RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 POTEAQ6S8J7 498 aa11.52□□□□□ -0.57
LDHA-220ENST00000542179 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
LDHA-220ENST00000542179 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.57
LDHA-220ENST00000542179 SSH3Q8TE77 659 aa11.52□□□□□ -0.57
LDHA-220ENST00000542179 MARVELD3Q96A59 401 aa11.52□□□□□ -0.57
LDHA-220ENST00000542179 ZBTB3Q9H5J0 574 aa11.52□□□□□ -0.57
LDHA-220ENST00000542179 CCNL1Q9UK58 526 aaPredicted RBP11.52□□□□□ -0.57
LDHA-220ENST00000542179 PDZRN3Q9UPQ7 1066 aa11.52□□□□□ -0.57
LDHA-220ENST00000542179 MYH14Q7Z406 1995 aaKnown RBP11.52□□□□□ -0.57
LDHA-220ENST00000542179 RIMBP2O15034 1052 aa11.51□□□□□ -0.57
LDHA-220ENST00000542179 CASP7P55210 303 aa11.51□□□□□ -0.57
LDHA-220ENST00000542179 NUCB1Q02818 461 aa11.51□□□□□ -0.57
LDHA-220ENST00000542179 SLC27A3Q5K4L6 730 aa11.51□□□□□ -0.57
LDHA-220ENST00000542179 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
LDHA-220ENST00000542179 CWC25Q9NXE8 425 aaPredicted RBP11.51□□□□□ -0.57
LDHA-220ENST00000542179 AFDNP55196 1824 aaKnown RBP11.51□□□□□ -0.57
LDHA-220ENST00000542179 ATP5J2-PTCD1G3V325 749 aa11.5□□□□□ -0.57
LDHA-220ENST00000542179 RPS6KA4O75676 772 aa11.5□□□□□ -0.57
LDHA-220ENST00000542179 TRIM37O94972 964 aa11.5□□□□□ -0.57
LDHA-220ENST00000542179 EMP3P54852 163 aa11.5□□□□□ -0.57
LDHA-220ENST00000542179 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
LDHA-220ENST00000542179 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
LDHA-220ENST00000542179 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
LDHA-220ENST00000542179 TAF1LQ8IZX4 1826 aa11.5□□□□□ -0.57
LDHA-220ENST00000542179 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
LDHA-220ENST00000542179 PNMA6EA0A0J9YXQ4 647 aa11.49□□□□□ -0.57
LDHA-220ENST00000542179 PLSCR1O15162 318 aa11.49□□□□□ -0.57
LDHA-220ENST00000542179 HOXB3P14651 431 aaPredicted RBP11.49□□□□□ -0.57
LDHA-220ENST00000542179 HLFQ16534 295 aa11.49□□□□□ -0.57
LDHA-220ENST00000542179 TMEM92Q6UXU6 159 aa11.49□□□□□ -0.57
LDHA-220ENST00000542179 CHD1LQ86WJ1 897 aa11.49□□□□□ -0.57
LDHA-220ENST00000542179 ZNF34Q8IZ26 560 aa11.49□□□□□ -0.57
LDHA-220ENST00000542179 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
LDHA-220ENST00000542179 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
LDHA-220ENST00000542179 CAMTA2O94983 1202 aa11.48□□□□□ -0.57
LDHA-220ENST00000542179 RABL6Q3YEC7 729 aaPredicted RBP11.48□□□□□ -0.57
LDHA-220ENST00000542179 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
LDHA-220ENST00000542179 NUP98P52948 1817 aa11.48□□□□□ -0.57
LDHA-220ENST00000542179 C4BP0C0L5 1744 aa11.47□□□□□ -0.57
LDHA-220ENST00000542179 SRGAP3O43295 1099 aa11.47□□□□□ -0.57
LDHA-220ENST00000542179 PCCAP05165 728 aaPredicted RBP11.47□□□□□ -0.57
LDHA-220ENST00000542179 KCNQ4P56696 695 aa11.47□□□□□ -0.57
LDHA-220ENST00000542179 ANKRD45Q5TZF3 282 aa11.47□□□□□ -0.57
LDHA-220ENST00000542179 UBE3BQ7Z3V4 1068 aa11.47□□□□□ -0.57
LDHA-220ENST00000542179 NLRP10Q86W26 655 aa11.47□□□□□ -0.57
LDHA-220ENST00000542179 ZBTB38Q8NAP3 1195 aaPredicted RBP11.47□□□□□ -0.57
LDHA-220ENST00000542179 ARXQ96QS3 562 aa11.47□□□□□ -0.57
LDHA-220ENST00000542179 PLA2G12BQ9BX93 195 aa11.47□□□□□ -0.57
LDHA-220ENST00000542179 BICC1Q9H694 974 aaKnown RBP11.47□□□□□ -0.57
LDHA-220ENST00000542179 LRRC4BQ9NT99 713 aa11.47□□□□□ -0.57
LDHA-220ENST00000542179 NOP58Q9Y2X3 529 aaKnown RBP11.47□□□□□ -0.57
LDHA-220ENST00000542179 CDHR2Q9BYE9 1310 aa11.46□□□□□ -0.57
LDHA-220ENST00000542179 RAB11FIP3O75154 756 aa11.46□□□□□ -0.57
LDHA-220ENST00000542179 PARP10Q53GL7 1025 aa11.46□□□□□ -0.57
LDHA-220ENST00000542179 HSP90AB4PQ58FF6 505 aa11.46□□□□□ -0.57
LDHA-220ENST00000542179 SKAP1Q86WV1 359 aa11.46□□□□□ -0.57
LDHA-220ENST00000542179 NARFQ9UHQ1 456 aa11.46□□□□□ -0.57
LDHA-220ENST00000542179 ZNF652Q9Y2D9 606 aa11.46□□□□□ -0.57
LDHA-220ENST00000542179 RTCBQ9Y3I0 505 aaKnown RBP11.46□□□□□ -0.57
LDHA-220ENST00000542179 BCORQ6W2J9 1755 aa11.46□□□□□ -0.58
LDHA-220ENST00000542179 GNPATO15228 680 aa11.45□□□□□ -0.58
LDHA-220ENST00000542179 PDE4AP27815 886 aa11.45□□□□□ -0.58
LDHA-220ENST00000542179 RGS3P49796 1198 aa11.45□□□□□ -0.58
LDHA-220ENST00000542179 FOXO4P98177 505 aa11.45□□□□□ -0.58
LDHA-220ENST00000542179 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
LDHA-220ENST00000542179 EPHA10Q5JZY3 1008 aa11.45□□□□□ -0.58
LDHA-220ENST00000542179 UPF1Q92900 1129 aaKnown RBP eCLIP11.45□□□□□ -0.58
LDHA-220ENST00000542179 RGPD3A6NKT7 1758 aaPredicted RBP11.45□□□□□ -0.58
LDHA-220ENST00000542179 RGPD4Q7Z3J3 1758 aa11.45□□□□□ -0.58
LDHA-220ENST00000542179 SURF6O75683 361 aaKnown RBP11.44□□□□□ -0.58
LDHA-220ENST00000542179 AK7Q96M32 723 aa11.44□□□□□ -0.58
LDHA-220ENST00000542179 LRRCC1Q9C099 1032 aa11.44□□□□□ -0.58
LDHA-220ENST00000542179 LNPKQ9C0E8 428 aa11.44□□□□□ -0.58
LDHA-220ENST00000542179 COPRSQ9NQ92 184 aa11.44□□□□□ -0.58
LDHA-220ENST00000542179 SCN7AQ01118 1682 aa11.43□□□□□ -0.58
LDHA-220ENST00000542179 UBN2Q6ZU65 1347 aa11.43□□□□□ -0.58
LDHA-220ENST00000542179 APBA3O96018 575 aa11.43□□□□□ -0.58
LDHA-220ENST00000542179 CSF1RP07333 972 aa11.43□□□□□ -0.58
LDHA-220ENST00000542179 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
LDHA-220ENST00000542179 GPTP24298 496 aa11.43□□□□□ -0.58
LDHA-220ENST00000542179 RFX5P48382 616 aaPredicted RBP11.43□□□□□ -0.58
LDHA-220ENST00000542179 TRAPPC3LQ5T215 181 aa11.43□□□□□ -0.58
LDHA-220ENST00000542179 JARID2Q92833 1246 aaPredicted RBP11.43□□□□□ -0.58
LDHA-220ENST00000542179 ARHGEF1Q92888 912 aaKnown RBP11.43□□□□□ -0.58
LDHA-220ENST00000542179 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
LDHA-220ENST00000542179 EXOC6BQ9Y2D4 811 aa11.43□□□□□ -0.58
LDHA-220ENST00000542179 TNS1Q9HBL0 1735 aaKnown RBP11.43□□□□□ -0.58
LDHA-220ENST00000542179 ZPR1O75312 459 aa11.42□□□□□ -0.58
LDHA-220ENST00000542179 HSP90B1P14625 803 aaKnown RBP11.42□□□□□ -0.58
LDHA-220ENST00000542179 SSFA2P28290 1259 aa11.42□□□□□ -0.58
LDHA-220ENST00000542179 SUSD4Q5VX71 490 aa11.42□□□□□ -0.58
LDHA-220ENST00000542179 LMBR1LQ6UX01 489 aa11.42□□□□□ -0.58
LDHA-220ENST00000542179 ERC1Q8IUD2 1116 aa11.42□□□□□ -0.58
LDHA-220ENST00000542179 KIF1BPQ96EK5 621 aa11.42□□□□□ -0.58
LDHA-220ENST00000542179 FAM89AQ96GI7 184 aa11.42□□□□□ -0.58
LDHA-220ENST00000542179 UTP14AQ9BVJ6 771 aaKnown RBP11.42□□□□□ -0.58
LDHA-220ENST00000542179 BCL2L12Q9HB09 334 aa11.42□□□□□ -0.58
LDHA-220ENST00000542179 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
LDHA-220ENST00000542179 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
LDHA-220ENST00000542179 SH3TC1Q8TE82 1336 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms