RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 ECM1Q16610 540 aa7.41□□□□□ -1.22
MDM2-229ENST00000543046 STK17AQ9UEE5 414 aa7.41□□□□□ -1.22
MDM2-229ENST00000543046 FNDC3AQ9Y2H6 1198 aaKnown RBP7.41□□□□□ -1.22
MDM2-229ENST00000543046 ELOA3CA0A087WX78 387 aaPredicted RBP7.4□□□□□ -1.22
MDM2-229ENST00000543046 SOWAHDA6NJG2 315 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 ELOA3DA6NLF2 546 aaPredicted RBP7.4□□□□□ -1.22
MDM2-229ENST00000543046 ADARB2-AS1A8MUL3 147 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 FZD6O60353 706 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 PCSK2P16519 638 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 ELOA3BQ3SY89 546 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 AEBP1Q8IUX7 1158 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 ELOA3Q8NG57 546 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 NEDD1Q8NHV4 660 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 MDFIQ99750 246 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 UBE2OQ9C0C9 1292 aaKnown RBP7.4□□□□□ -1.22
MDM2-229ENST00000543046 POLIQ9UNA4 740 aa7.4□□□□□ -1.22
MDM2-229ENST00000543046 PATL2C9JE40 543 aaKnown RBP7.39□□□□□ -1.23
MDM2-229ENST00000543046 MAP3K6O95382 1288 aa7.39□□□□□ -1.23
MDM2-229ENST00000543046 RPLP1P05386 114 aaKnown RBP7.39□□□□□ -1.23
MDM2-229ENST00000543046 ADH7P40394 386 aa7.39□□□□□ -1.23
MDM2-229ENST00000543046 ARHGAP4P98171 946 aa7.39□□□□□ -1.23
MDM2-229ENST00000543046 TBC1D8BQ0IIM8 1120 aa7.39□□□□□ -1.23
MDM2-229ENST00000543046 NLRP13Q86W25 1043 aa7.39□□□□□ -1.23
MDM2-229ENST00000543046 IGFLR1Q9H665 355 aa7.39□□□□□ -1.23
MDM2-229ENST00000543046 CCDC87Q9NVE4 849 aa7.39□□□□□ -1.23
MDM2-229ENST00000543046 ADAMTS8Q9UP79 889 aa7.39□□□□□ -1.23
MDM2-229ENST00000543046 ALAS2P22557 587 aa7.38□□□□□ -1.23
MDM2-229ENST00000543046 AMPD1P23109 780 aa7.38□□□□□ -1.23
MDM2-229ENST00000543046 C8orf34Q49A92 452 aa7.38□□□□□ -1.23
MDM2-229ENST00000543046 DHX32Q7L7V1 743 aaKnown RBP7.38□□□□□ -1.23
MDM2-229ENST00000543046 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
MDM2-229ENST00000543046 GGNBP2Q9H3C7 697 aa7.38□□□□□ -1.23
MDM2-229ENST00000543046 A6NHS1 94 aa7.37□□□□□ -1.23
MDM2-229ENST00000543046 MMP20O60882 483 aa7.37□□□□□ -1.23
MDM2-229ENST00000543046 PDE12Q6L8Q7 609 aaKnown RBP7.37□□□□□ -1.23
MDM2-229ENST00000543046 CHSY3Q70JA7 882 aa7.37□□□□□ -1.23
MDM2-229ENST00000543046 KCTD17Q8N5Z5 321 aa7.37□□□□□ -1.23
MDM2-229ENST00000543046 TTC16Q8NEE8 873 aa7.37□□□□□ -1.23
MDM2-229ENST00000543046 DNAJB12Q9NXW2 375 aaKnown RBP7.37□□□□□ -1.23
MDM2-229ENST00000543046 TLR7Q9NYK1 1049 aaKnown RBP7.37□□□□□ -1.23
MDM2-229ENST00000543046 USP5P45974 858 aa7.36□□□□□ -1.23
MDM2-229ENST00000543046 ZNF438Q7Z4V0 828 aa7.36□□□□□ -1.23
MDM2-229ENST00000543046 HOMEZQ8IX15 550 aa7.36□□□□□ -1.23
MDM2-229ENST00000543046 ELP3Q9H9T3 547 aa7.36□□□□□ -1.23
MDM2-229ENST00000543046 BIN2Q9UBW5 565 aaPredicted RBP7.36□□□□□ -1.23
MDM2-229ENST00000543046 BRPF3Q9ULD4 1205 aa7.36□□□□□ -1.23
MDM2-229ENST00000543046 SLC6A14Q9UN76 642 aa7.36□□□□□ -1.23
MDM2-229ENST00000543046 ZBTB42B2RXF5 422 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 NDUFB5O43674 189 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 PSAPP07602 524 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 MARSP56192 900 aaKnown RBP7.35□□□□□ -1.23
MDM2-229ENST00000543046 GPLD1P80108 840 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 PCSK7Q16549 785 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 TTC39BQ5VTQ0 682 aaPredicted RBP7.35□□□□□ -1.23
MDM2-229ENST00000543046 XKR5Q6UX68 686 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 GJD3Q8N144 294 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 TRPM4Q8TD43 1214 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 RRAGCQ9HB90 399 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 ABI2Q9NYB9 513 aaPredicted RBP7.35□□□□□ -1.23
MDM2-229ENST00000543046 TMEM63CQ9P1W3 806 aa7.35□□□□□ -1.23
MDM2-229ENST00000543046 SOX18P35713 384 aa7.34□□□□□ -1.23
MDM2-229ENST00000543046 NRLP54845 237 aa7.34□□□□□ -1.23
MDM2-229ENST00000543046 MLLT1Q03111 559 aaPredicted RBP7.34□□□□□ -1.23
MDM2-229ENST00000543046 PLAURQ03405 335 aa7.34□□□□□ -1.23
MDM2-229ENST00000543046 EHHADHQ08426 723 aa7.34□□□□□ -1.23
MDM2-229ENST00000543046 HOXB4P17483 251 aaPredicted RBP7.33□□□□□ -1.24
MDM2-229ENST00000543046 DGKGP49619 791 aa7.33□□□□□ -1.24
MDM2-229ENST00000543046 SNRPNP63162 240 aaKnown RBP7.33□□□□□ -1.24
MDM2-229ENST00000543046 KANK3Q6NY19 840 aa7.33□□□□□ -1.24
MDM2-229ENST00000543046 FAM35AQ86V20 835 aa7.33□□□□□ -1.24
MDM2-229ENST00000543046 OR13H1Q8NG92 308 aa7.33□□□□□ -1.24
MDM2-229ENST00000543046 NSUN5Q96P11 429 aaKnown RBP7.33□□□□□ -1.24
MDM2-229ENST00000543046 NAGPAQ9UK23 515 aa7.33□□□□□ -1.24
MDM2-229ENST00000543046 STARD13Q9Y3M8 1113 aa7.33□□□□□ -1.24
MDM2-229ENST00000543046 ALBP02768 609 aa7.32□□□□□ -1.24
MDM2-229ENST00000543046 HOXD8P13378 290 aaPredicted RBP7.32□□□□□ -1.24
MDM2-229ENST00000543046 CPB1P15086 417 aa7.32□□□□□ -1.24
MDM2-229ENST00000543046 HFE2Q6ZVN8 426 aa7.32□□□□□ -1.24
MDM2-229ENST00000543046 PODNQ7Z5L7 613 aa7.32□□□□□ -1.24
MDM2-229ENST00000543046 CNTNAP5Q8WYK1 1306 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 LOC102724428A0A0B4J2F2 783 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 M0R082 166 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 CYP2E1P05181 493 aaPredicted RBP7.31□□□□□ -1.24
MDM2-229ENST00000543046 SIK1P57059 783 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 C20orf204Q6ZNR8 217 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 MICALL1Q8N3F8 863 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 BEND7Q8N7W2 519 aaPredicted RBP7.31□□□□□ -1.24
MDM2-229ENST00000543046 ZNF417Q8TAU3 575 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 SCARF2Q96GP6 870 aaPredicted RBP7.31□□□□□ -1.24
MDM2-229ENST00000543046 CITED4Q96RK1 184 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 ZNF587Q96SQ5 575 aaPredicted RBP7.31□□□□□ -1.24
MDM2-229ENST00000543046 CNTN3Q9P232 1028 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 MKL2Q9ULH7 1088 aa7.31□□□□□ -1.24
MDM2-229ENST00000543046 J3QW42 95 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 TNFRSF21O75509 655 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 EIF2AK2P19525 551 aaKnown RBP7.3□□□□□ -1.24
MDM2-229ENST00000543046 HYAL2Q12891 473 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 PDE3BQ13370 1112 aa7.3□□□□□ -1.24
MDM2-229ENST00000543046 PERM1Q5SV97 790 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms