RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 FBXW7Q969H0 707 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 USP44Q9H0E7 712 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 DDX41Q9UJV9 622 aaKnown RBP6.27□□□□□ -1.41
KDM3B-209ENST00000542866 USP21Q9UK80 565 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 CDK12Q9NYV4 1490 aaPredicted RBP6.27□□□□□ -1.41
KDM3B-209ENST00000542866 ANKRD26Q9UPS8 1709 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 SOS1Q07889 1333 aaPredicted RBP6.26□□□□□ -1.41
KDM3B-209ENST00000542866 CEBPZQ03701 1054 aaKnown RBP6.26□□□□□ -1.41
KDM3B-209ENST00000542866 GABPB1Q06547 395 aaPredicted RBP6.26□□□□□ -1.41
KDM3B-209ENST00000542866 ARID5BQ14865 1188 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 PI4K2BQ8TCG2 481 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 RUFY2Q8WXA3 655 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 SH2B1Q9NRF2 756 aaPredicted RBP6.26□□□□□ -1.41
KDM3B-209ENST00000542866 VGLL3A8MV65 326 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 RAB11FIP3O75154 756 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 PTPN14Q15678 1187 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 CCDC144BQ3MJ40 725 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 VPS53Q5VIR6 699 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 CCDC144CPQ8IYA2 1237 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 KRT222Q8N1A0 295 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 KIF1BPQ96EK5 621 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 ZNF215Q9UL58 517 aaPredicted RBP6.26□□□□□ -1.41
KDM3B-209ENST00000542866 SLFN14P0C7P3 912 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 IL2RBP14784 551 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 KIF18AQ8NI77 898 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 PHAXQ9H814 394 aaKnown RBP6.26□□□□□ -1.41
KDM3B-209ENST00000542866 TPCN1Q9ULQ1 816 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 USP31Q70CQ4 1352 aa6.26□□□□□ -1.41
KDM3B-209ENST00000542866 AOX1Q06278 1338 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 KIF20BQ96Q89 1820 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 USP27XA6NNY8 438 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 GNAT3A8MTJ3 354 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 BECN2A8MW95 431 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 EPB41L2O43491 1005 aaKnown RBP6.25□□□□□ -1.41
KDM3B-209ENST00000542866 NR1I2O75469 434 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 FOSBP53539 338 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 IL17RAQ96F46 866 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 TRERF1Q96PN7 1200 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 ZNF330Q9Y3S2 320 aaPredicted RBP6.25□□□□□ -1.41
KDM3B-209ENST00000542866 DLG5Q8TDM6 1919 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 SKILP12757 684 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 CABP4P57796 275 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 SYCP1Q15431 976 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 ELF2Q15723 593 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 LARP1Q6PKG0 1096 aaKnown RBP6.25□□□□□ -1.41
KDM3B-209ENST00000542866 SSH3Q8TE77 659 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 SCAND2PQ9GZW5 306 aaPredicted RBP6.25□□□□□ -1.41
KDM3B-209ENST00000542866 DDX19AQ9NUU7 478 aaKnown RBP6.25□□□□□ -1.41
KDM3B-209ENST00000542866 CCDC66A2RUB6 948 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 PDCP20941 246 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 ST3GAL1Q11201 340 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 TERF2Q15554 542 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 DDB1Q16531 1140 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 KMT5BQ4FZB7 885 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 PLA2G4DQ86XP0 818 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 IFNL2Q8IZJ0 200 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 ZNF397Q8NF99 534 aaPredicted RBP6.25□□□□□ -1.41
KDM3B-209ENST00000542866 ZCRB1Q8TBF4 217 aaKnown RBP6.25□□□□□ -1.41
KDM3B-209ENST00000542866 DDX11Q96FC9 970 aa6.25□□□□□ -1.41
KDM3B-209ENST00000542866 RBM8AQ9Y5S9 174 aaKnown RBP6.25□□□□□ -1.41
KDM3B-209ENST00000542866 MORC2Q9Y6X9 1032 aaPredicted RBP6.25□□□□□ -1.41
KDM3B-209ENST00000542866 CRB1P82279 1406 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 A0A087WWV3 80 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 GLRX3O76003 335 aaKnown RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 IFIT2P09913 472 aaKnown RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 NBPF7P0C2Y1 421 aaPredicted RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 HDGFL1Q5TGJ6 251 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 NBPF6Q5VWK0 638 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 CLASRPQ8N2M8 674 aaKnown RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 LEO1Q8WVC0 666 aaPredicted RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 NBPF4Q96M43 638 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 CLSTN2Q9H4D0 955 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 ZSWIM6Q9HCJ5 1215 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 ST7Q9NRC1 585 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 USP16Q9Y5T5 823 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 XRN1Q8IZH2 1706 aaKnown RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 SPATA31A6Q5VVP1 1343 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 STRCQ7RTU9 1775 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 H3BQV1 296 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 IFFO2Q5TF58 517 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 TMED8Q6PL24 325 aaPredicted RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 LRRC8AQ8IWT6 810 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 TDRD7Q8NHU6 1098 aaKnown RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 CDCA7Q9BWT1 371 aaPredicted RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 TMEM51Q9NW97 253 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 ERBB3P21860 1342 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 COL9A3Q14050 684 aaPredicted RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 TAF7Q15545 349 aaPredicted RBP6.24□□□□□ -1.41
KDM3B-209ENST00000542866 CREB3L3Q68CJ9 461 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 FBXO38Q6PIJ6 1188 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 BLOC1S2Q6QNY1 142 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 MPRIPQ6WCQ1 1025 aa6.24□□□□□ -1.41
KDM3B-209ENST00000542866 CCDC69A6NI79 296 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 PSMA5P28066 241 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 FAM98CQ17RN3 349 aaKnown RBP6.23□□□□□ -1.41
KDM3B-209ENST00000542866 GORABQ5T7V8 394 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 FAM227BQ96M60 508 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 WDR17Q8IZU2 1322 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 ANXA1P04083 346 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms