RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 ABCC4O15439 1325 aa22.65■■□□□ 1.22
TSFM-208ENST00000543727 BBOX1O75936 387 aa22.65■■□□□ 1.22
TSFM-208ENST00000543727 SLC4A10Q6U841 1118 aa22.65■■□□□ 1.22
TSFM-208ENST00000543727 UBE3BQ7Z3V4 1068 aa22.65■■□□□ 1.22
TSFM-208ENST00000543727 RTKN2Q8IZC4 609 aa22.65■■□□□ 1.22
TSFM-208ENST00000543727 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.21
TSFM-208ENST00000543727 GRAPQ13588 217 aa22.64■■□□□ 1.21
TSFM-208ENST00000543727 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.21
TSFM-208ENST00000543727 GRAPLQ8TC17 118 aaPredicted RBP22.64■■□□□ 1.21
TSFM-208ENST00000543727 TMX4Q9H1E5 349 aaPredicted RBP22.64■■□□□ 1.21
TSFM-208ENST00000543727 ZC3H4Q9UPT8 1303 aaKnown RBP22.63■■□□□ 1.21
TSFM-208ENST00000543727 GRM8O00222 908 aa22.63■■□□□ 1.21
TSFM-208ENST00000543727 PPEF1O14829 653 aaPredicted RBP22.63■■□□□ 1.21
TSFM-208ENST00000543727 CTSWP56202 376 aa22.63■■□□□ 1.21
TSFM-208ENST00000543727 SNED1Q8TER0 1413 aa22.63■■□□□ 1.21
TSFM-208ENST00000543727 CASP7P55210 303 aa22.62■■□□□ 1.21
TSFM-208ENST00000543727 TAOK3Q9H2K8 898 aa22.62■■□□□ 1.21
TSFM-208ENST00000543727 NOB1Q9ULX3 412 aaKnown RBP22.62■■□□□ 1.21
TSFM-208ENST00000543727 NFKBIEO00221 500 aa22.61■■□□□ 1.21
TSFM-208ENST00000543727 LMNB1P20700 586 aa22.61■■□□□ 1.21
TSFM-208ENST00000543727 CCT4P50991 539 aaKnown RBP22.61■■□□□ 1.21
TSFM-208ENST00000543727 C9orf78Q9NZ63 289 aaPredicted RBP22.61■■□□□ 1.21
TSFM-208ENST00000543727 ATP6V0A2Q9Y487 856 aa22.61■■□□□ 1.21
TSFM-208ENST00000543727 UTYO14607 1347 aa22.6■■□□□ 1.21
TSFM-208ENST00000543727 SPEF2Q9C093 1822 aa22.6■■□□□ 1.21
TSFM-208ENST00000543727 FKBP4Q02790 459 aaKnown RBP eCLIP22.59■■□□□ 1.21
TSFM-208ENST00000543727 SP8Q8IXZ3 490 aa22.59■■□□□ 1.21
TSFM-208ENST00000543727 PSMD1Q99460 953 aa22.59■■□□□ 1.21
TSFM-208ENST00000543727 LTBP1Q14766 1721 aa22.58■■□□□ 1.21
TSFM-208ENST00000543727 TTLL11Q8NHH1 800 aa22.58■■□□□ 1.21
TSFM-208ENST00000543727 CDC5LQ99459 802 aaKnown RBP22.58■■□□□ 1.21
TSFM-208ENST00000543727 ZNF219Q9P2Y4 722 aaPredicted RBP22.58■■□□□ 1.21
TSFM-208ENST00000543727 JARID2Q92833 1246 aaPredicted RBP22.57■■□□□ 1.2
TSFM-208ENST00000543727 CSF1RP07333 972 aa22.56■■□□□ 1.2
TSFM-208ENST00000543727 RPS8P62241 208 aaKnown RBP22.56■■□□□ 1.2
TSFM-208ENST00000543727 RASSF7Q02833 373 aa22.56■■□□□ 1.2
TSFM-208ENST00000543727 C9orf131Q5VYM1 1079 aa22.56■■□□□ 1.2
TSFM-208ENST00000543727 ATF7IPQ6VMQ6 1270 aa22.56■■□□□ 1.2
TSFM-208ENST00000543727 RNF181Q9P0P0 153 aa22.56■■□□□ 1.2
TSFM-208ENST00000543727 BCAR3O75815 825 aa22.55■■□□□ 1.2
TSFM-208ENST00000543727 VPS33BQ9H267 617 aa22.55■■□□□ 1.2
TSFM-208ENST00000543727 HDAC5Q9UQL6 1122 aa22.55■■□□□ 1.2
TSFM-208ENST00000543727 ZKSCAN2Q63HK3 967 aa22.54■■□□□ 1.2
TSFM-208ENST00000543727 ANKRD18AQ8IVF6 992 aa22.54■■□□□ 1.2
TSFM-208ENST00000543727 SUPT20HQ8NEM7 779 aa22.54■■□□□ 1.2
TSFM-208ENST00000543727 CELF1Q92879 486 aaKnown RBP22.54■■□□□ 1.2
TSFM-208ENST00000543727 COL4A1P02462 1669 aa22.54■■□□□ 1.2
TSFM-208ENST00000543727 TRIM27P14373 513 aa22.53■■□□□ 1.2
TSFM-208ENST00000543727 INTS3Q68E01 1043 aaKnown RBP22.53■■□□□ 1.2
TSFM-208ENST00000543727 DUOX1Q9NRD9 1551 aa22.52■■□□□ 1.2
TSFM-208ENST00000543727 FOXO4P98177 505 aa22.52■■□□□ 1.2
TSFM-208ENST00000543727 RTFDC1Q9BY42 306 aaPredicted RBP22.52■■□□□ 1.2
TSFM-208ENST00000543727 GREM2Q9H772 168 aa22.52■■□□□ 1.2
TSFM-208ENST00000543727 SEC31BQ9NQW1 1179 aa22.52■■□□□ 1.2
TSFM-208ENST00000543727 A0A1B0GUL6 1792 aa22.51■■□□□ 1.19
TSFM-208ENST00000543727 NBPF7P0C2Y1 421 aaPredicted RBP22.51■■□□□ 1.19
TSFM-208ENST00000543727 OLFM4Q6UX06 510 aa22.51■■□□□ 1.19
TSFM-208ENST00000543727 MPNDQ8N594 471 aa22.51■■□□□ 1.19
TSFM-208ENST00000543727 FRAT1Q92837 279 aaPredicted RBP22.51■■□□□ 1.19
TSFM-208ENST00000543727 USP44Q9H0E7 712 aa22.51■■□□□ 1.19
TSFM-208ENST00000543727 ITGA6P23229 1130 aa22.5■■□□□ 1.19
TSFM-208ENST00000543727 PRELPP51888 382 aa22.5■■□□□ 1.19
TSFM-208ENST00000543727 DPP8Q6V1X1 898 aaPredicted RBP22.5■■□□□ 1.19
TSFM-208ENST00000543727 BSDC1Q9NW68 430 aaPredicted RBP22.5■■□□□ 1.19
TSFM-208ENST00000543727 ANKRD18BA2A2Z9 1011 aa22.49■■□□□ 1.19
TSFM-208ENST00000543727 IGHMBP2P38935 993 aaKnown RBP22.49■■□□□ 1.19
TSFM-208ENST00000543727 IARSP41252 1262 aaKnown RBP22.49■■□□□ 1.19
TSFM-208ENST00000543727 IFIT5Q13325 482 aaKnown RBP22.49■■□□□ 1.19
TSFM-208ENST00000543727 FAM161AQ3B820 660 aa22.49■■□□□ 1.19
TSFM-208ENST00000543727 ZNF784Q8NCA9 323 aaPredicted RBP22.49■■□□□ 1.19
TSFM-208ENST00000543727 RABL6Q3YEC7 729 aaPredicted RBP22.48■■□□□ 1.19
TSFM-208ENST00000543727 CCDC85AQ96PX6 553 aaPredicted RBP22.48■■□□□ 1.19
TSFM-208ENST00000543727 PODXL2Q9NZ53 605 aa22.48■■□□□ 1.19
TSFM-208ENST00000543727 RCAN3Q9UKA8 241 aa22.48■■□□□ 1.19
TSFM-208ENST00000543727 MS4A1P11836 297 aa22.47■■□□□ 1.19
TSFM-208ENST00000543727 CCDC57Q2TAC2 916 aa22.47■■□□□ 1.19
TSFM-208ENST00000543727 LMBR1LQ6UX01 489 aa22.47■■□□□ 1.19
TSFM-208ENST00000543727 SUCLG2Q96I99 432 aa22.47■■□□□ 1.19
TSFM-208ENST00000543727 ZNF277Q9NRM2 450 aaPredicted RBP22.47■■□□□ 1.19
TSFM-208ENST00000543727 KDM2BQ8NHM5 1336 aa22.47■■□□□ 1.19
TSFM-208ENST00000543727 GNAI3P08754 354 aa22.46■■□□□ 1.19
TSFM-208ENST00000543727 UBTFL1P0CB47 393 aaPredicted RBP22.46■■□□□ 1.19
TSFM-208ENST00000543727 FTSJ3Q8IY81 847 aaKnown RBP22.46■■□□□ 1.19
TSFM-208ENST00000543727 JDP2Q8WYK2 163 aa22.46■■□□□ 1.19
TSFM-208ENST00000543727 KAZALD1Q96I82 304 aa22.46■■□□□ 1.19
TSFM-208ENST00000543727 MPHOSPH8Q99549 860 aa22.46■■□□□ 1.19
TSFM-208ENST00000543727 XDHP47989 1333 aa22.46■■□□□ 1.19
TSFM-208ENST00000543727 EPHA10Q5JZY3 1008 aa22.45■■□□□ 1.18
TSFM-208ENST00000543727 NSFL1CQ9UNZ2 370 aaKnown RBP22.45■■□□□ 1.18
TSFM-208ENST00000543727 CHMP3Q9Y3E7 222 aa22.45■■□□□ 1.18
TSFM-208ENST00000543727 WDR90Q96KV7 1748 aa22.45■■□□□ 1.18
TSFM-208ENST00000543727 DPY19L2Q6NUT2 758 aa22.44■■□□□ 1.18
TSFM-208ENST00000543727 DZIP1LQ8IYY4 767 aaKnown RBP22.44■■□□□ 1.18
TSFM-208ENST00000543727 EYA3Q99504 573 aa22.44■■□□□ 1.18
TSFM-208ENST00000543727 BICC1Q9H694 974 aaKnown RBP22.44■■□□□ 1.18
TSFM-208ENST00000543727 KIAA2012Q0VF49 1180 aa22.43■■□□□ 1.18
TSFM-208ENST00000543727 LARGE2Q8N3Y3 721 aa22.43■■□□□ 1.18
TSFM-208ENST00000543727 ANKIB1Q9P2G1 1089 aa22.43■■□□□ 1.18
TSFM-208ENST00000543727 SCN4AP35499 1836 aa22.43■■□□□ 1.18
TSFM-208ENST00000543727 GLTPD2A6NH11 291 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms