RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 CNBD1Q8NA66 436 aa18.52■□□□□ 0.56
TMEM258-207ENST00000543510 SURF6O75683 361 aaKnown RBP18.51■□□□□ 0.55
TMEM258-207ENST00000543510 OS9Q13438 667 aaPredicted RBP18.51■□□□□ 0.55
TMEM258-207ENST00000543510 KLHDC4Q8TBB5 520 aa18.51■□□□□ 0.55
TMEM258-207ENST00000543510 SSH3Q8TE77 659 aa18.51■□□□□ 0.55
TMEM258-207ENST00000543510 PA2G4Q9UQ80 394 aaKnown RBP18.51■□□□□ 0.55
TMEM258-207ENST00000543510 TM4SF1P30408 202 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 CTSWP56202 376 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 DDR1Q08345 913 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 SIL1Q9H173 461 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 ABCC12Q96J65 1359 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 MMP10P09238 476 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 HSP90B1P14625 803 aaKnown RBP18.5■□□□□ 0.55
TMEM258-207ENST00000543510 MTX1Q13505 466 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 POLA2Q14181 598 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 R3HDM1Q15032 1099 aaKnown RBP18.5■□□□□ 0.55
TMEM258-207ENST00000543510 RABL6Q3YEC7 729 aaPredicted RBP18.5■□□□□ 0.55
TMEM258-207ENST00000543510 TAF7LQ5H9L4 462 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 PLA2G12BQ9BX93 195 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 PARP3Q9Y6F1 533 aa18.5■□□□□ 0.55
TMEM258-207ENST00000543510 ST5P78524 1137 aa18.49■□□□□ 0.55
TMEM258-207ENST00000543510 CCDC57Q2TAC2 916 aa18.49■□□□□ 0.55
TMEM258-207ENST00000543510 POLRMTO00411 1230 aaKnown RBP18.48■□□□□ 0.55
TMEM258-207ENST00000543510 TTLL11Q8NHH1 800 aa18.48■□□□□ 0.55
TMEM258-207ENST00000543510 GREM2Q9H772 168 aa18.48■□□□□ 0.55
TMEM258-207ENST00000543510 SPEF2Q9C093 1822 aa18.47■□□□□ 0.55
TMEM258-207ENST00000543510 PSDA5PKW4 1024 aaPredicted RBP18.47■□□□□ 0.55
TMEM258-207ENST00000543510 ANP32AP39687 249 aaKnown RBP18.47■□□□□ 0.55
TMEM258-207ENST00000543510 IFIT5Q13325 482 aaKnown RBP18.47■□□□□ 0.55
TMEM258-207ENST00000543510 PRR5LQ6MZQ0 368 aa18.47■□□□□ 0.55
TMEM258-207ENST00000543510 ZNF594Q96JF6 807 aaPredicted RBP18.47■□□□□ 0.55
TMEM258-207ENST00000543510 SMARCA5O60264 1052 aaPredicted RBP18.47■□□□□ 0.55
TMEM258-207ENST00000543510 G3BP1Q13283 466 aaKnown RBP eCLIP18.47■□□□□ 0.55
TMEM258-207ENST00000543510 NLRP3Q96P20 1036 aa18.47■□□□□ 0.55
TMEM258-207ENST00000543510 ANKRD18BA2A2Z9 1011 aa18.46■□□□□ 0.55
TMEM258-207ENST00000543510 CSF1RP07333 972 aa18.46■□□□□ 0.55
TMEM258-207ENST00000543510 ITGA6P23229 1130 aa18.46■□□□□ 0.55
TMEM258-207ENST00000543510 CCDC152Q4G0S7 254 aa18.46■□□□□ 0.55
TMEM258-207ENST00000543510 C3orf67Q6ZVT6 689 aa18.46■□□□□ 0.55
TMEM258-207ENST00000543510 TAF1P21675 1872 aa18.46■□□□□ 0.55
TMEM258-207ENST00000543510 TNRC6CQ9HCJ0 1690 aaKnown RBP18.45■□□□□ 0.54
TMEM258-207ENST00000543510 ZBTB7AO95365 584 aa18.45■□□□□ 0.54
TMEM258-207ENST00000543510 RFX5P48382 616 aaPredicted RBP18.44■□□□□ 0.54
TMEM258-207ENST00000543510 PTPN12Q05209 780 aaKnown RBP18.44■□□□□ 0.54
TMEM258-207ENST00000543510 BMP2KLQ5H9B9 411 aa18.44■□□□□ 0.54
TMEM258-207ENST00000543510 PLEKHM2Q8IWE5 1019 aa18.44■□□□□ 0.54
TMEM258-207ENST00000543510 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
TMEM258-207ENST00000543510 HSP90AB4PQ58FF6 505 aa18.44■□□□□ 0.54
TMEM258-207ENST00000543510 SLC10A5Q5PT55 438 aa18.44■□□□□ 0.54
TMEM258-207ENST00000543510 SEC31BQ9NQW1 1179 aa18.44■□□□□ 0.54
TMEM258-207ENST00000543510 RAB11FIP3O75154 756 aa18.43■□□□□ 0.54
TMEM258-207ENST00000543510 LRRCC1Q9C099 1032 aa18.43■□□□□ 0.54
TMEM258-207ENST00000543510 IL1RAPL2Q9NP60 686 aa18.43■□□□□ 0.54
TMEM258-207ENST00000543510 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
TMEM258-207ENST00000543510 COPRSQ9NQ92 184 aa18.42■□□□□ 0.54
TMEM258-207ENST00000543510 SLC16A10Q8TF71 515 aa18.41■□□□□ 0.54
TMEM258-207ENST00000543510 PUS3Q9BZE2 481 aaKnown RBP18.41■□□□□ 0.54
TMEM258-207ENST00000543510 CNNM1Q9NRU3 951 aa18.41■□□□□ 0.54
TMEM258-207ENST00000543510 NRXN2Q9P2S2 1712 aa18.41■□□□□ 0.54
TMEM258-207ENST00000543510 ANKRD31Q8N7Z5 1873 aa18.41■□□□□ 0.54
TMEM258-207ENST00000543510 SEC24BO95487 1268 aa18.41■□□□□ 0.54
TMEM258-207ENST00000543510 SF3B3Q15393 1217 aaKnown RBP18.41■□□□□ 0.54
TMEM258-207ENST00000543510 LRRC24Q50LG9 513 aa18.41■□□□□ 0.54
TMEM258-207ENST00000543510 RHPN1Q8TCX5 695 aa18.41■□□□□ 0.54
TMEM258-207ENST00000543510 NOP58Q9Y2X3 529 aaKnown RBP18.41■□□□□ 0.54
TMEM258-207ENST00000543510 LDHAL6AQ6ZMR3 332 aa18.4■□□□□ 0.54
TMEM258-207ENST00000543510 ERC1Q8IUD2 1116 aa18.4■□□□□ 0.54
TMEM258-207ENST00000543510 RPGRQ92834 1020 aaKnown RBP18.4■□□□□ 0.54
TMEM258-207ENST00000543510 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
TMEM258-207ENST00000543510 MPHOSPH8Q99549 860 aa18.4■□□□□ 0.54
TMEM258-207ENST00000543510 EYA2O00167 538 aa18.39■□□□□ 0.53
TMEM258-207ENST00000543510 IGHMBP2P38935 993 aaKnown RBP18.39■□□□□ 0.53
TMEM258-207ENST00000543510 DDX46Q7L014 1031 aaKnown RBP18.39■□□□□ 0.53
TMEM258-207ENST00000543510 OTUD7AQ8TE49 926 aaPredicted RBP18.39■□□□□ 0.53
TMEM258-207ENST00000543510 TTC22Q5TAA0 569 aa18.38■□□□□ 0.53
TMEM258-207ENST00000543510 CDC5LQ99459 802 aaKnown RBP18.38■□□□□ 0.53
TMEM258-207ENST00000543510 TFCP2Q12800 502 aa18.38■□□□□ 0.53
TMEM258-207ENST00000543510 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
TMEM258-207ENST00000543510 IPO9Q96P70 1041 aaKnown RBP18.38■□□□□ 0.53
TMEM258-207ENST00000543510 OSBPL3Q9H4L5 887 aa18.38■□□□□ 0.53
TMEM258-207ENST00000543510 SASH1O94885 1247 aa18.37■□□□□ 0.53
TMEM258-207ENST00000543510 POLD1P28340 1107 aa18.37■□□□□ 0.53
TMEM258-207ENST00000543510 BRIP1Q9BX63 1249 aa18.37■□□□□ 0.53
TMEM258-207ENST00000543510 MTFR1LQ9H019 292 aa18.37■□□□□ 0.53
TMEM258-207ENST00000543510 UPF2Q9HAU5 1272 aaKnown RBP18.37■□□□□ 0.53
TMEM258-207ENST00000543510 CACNA1SQ13698 1873 aa18.36■□□□□ 0.53
TMEM258-207ENST00000543510 COL4A1P02462 1669 aa18.36■□□□□ 0.53
TMEM258-207ENST00000543510 IL15P40933 162 aaPredicted RBP18.36■□□□□ 0.53
TMEM258-207ENST00000543510 METTL24Q5JXM2 366 aa18.36■□□□□ 0.53
TMEM258-207ENST00000543510 CLASRPQ8N2M8 674 aaKnown RBP18.36■□□□□ 0.53
TMEM258-207ENST00000543510 CELF1Q92879 486 aaKnown RBP18.36■□□□□ 0.53
TMEM258-207ENST00000543510 RTL9Q8NET4 1388 aa18.36■□□□□ 0.53
TMEM258-207ENST00000543510 GSPT1P15170 499 aaKnown RBP18.35■□□□□ 0.53
TMEM258-207ENST00000543510 PDE6BP35913 854 aa18.35■□□□□ 0.53
TMEM258-207ENST00000543510 PDE1AP54750 535 aa18.35■□□□□ 0.53
TMEM258-207ENST00000543510 ATG9AQ7Z3C6 839 aa18.35■□□□□ 0.53
TMEM258-207ENST00000543510 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
TMEM258-207ENST00000543510 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
TMEM258-207ENST00000543510 RIC1Q4ADV7 1423 aa18.35■□□□□ 0.53
TMEM258-207ENST00000543510 CIAO1O76071 339 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms