RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
NPIPB4-217ENST00000543449 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
NPIPB4-217ENST00000543449 LARGE2Q8N3Y3 721 aa13.12□□□□□ -0.31
NPIPB4-217ENST00000543449 MPNDQ8N594 471 aa13.12□□□□□ -0.31
NPIPB4-217ENST00000543449 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
NPIPB4-217ENST00000543449 ZNF521Q96K83 1311 aa13.12□□□□□ -0.31
NPIPB4-217ENST00000543449 CACNA1FO60840 1977 aa13.11□□□□□ -0.31
NPIPB4-217ENST00000543449 FZD9O00144 591 aa13.11□□□□□ -0.31
NPIPB4-217ENST00000543449 APLP1P51693 650 aa13.11□□□□□ -0.31
NPIPB4-217ENST00000543449 NIM1KQ8IY84 436 aa13.11□□□□□ -0.31
NPIPB4-217ENST00000543449 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
NPIPB4-217ENST00000543449 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
NPIPB4-217ENST00000543449 SNED1Q8TER0 1413 aa13.11□□□□□ -0.31
NPIPB4-217ENST00000543449 WDR90Q96KV7 1748 aa13.1□□□□□ -0.31
NPIPB4-217ENST00000543449 GPC2Q8N158 579 aa13.1□□□□□ -0.31
NPIPB4-217ENST00000543449 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
NPIPB4-217ENST00000543449 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
NPIPB4-217ENST00000543449 NEURL1BA8MQ27 555 aa13.09□□□□□ -0.31
NPIPB4-217ENST00000543449 TCERG1O14776 1098 aaKnown RBP13.09□□□□□ -0.31
NPIPB4-217ENST00000543449 PPIP5K2O43314 1243 aa13.09□□□□□ -0.31
NPIPB4-217ENST00000543449 RPS8P62241 208 aaKnown RBP13.09□□□□□ -0.31
NPIPB4-217ENST00000543449 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
NPIPB4-217ENST00000543449 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
NPIPB4-217ENST00000543449 EYA3Q99504 573 aa13.09□□□□□ -0.31
NPIPB4-217ENST00000543449 GOLGB1Q14789 3259 aaKnown RBP13.08□□□□□ -0.31
NPIPB4-217ENST00000543449 LAMB2P55268 1798 aa13.08□□□□□ -0.32
NPIPB4-217ENST00000543449 DDNO94850 711 aaPredicted RBP13.08□□□□□ -0.32
NPIPB4-217ENST00000543449 IGKV5-2P06315 115 aa13.08□□□□□ -0.32
NPIPB4-217ENST00000543449 CT47B1P0C2W7 299 aaPredicted RBP13.08□□□□□ -0.32
NPIPB4-217ENST00000543449 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
NPIPB4-217ENST00000543449 RTL5Q5HYW3 569 aaPredicted RBP13.08□□□□□ -0.32
NPIPB4-217ENST00000543449 PNMA8AQ86V59 439 aaPredicted RBP13.08□□□□□ -0.32
NPIPB4-217ENST00000543449 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
NPIPB4-217ENST00000543449 H7C1W4 665 aa13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 LMOD1P29536 600 aaPredicted RBP13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 CTSWP56202 376 aa13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 GCKRQ14397 625 aa13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 G2E3Q7L622 706 aa13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 ANKRD18AQ8IVF6 992 aa13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 PLA2G12BQ9BX93 195 aa13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 HACL1Q9UJ83 578 aa13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 ZNRF3Q9ULT6 936 aa13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 DDX60Q8IY21 1712 aaKnown RBP13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
NPIPB4-217ENST00000543449 SLFN5Q08AF3 891 aa13.06□□□□□ -0.32
NPIPB4-217ENST00000543449 TNIP1Q15025 636 aa13.06□□□□□ -0.32
NPIPB4-217ENST00000543449 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
NPIPB4-217ENST00000543449 NSFL1CQ9UNZ2 370 aaKnown RBP13.06□□□□□ -0.32
NPIPB4-217ENST00000543449 POTECB2RU33 542 aa13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 ALDH1L1O75891 902 aa13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 AOC3Q16853 763 aa13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 WASHC4Q2M389 1173 aa13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 LDHDQ86WU2 507 aa13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 TAF1DQ9H5J8 278 aaPredicted RBP13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 PODXL2Q9NZ53 605 aa13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 PTPRCP08575 1304 aa13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 ZNF541Q9H0D2 1346 aa13.05□□□□□ -0.32
NPIPB4-217ENST00000543449 SCN4AP35499 1836 aa13.04□□□□□ -0.32
NPIPB4-217ENST00000543449 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
NPIPB4-217ENST00000543449 IGHMBP2P38935 993 aaKnown RBP13.04□□□□□ -0.32
NPIPB4-217ENST00000543449 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
NPIPB4-217ENST00000543449 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
NPIPB4-217ENST00000543449 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
NPIPB4-217ENST00000543449 ANKIB1Q9P2G1 1089 aa13.04□□□□□ -0.32
NPIPB4-217ENST00000543449 LRRC37AA6NMS7 1700 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 G3V3G9 751 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 EPHX2P34913 555 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 BEND3Q5T5X7 828 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 ZC3H12CQ9C0D7 883 aaKnown RBP13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 BSDC1Q9NW68 430 aaPredicted RBP13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 GGA1Q9UJY5 639 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 GJA3Q9Y6H8 435 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 XDHP47989 1333 aa13.03□□□□□ -0.32
NPIPB4-217ENST00000543449 ATP2B4P23634 1241 aa13.02□□□□□ -0.33
NPIPB4-217ENST00000543449 GPSM2P81274 684 aa13.02□□□□□ -0.33
NPIPB4-217ENST00000543449 SEC31BQ9NQW1 1179 aa13.02□□□□□ -0.33
NPIPB4-217ENST00000543449 C9orf78Q9NZ63 289 aaPredicted RBP13.02□□□□□ -0.33
NPIPB4-217ENST00000543449 CSF1RP07333 972 aa13.01□□□□□ -0.33
NPIPB4-217ENST00000543449 USP50Q70EL3 339 aaPredicted RBP13.01□□□□□ -0.33
NPIPB4-217ENST00000543449 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
NPIPB4-217ENST00000543449 MPHOSPH8Q99549 860 aa13.01□□□□□ -0.33
NPIPB4-217ENST00000543449 ANKRD2Q9GZV1 360 aa13.01□□□□□ -0.33
NPIPB4-217ENST00000543449 ANKRD18BA2A2Z9 1011 aa13□□□□□ -0.33
NPIPB4-217ENST00000543449 F6X3S4 739 aa13□□□□□ -0.33
NPIPB4-217ENST00000543449 GRM8O00222 908 aa13□□□□□ -0.33
NPIPB4-217ENST00000543449 UFL1O94874 794 aa13□□□□□ -0.33
NPIPB4-217ENST00000543449 RPS12P25398 132 aaKnown RBP13□□□□□ -0.33
NPIPB4-217ENST00000543449 CASP7P55210 303 aa13□□□□□ -0.33
NPIPB4-217ENST00000543449 CXCL9Q07325 125 aa13□□□□□ -0.33
NPIPB4-217ENST00000543449 EAPPQ56P03 285 aaPredicted RBP13□□□□□ -0.33
NPIPB4-217ENST00000543449 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
NPIPB4-217ENST00000543449 TRMT2AQ8IZ69 625 aaKnown RBP13□□□□□ -0.33
NPIPB4-217ENST00000543449 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms