RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 NECTIN2Q92692 538 aa14.45□□□□□ -0.1
COPS7A-217ENST00000543537 RPGRQ92834 1020 aaKnown RBP14.45□□□□□ -0.1
COPS7A-217ENST00000543537 RBM17Q96I25 401 aaKnown RBP14.45□□□□□ -0.1
COPS7A-217ENST00000543537 NLRP3Q96P20 1036 aa14.45□□□□□ -0.1
COPS7A-217ENST00000543537 ISCA1Q9BUE6 129 aa14.45□□□□□ -0.1
COPS7A-217ENST00000543537 RWDD1Q9H446 243 aaPredicted RBP14.45□□□□□ -0.1
COPS7A-217ENST00000543537 AIMP1Q12904 312 aaKnown RBP14.44□□□□□ -0.1
COPS7A-217ENST00000543537 C3orf67Q6ZVT6 689 aa14.44□□□□□ -0.1
COPS7A-217ENST00000543537 MRPL50Q8N5N7 158 aaKnown RBP14.44□□□□□ -0.1
COPS7A-217ENST00000543537 L3MBTL3Q96JM7 780 aaPredicted RBP14.44□□□□□ -0.1
COPS7A-217ENST00000543537 SH3TC1Q8TE82 1336 aa14.43□□□□□ -0.1
COPS7A-217ENST00000543537 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
COPS7A-217ENST00000543537 OLFM4Q6UX06 510 aa14.43□□□□□ -0.1
COPS7A-217ENST00000543537 SMC1BQ8NDV3 1235 aa14.43□□□□□ -0.1
COPS7A-217ENST00000543537 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
COPS7A-217ENST00000543537 FZD9O00144 591 aa14.42□□□□□ -0.1
COPS7A-217ENST00000543537 IARSP41252 1262 aaKnown RBP14.42□□□□□ -0.1
COPS7A-217ENST00000543537 SYNE4Q8N205 404 aa14.42□□□□□ -0.1
COPS7A-217ENST00000543537 BBOX1O75936 387 aa14.41□□□□□ -0.1
COPS7A-217ENST00000543537 TRIM27P14373 513 aa14.41□□□□□ -0.1
COPS7A-217ENST00000543537 C8orf58Q8NAV2 365 aa14.41□□□□□ -0.1
COPS7A-217ENST00000543537 VPS33BQ9H267 617 aa14.41□□□□□ -0.1
COPS7A-217ENST00000543537 ZNF277Q9NRM2 450 aaPredicted RBP14.41□□□□□ -0.1
COPS7A-217ENST00000543537 TRMT112Q9UI30 125 aaKnown RBP14.41□□□□□ -0.1
COPS7A-217ENST00000543537 HDAC5Q9UQL6 1122 aa14.41□□□□□ -0.1
COPS7A-217ENST00000543537 ATP6V0A2Q9Y487 856 aa14.41□□□□□ -0.1
COPS7A-217ENST00000543537 PPEF1O14829 653 aaPredicted RBP14.4□□□□□ -0.1
COPS7A-217ENST00000543537 DNAJC5GQ8N7S2 189 aa14.4□□□□□ -0.1
COPS7A-217ENST00000543537 RTFDC1Q9BY42 306 aaPredicted RBP14.4□□□□□ -0.1
COPS7A-217ENST00000543537 COG6Q9Y2V7 657 aa14.4□□□□□ -0.1
COPS7A-217ENST00000543537 ABCC4O15439 1325 aa14.4□□□□□ -0.1
COPS7A-217ENST00000543537 IQCA1LA6NCM1 817 aa14.39□□□□□ -0.11
COPS7A-217ENST00000543537 DDNO94850 711 aaPredicted RBP14.39□□□□□ -0.11
COPS7A-217ENST00000543537 HCLS1P14317 486 aaPredicted RBP14.39□□□□□ -0.11
COPS7A-217ENST00000543537 SF3B3Q15393 1217 aaKnown RBP14.39□□□□□ -0.11
COPS7A-217ENST00000543537 C20orf194Q5TEA3 1177 aa14.39□□□□□ -0.11
COPS7A-217ENST00000543537 TMC4Q7Z404 712 aa14.39□□□□□ -0.11
COPS7A-217ENST00000543537 SCN4AP35499 1836 aa14.38□□□□□ -0.11
COPS7A-217ENST00000543537 LAMB2P55268 1798 aa14.38□□□□□ -0.11
COPS7A-217ENST00000543537 CCT4P50991 539 aaKnown RBP14.38□□□□□ -0.11
COPS7A-217ENST00000543537 SP8Q8IXZ3 490 aa14.38□□□□□ -0.11
COPS7A-217ENST00000543537 TSPYL6Q8N831 410 aa14.38□□□□□ -0.11
COPS7A-217ENST00000543537 PANK1Q8TE04 598 aa14.38□□□□□ -0.11
COPS7A-217ENST00000543537 PHAXQ9H814 394 aaKnown RBP14.38□□□□□ -0.11
COPS7A-217ENST00000543537 ELL2O00472 640 aaPredicted RBP14.37□□□□□ -0.11
COPS7A-217ENST00000543537 HDAC1Q13547 482 aaPredicted RBP14.37□□□□□ -0.11
COPS7A-217ENST00000543537 GRAPQ13588 217 aa14.37□□□□□ -0.11
COPS7A-217ENST00000543537 INTS3Q68E01 1043 aaKnown RBP14.37□□□□□ -0.11
COPS7A-217ENST00000543537 DDX46Q7L014 1031 aaKnown RBP14.37□□□□□ -0.11
COPS7A-217ENST00000543537 ITPRIPQ8IWB1 547 aa14.37□□□□□ -0.11
COPS7A-217ENST00000543537 GPC2Q8N158 579 aa14.37□□□□□ -0.11
COPS7A-217ENST00000543537 CCDC191Q8NCU4 936 aa14.37□□□□□ -0.11
COPS7A-217ENST00000543537 GRAPLQ8TC17 118 aaPredicted RBP14.37□□□□□ -0.11
COPS7A-217ENST00000543537 JDP2Q8WYK2 163 aa14.37□□□□□ -0.11
COPS7A-217ENST00000543537 BCL2L13Q9BXK5 485 aa14.37□□□□□ -0.11
COPS7A-217ENST00000543537 DDX60Q8IY21 1712 aaKnown RBP14.37□□□□□ -0.11
COPS7A-217ENST00000543537 ZNF541Q9H0D2 1346 aa14.37□□□□□ -0.11
COPS7A-217ENST00000543537 COL4A5P29400 1685 aa14.36□□□□□ -0.11
COPS7A-217ENST00000543537 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
COPS7A-217ENST00000543537 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
COPS7A-217ENST00000543537 RIC3Q7Z5B4 369 aa14.36□□□□□ -0.11
COPS7A-217ENST00000543537 ZBTB38Q8NAP3 1195 aaPredicted RBP14.36□□□□□ -0.11
COPS7A-217ENST00000543537 FAM89AQ96GI7 184 aa14.36□□□□□ -0.11
COPS7A-217ENST00000543537 METTL22Q9BUU2 404 aaPredicted RBP14.36□□□□□ -0.11
COPS7A-217ENST00000543537 TAF1DQ9H5J8 278 aaPredicted RBP14.36□□□□□ -0.11
COPS7A-217ENST00000543537 ATP5J2-PTCD1G3V325 749 aa14.35□□□□□ -0.11
COPS7A-217ENST00000543537 DDX58O95786 925 aaKnown RBP14.35□□□□□ -0.11
COPS7A-217ENST00000543537 SUPT20HQ8NEM7 779 aa14.35□□□□□ -0.11
COPS7A-217ENST00000543537 TMX4Q9H1E5 349 aaPredicted RBP14.35□□□□□ -0.11
COPS7A-217ENST00000543537 ZBTB40Q9NUA8 1239 aa14.35□□□□□ -0.11
COPS7A-217ENST00000543537 LRRC37AA6NMS7 1700 aa14.35□□□□□ -0.11
COPS7A-217ENST00000543537 EIF5BO60841 1220 aaKnown RBP14.34□□□□□ -0.11
COPS7A-217ENST00000543537 PCCAP05165 728 aaPredicted RBP14.34□□□□□ -0.11
COPS7A-217ENST00000543537 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
COPS7A-217ENST00000543537 SLC51AQ86UW1 340 aa14.34□□□□□ -0.11
COPS7A-217ENST00000543537 LDHDQ86WU2 507 aa14.34□□□□□ -0.11
COPS7A-217ENST00000543537 LARGE2Q8N3Y3 721 aa14.34□□□□□ -0.11
COPS7A-217ENST00000543537 ADAMTSL1Q8N6G6 1762 aa14.33□□□□□ -0.12
COPS7A-217ENST00000543537 IRS4O14654 1257 aaPredicted RBP14.33□□□□□ -0.12
COPS7A-217ENST00000543537 EIF6P56537 245 aaKnown RBP14.33□□□□□ -0.12
COPS7A-217ENST00000543537 KIAA2012Q0VF49 1180 aa14.33□□□□□ -0.12
COPS7A-217ENST00000543537 KSR2Q6VAB6 950 aa14.33□□□□□ -0.12
COPS7A-217ENST00000543537 JMYQ8N9B5 988 aa14.33□□□□□ -0.12
COPS7A-217ENST00000543537 KLRG1Q96E93 195 aa14.33□□□□□ -0.12
COPS7A-217ENST00000543537 HACL1Q9UJ83 578 aa14.33□□□□□ -0.12
COPS7A-217ENST00000543537 ZBTB7BO15156 539 aaPredicted RBP14.32□□□□□ -0.12
COPS7A-217ENST00000543537 DPP8Q6V1X1 898 aaPredicted RBP14.32□□□□□ -0.12
COPS7A-217ENST00000543537 PNMA8AQ86V59 439 aaPredicted RBP14.32□□□□□ -0.12
COPS7A-217ENST00000543537 RPAP2Q8IXW5 612 aaPredicted RBP14.32□□□□□ -0.12
COPS7A-217ENST00000543537 MPNDQ8N594 471 aa14.32□□□□□ -0.12
COPS7A-217ENST00000543537 TMEM57Q8N5G2 664 aa14.32□□□□□ -0.12
COPS7A-217ENST00000543537 GCC1Q96CN9 775 aa14.32□□□□□ -0.12
COPS7A-217ENST00000543537 CWC25Q9NXE8 425 aaPredicted RBP14.32□□□□□ -0.12
COPS7A-217ENST00000543537 DUOX1Q9NRD9 1551 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 PI4KAP2A4QPH2 592 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 PPIP5K2O43314 1243 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 GNAI3P08754 354 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 POTEIP0CG38 1075 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 POTEJP0CG39 1038 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 RLBP1P12271 317 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms