RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 COL4A1P02462 1669 aa19.73■□□□□ 0.75
ECHDC2-223ENST00000542552 GLTPD2A6NH11 291 aa19.73■□□□□ 0.75
ECHDC2-223ENST00000542552 C1QTNF8P60827 252 aa19.73■□□□□ 0.75
ECHDC2-223ENST00000542552 SP8Q8IXZ3 490 aa19.73■□□□□ 0.75
ECHDC2-223ENST00000542552 LINS1Q8NG48 757 aa19.73■□□□□ 0.75
ECHDC2-223ENST00000542552 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
ECHDC2-223ENST00000542552 NMRK2Q9NPI5 230 aa19.73■□□□□ 0.75
ECHDC2-223ENST00000542552 LRRC37AA6NMS7 1700 aa19.72■□□□□ 0.75
ECHDC2-223ENST00000542552 H7C1W4 665 aa19.72■□□□□ 0.75
ECHDC2-223ENST00000542552 PDE8AO60658 829 aa19.72■□□□□ 0.75
ECHDC2-223ENST00000542552 TMC4Q7Z404 712 aa19.72■□□□□ 0.75
ECHDC2-223ENST00000542552 IARSP41252 1262 aaKnown RBP19.71■□□□□ 0.75
ECHDC2-223ENST00000542552 GCKRQ14397 625 aa19.71■□□□□ 0.75
ECHDC2-223ENST00000542552 F6X3S4 739 aa19.7■□□□□ 0.74
ECHDC2-223ENST00000542552 MRPL50Q8N5N7 158 aaKnown RBP19.7■□□□□ 0.74
ECHDC2-223ENST00000542552 CELF1Q92879 486 aaKnown RBP19.7■□□□□ 0.74
ECHDC2-223ENST00000542552 RTFDC1Q9BY42 306 aaPredicted RBP19.7■□□□□ 0.74
ECHDC2-223ENST00000542552 MYH3P11055 1940 aa19.7■□□□□ 0.74
ECHDC2-223ENST00000542552 WDR90Q96KV7 1748 aa19.69■□□□□ 0.74
ECHDC2-223ENST00000542552 CASP7P55210 303 aa19.69■□□□□ 0.74
ECHDC2-223ENST00000542552 BEND3Q5T5X7 828 aa19.69■□□□□ 0.74
ECHDC2-223ENST00000542552 COL4A5P29400 1685 aa19.68■□□□□ 0.74
ECHDC2-223ENST00000542552 CCDC152Q4G0S7 254 aa19.68■□□□□ 0.74
ECHDC2-223ENST00000542552 DPY19L2Q6NUT2 758 aa19.68■□□□□ 0.74
ECHDC2-223ENST00000542552 SSH1Q8WYL5 1049 aa19.68■□□□□ 0.74
ECHDC2-223ENST00000542552 TMX4Q9H1E5 349 aaPredicted RBP19.68■□□□□ 0.74
ECHDC2-223ENST00000542552 RRAGCQ9HB90 399 aa19.68■□□□□ 0.74
ECHDC2-223ENST00000542552 CT47B1P0C2W7 299 aaPredicted RBP19.67■□□□□ 0.74
ECHDC2-223ENST00000542552 CTSWP56202 376 aa19.67■□□□□ 0.74
ECHDC2-223ENST00000542552 RPS8P62241 208 aaKnown RBP19.67■□□□□ 0.74
ECHDC2-223ENST00000542552 UBE3BQ7Z3V4 1068 aa19.67■□□□□ 0.74
ECHDC2-223ENST00000542552 PLA2G12BQ9BX93 195 aa19.67■□□□□ 0.74
ECHDC2-223ENST00000542552 VPS33BQ9H267 617 aa19.67■□□□□ 0.74
ECHDC2-223ENST00000542552 SEC31BQ9NQW1 1179 aa19.67■□□□□ 0.74
ECHDC2-223ENST00000542552 DUOX1Q9NRD9 1551 aa19.66■□□□□ 0.74
ECHDC2-223ENST00000542552 LTBP1Q14766 1721 aa19.66■□□□□ 0.74
ECHDC2-223ENST00000542552 POTECB2RU33 542 aa19.66■□□□□ 0.74
ECHDC2-223ENST00000542552 FZD9O00144 591 aa19.66■□□□□ 0.74
ECHDC2-223ENST00000542552 ALDH1L2Q3SY69 923 aa19.66■□□□□ 0.74
ECHDC2-223ENST00000542552 MPNDQ8N594 471 aa19.66■□□□□ 0.74
ECHDC2-223ENST00000542552 TTLL11Q8NHH1 800 aa19.66■□□□□ 0.74
ECHDC2-223ENST00000542552 RTL9Q8NET4 1388 aa19.66■□□□□ 0.74
ECHDC2-223ENST00000542552 TOMM70O94826 608 aa19.65■□□□□ 0.74
ECHDC2-223ENST00000542552 DPP8Q6V1X1 898 aaPredicted RBP19.65■□□□□ 0.74
ECHDC2-223ENST00000542552 SUPT20HQ8NEM7 779 aa19.65■□□□□ 0.74
ECHDC2-223ENST00000542552 DDNO94850 711 aaPredicted RBP19.64■□□□□ 0.73
ECHDC2-223ENST00000542552 VEGFAP15692 232 aaPredicted RBP19.64■□□□□ 0.73
ECHDC2-223ENST00000542552 PTPRCP08575 1304 aa19.64■□□□□ 0.73
ECHDC2-223ENST00000542552 ZNF541Q9H0D2 1346 aa19.64■□□□□ 0.73
ECHDC2-223ENST00000542552 CEP350Q5VT06 3117 aa19.64■□□□□ 0.73
ECHDC2-223ENST00000542552 ALDH1L1O75891 902 aa19.63■□□□□ 0.73
ECHDC2-223ENST00000542552 CSF1RP07333 972 aa19.63■□□□□ 0.73
ECHDC2-223ENST00000542552 LARGE2Q8N3Y3 721 aa19.63■□□□□ 0.73
ECHDC2-223ENST00000542552 JDP2Q8WYK2 163 aa19.63■□□□□ 0.73
ECHDC2-223ENST00000542552 CCDC85AQ96PX6 553 aaPredicted RBP19.63■□□□□ 0.73
ECHDC2-223ENST00000542552 L3MBTL3Q96JM7 780 aaPredicted RBP19.62■□□□□ 0.73
ECHDC2-223ENST00000542552 GREM2Q9H772 168 aa19.62■□□□□ 0.73
ECHDC2-223ENST00000542552 PPIP5K2O43314 1243 aa19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 GPSM2P81274 684 aa19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 HNRNPUQ00839 825 aaKnown RBP eCLIP19.61■□□□□ 0.738e-9■□□□□ 9.2
ECHDC2-223ENST00000542552 KIAA2012Q0VF49 1180 aa19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 AOC3Q16853 763 aa19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 SLC4A10Q6U841 1118 aa19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 RBM46Q8TBY0 533 aaKnown RBP19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 BCL2L13Q9BXK5 485 aa19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 SRCIN1Q9C0H9 1055 aa19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 PODXL2Q9NZ53 605 aa19.61■□□□□ 0.73
ECHDC2-223ENST00000542552 SCN4AP35499 1836 aa19.6■□□□□ 0.73
ECHDC2-223ENST00000542552 GRM8O00222 908 aa19.6■□□□□ 0.73
ECHDC2-223ENST00000542552 FOXO4P98177 505 aa19.6■□□□□ 0.73
ECHDC2-223ENST00000542552 ANKRD18AQ8IVF6 992 aa19.6■□□□□ 0.73
ECHDC2-223ENST00000542552 CDC5LQ99459 802 aaKnown RBP19.6■□□□□ 0.73
ECHDC2-223ENST00000542552 SMC4Q9NTJ3 1288 aa19.6■□□□□ 0.73
ECHDC2-223ENST00000542552 NSFL1CQ9UNZ2 370 aaKnown RBP19.6■□□□□ 0.73
ECHDC2-223ENST00000542552 C16orf71Q8IYS4 520 aaPredicted RBP19.59■□□□□ 0.73
ECHDC2-223ENST00000542552 GPC2Q8N158 579 aa19.59■□□□□ 0.73
ECHDC2-223ENST00000542552 POLLQ9UGP5 575 aa19.59■□□□□ 0.73
ECHDC2-223ENST00000542552 UTYO14607 1347 aa19.58■□□□□ 0.73
ECHDC2-223ENST00000542552 RARSP54136 660 aaKnown RBP19.58■□□□□ 0.72
ECHDC2-223ENST00000542552 NIM1KQ8IY84 436 aa19.58■□□□□ 0.72
ECHDC2-223ENST00000542552 TBC1D16Q8TBP0 767 aa19.58■□□□□ 0.72
ECHDC2-223ENST00000542552 BSDC1Q9NW68 430 aaPredicted RBP19.58■□□□□ 0.72
ECHDC2-223ENST00000542552 ZNRF3Q9ULT6 936 aa19.58■□□□□ 0.72
ECHDC2-223ENST00000542552 SPEF2Q9C093 1822 aa19.58■□□□□ 0.72
ECHDC2-223ENST00000542552 EIF6P56537 245 aaKnown RBP19.57■□□□□ 0.72
ECHDC2-223ENST00000542552 C9orf78Q9NZ63 289 aaPredicted RBP19.57■□□□□ 0.72
ECHDC2-223ENST00000542552 ITGA6P23229 1130 aa19.56■□□□□ 0.72
ECHDC2-223ENST00000542552 FSTL1Q12841 308 aa19.56■□□□□ 0.72
ECHDC2-223ENST00000542552 FAM161AQ3B820 660 aa19.56■□□□□ 0.72
ECHDC2-223ENST00000542552 EPHA10Q5JZY3 1008 aa19.56■□□□□ 0.72
ECHDC2-223ENST00000542552 IQCA1LA6NCM1 817 aa19.55■□□□□ 0.72
ECHDC2-223ENST00000542552 C6orf229H3BNL8 230 aa19.55■□□□□ 0.72
ECHDC2-223ENST00000542552 WASHC4Q2M389 1173 aa19.55■□□□□ 0.72
ECHDC2-223ENST00000542552 KAZALD1Q96I82 304 aa19.55■□□□□ 0.72
ECHDC2-223ENST00000542552 MINPP1Q9UNW1 487 aa19.55■□□□□ 0.72
ECHDC2-223ENST00000542552 ZBED9Q6R2W3 1325 aa19.54■□□□□ 0.72
ECHDC2-223ENST00000542552 NBPF7P0C2Y1 421 aaPredicted RBP19.54■□□□□ 0.72
ECHDC2-223ENST00000542552 HSPA6P17066 643 aa19.54■□□□□ 0.72
ECHDC2-223ENST00000542552 CXCL9Q07325 125 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms