RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 ARHGAP29Q52LW3 1261 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 LARP1Q6PKG0 1096 aaKnown RBP11.4□□□□□ -0.58
TCF4-208ENST00000543082 PPP1R42Q7Z4L9 355 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 ALDH8A1Q9H2A2 487 aaPredicted RBP11.4□□□□□ -0.58
TCF4-208ENST00000543082 ANO10Q9NW15 660 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 NPHP1O15259 732 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 GPS2Q13227 327 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 CREB3L3Q68CJ9 461 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 WAPLQ7Z5K2 1190 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 PPP1R13BQ96KQ4 1090 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 EFCC1Q9HA90 598 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 CFAP45Q9UL16 551 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 RBM8AQ9Y5S9 174 aaKnown RBP11.39□□□□□ -0.59
TCF4-208ENST00000543082 CCP110O43303 1012 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 TPM1P09493 284 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 CEP57L1Q8IYX8 460 aa11.39□□□□□ -0.59
TCF4-208ENST00000543082 ADCY9O60503 1353 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 RESTQ13127 1097 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 BLOC1S2Q6QNY1 142 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 SYT10Q6XYQ8 523 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 DHX40Q8IX18 779 aaKnown RBP11.38□□□□□ -0.59
TCF4-208ENST00000543082 GPATCH3Q96I76 525 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 TRERF1Q96PN7 1200 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 SRRTQ9BXP5 876 aaKnown RBP11.38□□□□□ -0.59
TCF4-208ENST00000543082 NAT10Q9H0A0 1025 aaKnown RBP11.38□□□□□ -0.59
TCF4-208ENST00000543082 ORC3Q9UBD5 711 aaPredicted RBP11.38□□□□□ -0.59
TCF4-208ENST00000543082 STAG3Q9UJ98 1225 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 PHLPP2Q6ZVD8 1323 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 HIP1O00291 1037 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 E4F1Q66K89 784 aaPredicted RBP11.38□□□□□ -0.59
TCF4-208ENST00000543082 UBXN4Q92575 508 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 RASSF4Q9H2L5 321 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
TCF4-208ENST00000543082 CWC15Q9P013 229 aaKnown RBP11.38□□□□□ -0.59
TCF4-208ENST00000543082 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
TCF4-208ENST00000543082 NUDT16Q96DE0 195 aaKnown RBP11.37□□□□□ -0.59
TCF4-208ENST00000543082 SLC27A2O14975 620 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 SRGAP3O43295 1099 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 RPS6KB1P23443 525 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 IRX3P78415 501 aaPredicted RBP11.36□□□□□ -0.59
TCF4-208ENST00000543082 CCDC73Q6ZRK6 1079 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 NEK11Q8NG66 645 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 MAP4K1Q92918 833 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 EVI5LQ96CN4 794 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 UBXN6Q9BZV1 441 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 OVOS2A0A0J9YW53 1432 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 OVOS2Q6IE36 1432 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 NRXN3Q9Y4C0 1643 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 KINO60870 393 aaKnown RBP11.36□□□□□ -0.59
TCF4-208ENST00000543082 TNNT3P45378 269 aaPredicted RBP11.36□□□□□ -0.59
TCF4-208ENST00000543082 AOPEPQ8N6M6 819 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 LRRN4CLQ8ND94 238 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 MNS1Q8NEH6 495 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 ECHDC1Q9NTX5 307 aa11.36□□□□□ -0.59
TCF4-208ENST00000543082 POLR3GO15318 223 aaPredicted RBP11.35□□□□□ -0.59
TCF4-208ENST00000543082 SFPQP23246 707 aaKnown RBP eCLIP11.35□□□□□ -0.59
TCF4-208ENST00000543082 CCDC158Q5M9N0 1113 aa11.35□□□□□ -0.59
TCF4-208ENST00000543082 KRBA2Q6ZNG9 492 aa11.35□□□□□ -0.59
TCF4-208ENST00000543082 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
TCF4-208ENST00000543082 DDX54Q8TDD1 881 aaKnown RBP11.35□□□□□ -0.59
TCF4-208ENST00000543082 SIRT1Q96EB6 747 aa11.35□□□□□ -0.59
TCF4-208ENST00000543082 A2ML1A8K2U0 1454 aa11.35□□□□□ -0.59
TCF4-208ENST00000543082 H3BQV1 296 aa11.35□□□□□ -0.59
TCF4-208ENST00000543082 ETF1P62495 437 aaKnown RBP11.35□□□□□ -0.59
TCF4-208ENST00000543082 TOB2Q14106 344 aaPredicted RBP11.35□□□□□ -0.59
TCF4-208ENST00000543082 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
TCF4-208ENST00000543082 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
TCF4-208ENST00000543082 CCAR1Q8IX12 1150 aaKnown RBP11.35□□□□□ -0.59
TCF4-208ENST00000543082 CLASRPQ8N2M8 674 aaKnown RBP11.35□□□□□ -0.59
TCF4-208ENST00000543082 SNRKQ9NRH2 765 aa11.35□□□□□ -0.59
TCF4-208ENST00000543082 TECPR2O15040 1411 aa11.35□□□□□ -0.59
TCF4-208ENST00000543082 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
TCF4-208ENST00000543082 TOPAZ1Q8N9V7 1692 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 EFCAB8A8MWE9 144 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 TADA3O75528 432 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 OS9Q13438 667 aaPredicted RBP11.34□□□□□ -0.59
TCF4-208ENST00000543082 CTR9Q6PD62 1173 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 HOMER1Q86YM7 354 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 BRF1Q92994 677 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 AK7Q96M32 723 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 HMG20BQ9P0W2 317 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 FOXO3O43524 673 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 OAS2P29728 719 aaKnown RBP11.34□□□□□ -0.59
TCF4-208ENST00000543082 FAM160A1Q05DH4 1040 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 SMARCE1Q969G3 411 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 DNAI1Q9UI46 699 aa11.34□□□□□ -0.59
TCF4-208ENST00000543082 KDRP35968 1356 aa11.33□□□□□ -0.59
TCF4-208ENST00000543082 USP31Q70CQ4 1352 aa11.33□□□□□ -0.59
TCF4-208ENST00000543082 CEP170BQ9Y4F5 1589 aaPredicted RBP11.33□□□□□ -0.6
TCF4-208ENST00000543082 MAP3K19Q56UN5 1328 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 RAPGEF3O95398 923 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
TCF4-208ENST00000543082 ZSCAN26Q16670 478 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 LRRFIP1Q32MZ4 808 aaKnown RBP11.33□□□□□ -0.6
TCF4-208ENST00000543082 ATL3Q6DD88 541 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 ARMCX5Q6P1M9 558 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 TMC6Q7Z403 805 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 BPIFA3Q9BQP9 254 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms