RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.77■□□□□ 0.76
KDM2B-216ENST00000543025 SLC27A2O14975 620 aa19.76■□□□□ 0.75
KDM2B-216ENST00000543025 MEGF6O75095 1541 aa19.76■□□□□ 0.75
KDM2B-216ENST00000543025 NECAB1Q8N987 351 aa19.76■□□□□ 0.75
KDM2B-216ENST00000543025 DDX54Q8TDD1 881 aaKnown RBP19.76■□□□□ 0.75
KDM2B-216ENST00000543025 PARP4Q9UKK3 1724 aaKnown RBP19.76■□□□□ 0.75
KDM2B-216ENST00000543025 KDM4AO75164 1064 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 ANKRD1Q15327 319 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 LARP1BQ659C4 914 aaKnown RBP19.75■□□□□ 0.75
KDM2B-216ENST00000543025 GIMAP6Q6P9H5 292 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 NGLY1Q96IV0 654 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 FSD1Q9BTV5 496 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 CARD10Q9BWT7 1032 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 WNK3Q9BYP7 1800 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.75■□□□□ 0.75
KDM2B-216ENST00000543025 ADAMTS7Q9UKP4 1686 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 PDIA6Q15084 440 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 BOLA2Q9H3K6 86 aa19.75■□□□□ 0.75
KDM2B-216ENST00000543025 TLR7Q9NYK1 1049 aaKnown RBP19.75■□□□□ 0.75
KDM2B-216ENST00000543025 A0A0D9SFI3 127 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 PDCP20941 246 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 MEX3CQ5U5Q3 659 aaKnown RBP19.74■□□□□ 0.75
KDM2B-216ENST00000543025 BLOC1S2Q6QNY1 142 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 RIC3Q7Z5B4 369 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 PIBF1Q8WXW3 757 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 DYNC1I1O14576 645 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 DTNBO60941 627 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 IGKV5-2P06315 115 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 KRT85P78386 507 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 SIL1Q9H173 461 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 BCL9LQ86UU0 1499 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 MED23Q9ULK4 1368 aa19.74■□□□□ 0.75
KDM2B-216ENST00000543025 NEXNQ0ZGT2 675 aa19.73■□□□□ 0.75
KDM2B-216ENST00000543025 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
KDM2B-216ENST00000543025 MRC1P22897 1456 aa19.73■□□□□ 0.75
KDM2B-216ENST00000543025 RBM10P98175 930 aaKnown RBP19.73■□□□□ 0.75
KDM2B-216ENST00000543025 MAP7D2Q96T17 732 aa19.73■□□□□ 0.75
KDM2B-216ENST00000543025 ALDH8A1Q9H2A2 487 aaPredicted RBP19.73■□□□□ 0.75
KDM2B-216ENST00000543025 FNBP4Q8N3X1 1017 aaPredicted RBP19.72■□□□□ 0.75
KDM2B-216ENST00000543025 RPS6KB1P23443 525 aa19.72■□□□□ 0.75
KDM2B-216ENST00000543025 RAPGEF4Q8WZA2 1011 aa19.72■□□□□ 0.75
KDM2B-216ENST00000543025 FAM13BQ9NYF5 915 aa19.72■□□□□ 0.75
KDM2B-216ENST00000543025 HMG20BQ9P0W2 317 aa19.72■□□□□ 0.75
KDM2B-216ENST00000543025 ELP1O95163 1332 aa19.72■□□□□ 0.75
KDM2B-216ENST00000543025 ZNF790Q6PG37 636 aa19.71■□□□□ 0.75
KDM2B-216ENST00000543025 CDC37L1Q7L3B6 337 aa19.71■□□□□ 0.75
KDM2B-216ENST00000543025 ZNF830Q96NB3 372 aaPredicted RBP19.71■□□□□ 0.75
KDM2B-216ENST00000543025 NEURL1BA8MQ27 555 aa19.71■□□□□ 0.75
KDM2B-216ENST00000543025 CCDC192P0DO97 292 aa19.71■□□□□ 0.75
KDM2B-216ENST00000543025 DNTTIP2Q5QJE6 756 aaKnown RBP19.71■□□□□ 0.75
KDM2B-216ENST00000543025 TTC6Q86TZ1 520 aa19.7■□□□□ 0.74
KDM2B-216ENST00000543025 MPNDQ8N594 471 aa19.7■□□□□ 0.74
KDM2B-216ENST00000543025 TATP17735 454 aaPredicted RBP19.7■□□□□ 0.74
KDM2B-216ENST00000543025 GCKRQ14397 625 aa19.7■□□□□ 0.74
KDM2B-216ENST00000543025 NOLC1Q14978 699 aaKnown RBP eCLIP19.7■□□□□ 0.74
KDM2B-216ENST00000543025 TSGA10IPQ3SY00 556 aa19.7■□□□□ 0.74
KDM2B-216ENST00000543025 KLHDC4Q8TBB5 520 aa19.7■□□□□ 0.74
KDM2B-216ENST00000543025 TTC12Q9H892 705 aaPredicted RBP19.7■□□□□ 0.74
KDM2B-216ENST00000543025 COL9A3Q14050 684 aaPredicted RBP19.69■□□□□ 0.74
KDM2B-216ENST00000543025 SHANK3Q9BYB0 1731 aa19.69■□□□□ 0.74
KDM2B-216ENST00000543025 MYL6BP14649 208 aa19.69■□□□□ 0.74
KDM2B-216ENST00000543025 PLCB2Q00722 1185 aa19.69■□□□□ 0.74
KDM2B-216ENST00000543025 TOB2Q14106 344 aaPredicted RBP19.69■□□□□ 0.74
KDM2B-216ENST00000543025 ZNF589Q86UQ0 364 aaPredicted RBP19.69■□□□□ 0.74
KDM2B-216ENST00000543025 PLEKHG2Q9H7P9 1386 aa19.68■□□□□ 0.74
KDM2B-216ENST00000543025 C5P01031 1676 aa19.68■□□□□ 0.74
KDM2B-216ENST00000543025 FERMT3Q86UX7 667 aa19.68■□□□□ 0.74
KDM2B-216ENST00000543025 TCEANC2Q96MN5 208 aa19.68■□□□□ 0.74
KDM2B-216ENST00000543025 SPATA31A1Q5TZJ5 1347 aa19.68■□□□□ 0.74
KDM2B-216ENST00000543025 SLC39A6Q13433 755 aa19.68■□□□□ 0.74
KDM2B-216ENST00000543025 METTL22Q9BUU2 404 aaPredicted RBP19.68■□□□□ 0.74
KDM2B-216ENST00000543025 SLC52A2Q9HAB3 445 aa19.68■□□□□ 0.74
KDM2B-216ENST00000543025 USP21Q9UK80 565 aa19.68■□□□□ 0.74
KDM2B-216ENST00000543025 DISP2A7MBM2 1401 aa19.68■□□□□ 0.74
KDM2B-216ENST00000543025 AFF2P51816 1311 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 SPATA31A5Q5VU36 1347 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 SPATA31A7Q8IWB4 1347 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 XAGE3Q8WTP9 111 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 MYD88Q99836 296 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 SCAND2PQ9GZW5 306 aaPredicted RBP19.67■□□□□ 0.74
KDM2B-216ENST00000543025 NUP62CLQ9H1M0 184 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 TAF6LQ9Y6J9 622 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 IL2RBP14784 551 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 KRT32Q14532 448 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 MAP3K11Q16584 847 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 EPHA10Q5JZY3 1008 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 MTERF4Q7Z6M4 381 aaKnown RBP19.67■□□□□ 0.74
KDM2B-216ENST00000543025 COPRSQ9NQ92 184 aa19.67■□□□□ 0.74
KDM2B-216ENST00000543025 TAF5LO75529 589 aa19.66■□□□□ 0.74
KDM2B-216ENST00000543025 USPL1Q5W0Q7 1092 aa19.66■□□□□ 0.74
KDM2B-216ENST00000543025 COPS6Q7L5N1 327 aa19.66■□□□□ 0.74
KDM2B-216ENST00000543025 PRIMPOLQ96LW4 560 aa19.66■□□□□ 0.74
KDM2B-216ENST00000543025 ATP5JP18859 108 aa19.66■□□□□ 0.74
KDM2B-216ENST00000543025 AP5Z1O43299 807 aa19.65■□□□□ 0.74
KDM2B-216ENST00000543025 TPM3P06753 285 aa19.65■□□□□ 0.74
KDM2B-216ENST00000543025 VPS72Q15906 364 aa19.65■□□□□ 0.74
KDM2B-216ENST00000543025 FAM173BQ6P4H8 233 aa19.65■□□□□ 0.74
KDM2B-216ENST00000543025 VSIG10Q8N0Z9 540 aa19.65■□□□□ 0.74
KDM2B-216ENST00000543025 MYRIPQ8NFW9 859 aa19.65■□□□□ 0.74
KDM2B-216ENST00000543025 FAM200AQ8TCP9 573 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms