ENST00000543854 DDNO94850 711 aaPredicted RBP24.36■■□□□ 1.49
SPPL3-208ENST00000543854 MPNDQ8N594 471 aa24.36■■□□□ 1.49
SPPL3-208ENST00000543854 PPIP5K2O43314 1243 aa24.35■■□□□ 1.49
SPPL3-208ENST00000543854 LINS1Q8NG48 757 aa24.35■■□□□ 1.49
SPPL3-208ENST00000543854 DUOX1Q9NRD9 1551 aa24.34■■□□□ 1.49
SPPL3-208ENST00000543854 FZD9O00144 591 aa24.34■■□□□ 1.49
SPPL3-208ENST00000543854 CTSWP56202 376 aa24.34■■□□□ 1.49
SPPL3-208ENST00000543854 SLFN5Q08AF3 891 aa24.34■■□□□ 1.49
SPPL3-208ENST00000543854 NIM1KQ8IY84 436 aa24.34■■□□□ 1.49
SPPL3-208ENST00000543854 RTFDC1Q9BY42 306 aaPredicted RBP24.34■■□□□ 1.49
SPPL3-208ENST00000543854 VPS33BQ9H267 617 aa24.34■■□□□ 1.49
SPPL3-208ENST00000543854 HSPA6P17066 643 aa24.33■■□□□ 1.49
SPPL3-208ENST00000543854 GCKRQ14397 625 aa24.33■■□□□ 1.49
SPPL3-208ENST00000543854 AOC3Q16853 763 aa24.33■■□□□ 1.49
SPPL3-208ENST00000543854 UBE3BQ7Z3V4 1068 aa24.33■■□□□ 1.49
SPPL3-208ENST00000543854 SCN4AP35499 1836 aa24.33■■□□□ 1.48
SPPL3-208ENST00000543854 EIF6P56537 245 aaKnown RBP24.32■■□□□ 1.48
SPPL3-208ENST00000543854 FSTL1Q12841 308 aa24.32■■□□□ 1.48
SPPL3-208ENST00000543854 SMC1BQ8NDV3 1235 aa24.32■■□□□ 1.48
SPPL3-208ENST00000543854 L3MBTL3Q96JM7 780 aaPredicted RBP24.32■■□□□ 1.48
SPPL3-208ENST00000543854 CCDC85AQ96PX6 553 aaPredicted RBP24.32■■□□□ 1.48
SPPL3-208ENST00000543854 SEC31BQ9NQW1 1179 aa24.32■■□□□ 1.48
SPPL3-208ENST00000543854 IQCA1LA6NCM1 817 aa24.31■■□□□ 1.48
SPPL3-208ENST00000543854 POTECB2RU33 542 aa24.31■■□□□ 1.48
SPPL3-208ENST00000543854 F6X3S4 739 aa24.31■■□□□ 1.48
SPPL3-208ENST00000543854 RPS8P62241 208 aaKnown RBP24.31■■□□□ 1.48
SPPL3-208ENST00000543854 LTBP1Q14766 1721 aa24.31■■□□□ 1.48
SPPL3-208ENST00000543854 MIER1Q8N108 512 aa24.31■■□□□ 1.48
SPPL3-208ENST00000543854 CEP350Q5VT06 3117 aa24.31■■□□□ 1.48
SPPL3-208ENST00000543854 GPC2Q8N158 579 aa24.3■■□□□ 1.48
SPPL3-208ENST00000543854 CDCA7LQ96GN5 454 aa24.3■■□□□ 1.48
SPPL3-208ENST00000543854 H7C1W4 665 aa24.29■■□□□ 1.48
SPPL3-208ENST00000543854 NSFL1CQ9UNZ2 370 aaKnown RBP24.29■■□□□ 1.48
SPPL3-208ENST00000543854 RTL9Q8NET4 1388 aa24.29■■□□□ 1.48
SPPL3-208ENST00000543854 KIAA2012Q0VF49 1180 aa24.28■■□□□ 1.48
SPPL3-208ENST00000543854 ANKRD18AQ8IVF6 992 aa24.28■■□□□ 1.48
SPPL3-208ENST00000543854 CDC5LQ99459 802 aaKnown RBP24.28■■□□□ 1.48
SPPL3-208ENST00000543854 SPEF2Q9C093 1822 aa24.28■■□□□ 1.48
SPPL3-208ENST00000543854 BEND3Q5T5X7 828 aa24.27■■□□□ 1.48
SPPL3-208ENST00000543854 TTLL11Q8NHH1 800 aa24.27■■□□□ 1.48
SPPL3-208ENST00000543854 GPSM2P81274 684 aa24.26■■□□□ 1.47
SPPL3-208ENST00000543854 PLA2G12BQ9BX93 195 aa24.26■■□□□ 1.47
SPPL3-208ENST00000543854 GREM2Q9H772 168 aa24.26■■□□□ 1.47
SPPL3-208ENST00000543854 GJA3Q9Y6H8 435 aa24.26■■□□□ 1.47
SPPL3-208ENST00000543854 CASP7P55210 303 aa24.25■■□□□ 1.47
SPPL3-208ENST00000543854 SLC4A10Q6U841 1118 aa24.25■■□□□ 1.47
SPPL3-208ENST00000543854 MRPL50Q8N5N7 158 aaKnown RBP24.25■■□□□ 1.47
SPPL3-208ENST00000543854 HACL1Q9UJ83 578 aa24.25■■□□□ 1.47
SPPL3-208ENST00000543854 ZNRF3Q9ULT6 936 aa24.25■■□□□ 1.47
SPPL3-208ENST00000543854 C6orf229H3BNL8 230 aa24.24■■□□□ 1.47
SPPL3-208ENST00000543854 TRMT2AQ8IZ69 625 aaKnown RBP24.24■■□□□ 1.47
SPPL3-208ENST00000543854 TAF1DQ9H5J8 278 aaPredicted RBP24.24■■□□□ 1.47
SPPL3-208ENST00000543854 ANKIB1Q9P2G1 1089 aa24.24■■□□□ 1.47
SPPL3-208ENST00000543854 PTPRCP08575 1304 aa24.24■■□□□ 1.47
SPPL3-208ENST00000543854 APLP1P51693 650 aa24.23■■□□□ 1.47
SPPL3-208ENST00000543854 WASHC4Q2M389 1173 aa24.23■■□□□ 1.47
SPPL3-208ENST00000543854 SSH1Q8WYL5 1049 aa24.23■■□□□ 1.47
SPPL3-208ENST00000543854 EYA3Q99504 573 aa24.23■■□□□ 1.47
SPPL3-208ENST00000543854 GRM8O00222 908 aa24.22■■□□□ 1.47
SPPL3-208ENST00000543854 CT47B1P0C2W7 299 aaPredicted RBP24.22■■□□□ 1.47
SPPL3-208ENST00000543854 LMOD1P29536 600 aaPredicted RBP24.22■■□□□ 1.47
SPPL3-208ENST00000543854 FAM161AQ3B820 660 aa24.22■■□□□ 1.47
SPPL3-208ENST00000543854 ALDH1L2Q3SY69 923 aa24.22■■□□□ 1.47
SPPL3-208ENST00000543854 TBC1D16Q8TBP0 767 aa24.22■■□□□ 1.47
SPPL3-208ENST00000543854 BCL2L13Q9BXK5 485 aa24.22■■□□□ 1.47
SPPL3-208ENST00000543854 SRCIN1Q9C0H9 1055 aa24.22■■□□□ 1.47
SPPL3-208ENST00000543854 PODXL2Q9NZ53 605 aa24.22■■□□□ 1.47
SPPL3-208ENST00000543854 POLLQ9UGP5 575 aa24.22■■□□□ 1.47
SPPL3-208ENST00000543854 ALDH1L1O75891 902 aa24.21■■□□□ 1.47
SPPL3-208ENST00000543854 UFL1O94874 794 aa24.21■■□□□ 1.47
SPPL3-208ENST00000543854 EPHX2P34913 555 aa24.21■■□□□ 1.47
SPPL3-208ENST00000543854 SMC4Q9NTJ3 1288 aa24.21■■□□□ 1.47
SPPL3-208ENST00000543854 GGA1Q9UJY5 639 aa24.21■■□□□ 1.47
SPPL3-208ENST00000543854 XDHP47989 1333 aa24.2■■□□□ 1.46
SPPL3-208ENST00000543854 LDHDQ86WU2 507 aa24.2■■□□□ 1.46
SPPL3-208ENST00000543854 C9orf78Q9NZ63 289 aaPredicted RBP24.2■■□□□ 1.46
SPPL3-208ENST00000543854 RIMBP2O15034 1052 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms