RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 KIF1BPQ96EK5 621 aa16.92■□□□□ 0.3
PRAME-214ENST00000543184 LMO7Q8WWI1 1683 aa16.91■□□□□ 0.3
PRAME-214ENST00000543184 HMGN5P82970 282 aaKnown RBP16.91■□□□□ 0.3
PRAME-214ENST00000543184 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
PRAME-214ENST00000543184 MTERF4Q7Z6M4 381 aaKnown RBP16.91■□□□□ 0.3
PRAME-214ENST00000543184 DRC7Q8IY82 874 aa16.91■□□□□ 0.3
PRAME-214ENST00000543184 C16orf45Q96MC5 204 aaPredicted RBP16.91■□□□□ 0.3
PRAME-214ENST00000543184 SPTLC3Q9NUV7 552 aa16.91■□□□□ 0.3
PRAME-214ENST00000543184 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
PRAME-214ENST00000543184 CCDC186Q7Z3E2 898 aa16.91■□□□□ 0.3
PRAME-214ENST00000543184 FNBP4Q8N3X1 1017 aaPredicted RBP16.91■□□□□ 0.3
PRAME-214ENST00000543184 CCDC8Q9H0W5 538 aaPredicted RBP16.91■□□□□ 0.3
PRAME-214ENST00000543184 POLA2Q14181 598 aa16.9■□□□□ 0.3
PRAME-214ENST00000543184 DDX11Q96FC9 970 aa16.9■□□□□ 0.3
PRAME-214ENST00000543184 COL22A1Q8NFW1 1626 aaPredicted RBP16.9■□□□□ 0.3
PRAME-214ENST00000543184 CHGBP05060 677 aa16.9■□□□□ 0.3
PRAME-214ENST00000543184 NFATC2IPQ8NCF5 419 aa16.9■□□□□ 0.3
PRAME-214ENST00000543184 PHKG2P15735 406 aa16.89■□□□□ 0.3
PRAME-214ENST00000543184 CEBPZQ03701 1054 aaKnown RBP16.89■□□□□ 0.3
PRAME-214ENST00000543184 DACT1Q9NYF0 836 aa16.89■□□□□ 0.3
PRAME-214ENST00000543184 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.3
PRAME-214ENST00000543184 NDUFB9Q9Y6M9 179 aa16.89■□□□□ 0.3
PRAME-214ENST00000543184 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 SLIT2O94813 1529 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 RAB11FIP3O75154 756 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 DDB1Q16531 1140 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 CWF19L2Q2TBE0 894 aaKnown RBP16.89■□□□□ 0.29
PRAME-214ENST00000543184 EDC3Q96F86 508 aaKnown RBP16.89■□□□□ 0.29
PRAME-214ENST00000543184 SIL1Q9H173 461 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 MRVI1Q9Y6F6 885 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 PRAMEF22A3QJZ6 481 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 EXOC5O00471 708 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 ANO6Q4KMQ2 910 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 PDCL2Q8N4E4 241 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 KLHDC4Q8TBB5 520 aa16.89■□□□□ 0.29
PRAME-214ENST00000543184 RBM8AQ9Y5S9 174 aaKnown RBP16.89■□□□□ 0.29
PRAME-214ENST00000543184 LETM1O95202 739 aaPredicted RBP16.88■□□□□ 0.29
PRAME-214ENST00000543184 CCDC192P0DO97 292 aa16.88■□□□□ 0.29
PRAME-214ENST00000543184 TEFQ10587 303 aa16.88■□□□□ 0.29
PRAME-214ENST00000543184 PTF1AQ7RTS3 328 aa16.88■□□□□ 0.29
PRAME-214ENST00000543184 IL17RAQ96F46 866 aa16.88■□□□□ 0.29
PRAME-214ENST00000543184 TLR7Q9NYK1 1049 aaKnown RBP16.88■□□□□ 0.29
PRAME-214ENST00000543184 TYRO3Q06418 890 aa16.88■□□□□ 0.29
PRAME-214ENST00000543184 MAP3K5Q99683 1374 aa16.88■□□□□ 0.29
PRAME-214ENST00000543184 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 AACSQ86V21 672 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 GJD4Q96KN9 370 aaPredicted RBP16.87■□□□□ 0.29
PRAME-214ENST00000543184 ATP6V1DQ9Y5K8 247 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 NMIQ13287 307 aaPredicted RBP16.87■□□□□ 0.29
PRAME-214ENST00000543184 ARID5BQ14865 1188 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 PROSER3Q2NL68 480 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 AMOTQ4VCS5 1084 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 IFNL2Q8IZJ0 200 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 DNAAF4Q8WXU2 420 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 NUP62CLQ9H1M0 184 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 BOLA2Q9H3K6 86 aa16.87■□□□□ 0.29
PRAME-214ENST00000543184 GTF2F1P35269 517 aaKnown RBP eCLIP16.86■□□□□ 0.292e-7■■■■□ 20.3
PRAME-214ENST00000543184 AKAP4Q5JQC9 854 aa16.86■□□□□ 0.29
PRAME-214ENST00000543184 CREB3L3Q68CJ9 461 aa16.86■□□□□ 0.29
PRAME-214ENST00000543184 ZNF592Q92610 1267 aa16.86■□□□□ 0.29
PRAME-214ENST00000543184 CBX8Q9HC52 389 aa16.86■□□□□ 0.29
PRAME-214ENST00000543184 PLCH1Q4KWH8 1693 aa16.86■□□□□ 0.29
PRAME-214ENST00000543184 AOX1Q06278 1338 aa16.86■□□□□ 0.29
PRAME-214ENST00000543184 DMTNQ08495 405 aa16.86■□□□□ 0.29
PRAME-214ENST00000543184 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
PRAME-214ENST00000543184 TRIM5Q9C035 493 aa16.86■□□□□ 0.29
PRAME-214ENST00000543184 ZSWIM6Q9HCJ5 1215 aa16.86■□□□□ 0.29
PRAME-214ENST00000543184 COL14A1Q05707 1796 aaKnown RBP16.85■□□□□ 0.29
PRAME-214ENST00000543184 RNMTO43148 476 aaKnown RBP16.85■□□□□ 0.29
PRAME-214ENST00000543184 IFIT2P09913 472 aaKnown RBP16.85■□□□□ 0.29
PRAME-214ENST00000543184 VPS72Q15906 364 aa16.85■□□□□ 0.29
PRAME-214ENST00000543184 MAP3K11Q16584 847 aa16.85■□□□□ 0.29
PRAME-214ENST00000543184 DNAJC25Q9H1X3 360 aa16.85■□□□□ 0.29
PRAME-214ENST00000543184 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
PRAME-214ENST00000543184 KCNQ2O43526 872 aa16.85■□□□□ 0.29
PRAME-214ENST00000543184 JAK2O60674 1132 aa16.85■□□□□ 0.29
PRAME-214ENST00000543184 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
PRAME-214ENST00000543184 GLRX3O76003 335 aaKnown RBP16.85■□□□□ 0.29
PRAME-214ENST00000543184 VPS53Q5VIR6 699 aa16.85■□□□□ 0.29
PRAME-214ENST00000543184 ERCC4Q92889 916 aaPredicted RBP16.85■□□□□ 0.29
PRAME-214ENST00000543184 TNMDQ9H2S6 317 aa16.85■□□□□ 0.29
PRAME-214ENST00000543184 UTRNP46939 3433 aa16.85■□□□□ 0.29
PRAME-214ENST00000543184 A0A0D9SFI3 127 aa16.84■□□□□ 0.29
PRAME-214ENST00000543184 NR1I2O75469 434 aa16.84■□□□□ 0.29
PRAME-214ENST00000543184 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
PRAME-214ENST00000543184 NECTIN1Q15223 517 aa16.84■□□□□ 0.29
PRAME-214ENST00000543184 MARCH10Q8NA82 808 aaPredicted RBP16.84■□□□□ 0.29
PRAME-214ENST00000543184 LRRC2Q9BYS8 371 aa16.84■□□□□ 0.29
PRAME-214ENST00000543184 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
PRAME-214ENST00000543184 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.84■□□□□ 0.29
PRAME-214ENST00000543184 V9GYY5 206 aaPredicted RBP16.84■□□□□ 0.29
PRAME-214ENST00000543184 GOLGA6L4A6NEF3 574 aa16.84■□□□□ 0.29
PRAME-214ENST00000543184 PIP4K2AP48426 406 aaPredicted RBP16.84■□□□□ 0.29
PRAME-214ENST00000543184 KCNQ4P56696 695 aa16.84■□□□□ 0.29
PRAME-214ENST00000543184 FAM200AQ8TCP9 573 aa16.84■□□□□ 0.29
PRAME-214ENST00000543184 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
PRAME-214ENST00000543184 KRT85P78386 507 aa16.83■□□□□ 0.29
PRAME-214ENST00000543184 CHAF1AQ13111 956 aaPredicted RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms