RNA–Protein interactions for RNA: ENST00000542129.5

DDX11-218, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-218ENST00000542129 TTLL11Q8NHH1 800 aa20.71■□□□□ 0.91
DDX11-218ENST00000542129 LRRCC1Q9C099 1032 aa20.71■□□□□ 0.91
DDX11-218ENST00000542129 NYXQ9GZU5 481 aa20.71■□□□□ 0.91
DDX11-218ENST00000542129 CARMIL3Q8ND23 1372 aa20.7■□□□□ 0.9
DDX11-218ENST00000542129 ABCC12Q96J65 1359 aa20.7■□□□□ 0.9
DDX11-218ENST00000542129 RAB11FIP3O75154 756 aa20.7■□□□□ 0.9
DDX11-218ENST00000542129 HSP90AB4PQ58FF6 505 aa20.7■□□□□ 0.9
DDX11-218ENST00000542129 COPRSQ9NQ92 184 aa20.7■□□□□ 0.9
DDX11-218ENST00000542129 GTF2E1P29083 439 aaPredicted RBP20.69■□□□□ 0.9
DDX11-218ENST00000542129 G3BP1Q13283 466 aaKnown RBP eCLIP20.68■□□□□ 0.9
DDX11-218ENST00000542129 C16orf71Q8IYS4 520 aaPredicted RBP20.68■□□□□ 0.9
DDX11-218ENST00000542129 CCDC24Q8N4L8 307 aa20.68■□□□□ 0.9
DDX11-218ENST00000542129 RHPN1Q8TCX5 695 aa20.68■□□□□ 0.9
DDX11-218ENST00000542129 ZNF594Q96JF6 807 aaPredicted RBP20.68■□□□□ 0.9
DDX11-218ENST00000542129 GREM2Q9H772 168 aa20.68■□□□□ 0.9
DDX11-218ENST00000542129 IL1RAPL2Q9NP60 686 aa20.68■□□□□ 0.9
DDX11-218ENST00000542129 TM4SF1P30408 202 aa20.68■□□□□ 0.9
DDX11-218ENST00000542129 CCDC57Q2TAC2 916 aa20.68■□□□□ 0.9
DDX11-218ENST00000542129 KIF1BPQ96EK5 621 aa20.68■□□□□ 0.9
DDX11-218ENST00000542129 TPTE2Q6XPS3 522 aa20.67■□□□□ 0.9
DDX11-218ENST00000542129 OTUD7AQ8TE49 926 aaPredicted RBP20.67■□□□□ 0.9
DDX11-218ENST00000542129 NPHP1O15259 732 aa20.66■□□□□ 0.9
DDX11-218ENST00000542129 HSP90B1P14625 803 aaKnown RBP20.66■□□□□ 0.9
DDX11-218ENST00000542129 ITGA6P23229 1130 aa20.66■□□□□ 0.9
DDX11-218ENST00000542129 DDR1Q08345 913 aa20.66■□□□□ 0.9
DDX11-218ENST00000542129 IFIT5Q13325 482 aaKnown RBP20.66■□□□□ 0.9
DDX11-218ENST00000542129 C3orf67Q6ZVT6 689 aa20.66■□□□□ 0.9
DDX11-218ENST00000542129 TNRC6CQ9HCJ0 1690 aaKnown RBP20.66■□□□□ 0.9
DDX11-218ENST00000542129 SASH1O94885 1247 aa20.65■□□□□ 0.9
DDX11-218ENST00000542129 ERC1Q8IUD2 1116 aa20.65■□□□□ 0.9
DDX11-218ENST00000542129 ANKRD18BA2A2Z9 1011 aa20.64■□□□□ 0.9
DDX11-218ENST00000542129 SERPINB2P05120 415 aa20.64■□□□□ 0.9
DDX11-218ENST00000542129 TAF7LQ5H9L4 462 aa20.64■□□□□ 0.9
DDX11-218ENST00000542129 SLC10A5Q5PT55 438 aa20.64■□□□□ 0.9
DDX11-218ENST00000542129 MSL1Q68DK7 614 aa20.64■□□□□ 0.9
DDX11-218ENST00000542129 CNBD1Q8NA66 436 aa20.64■□□□□ 0.9
DDX11-218ENST00000542129 SPEF2Q9C093 1822 aa20.64■□□□□ 0.9
DDX11-218ENST00000542129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.64■□□□□ 0.9
DDX11-218ENST00000542129 POLRMTO00411 1230 aaKnown RBP20.63■□□□□ 0.89
DDX11-218ENST00000542129 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
DDX11-218ENST00000542129 LRRC24Q50LG9 513 aa20.63■□□□□ 0.89
DDX11-218ENST00000542129 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
DDX11-218ENST00000542129 UPF1Q92900 1129 aaKnown RBP eCLIP20.63■□□□□ 0.89
DDX11-218ENST00000542129 PUS3Q9BZE2 481 aaKnown RBP20.63■□□□□ 0.89
DDX11-218ENST00000542129 PRR5LQ6MZQ0 368 aa20.63■□□□□ 0.89
DDX11-218ENST00000542129 PLEKHM2Q8IWE5 1019 aa20.63■□□□□ 0.89
DDX11-218ENST00000542129 SEC31BQ9NQW1 1179 aa20.63■□□□□ 0.89
DDX11-218ENST00000542129 TAF1P21675 1872 aa20.63■□□□□ 0.89
DDX11-218ENST00000542129 EYA2O00167 538 aa20.62■□□□□ 0.89
DDX11-218ENST00000542129 ATG9AQ7Z3C6 839 aa20.62■□□□□ 0.89
DDX11-218ENST00000542129 COL4A1P02462 1669 aa20.61■□□□□ 0.89
DDX11-218ENST00000542129 LRP5O75197 1615 aa20.61■□□□□ 0.89
DDX11-218ENST00000542129 SF3B3Q15393 1217 aaKnown RBP20.61■□□□□ 0.89
DDX11-218ENST00000542129 RTL9Q8NET4 1388 aa20.61■□□□□ 0.89
DDX11-218ENST00000542129 TFCP2Q12800 502 aa20.6■□□□□ 0.89
DDX11-218ENST00000542129 NLRP3Q96P20 1036 aa20.6■□□□□ 0.89
DDX11-218ENST00000542129 PDGFDQ9GZP0 370 aaPredicted RBP20.6■□□□□ 0.89
DDX11-218ENST00000542129 NRXN2Q9P2S2 1712 aa20.6■□□□□ 0.89
DDX11-218ENST00000542129 SALL3Q9BXA9 1300 aa20.6■□□□□ 0.89
DDX11-218ENST00000542129 CIAO1O76071 339 aa20.59■□□□□ 0.89
DDX11-218ENST00000542129 MMP10P09238 476 aa20.59■□□□□ 0.89
DDX11-218ENST00000542129 CLASRPQ8N2M8 674 aaKnown RBP20.59■□□□□ 0.89
DDX11-218ENST00000542129 IL15P40933 162 aaPredicted RBP20.59■□□□□ 0.89
DDX11-218ENST00000542129 ST5P78524 1137 aa20.59■□□□□ 0.89
DDX11-218ENST00000542129 TSHZ3Q63HK5 1081 aa20.58■□□□□ 0.88
DDX11-218ENST00000542129 LDHAL6AQ6ZMR3 332 aa20.58■□□□□ 0.88
DDX11-218ENST00000542129 AACSQ86V21 672 aa20.58■□□□□ 0.88
DDX11-218ENST00000542129 ANKRD31Q8N7Z5 1873 aa20.57■□□□□ 0.88
DDX11-218ENST00000542129 RIC1Q4ADV7 1423 aa20.57■□□□□ 0.88
DDX11-218ENST00000542129 MX1P20591 662 aa20.57■□□□□ 0.88
DDX11-218ENST00000542129 PDE1AP54750 535 aa20.57■□□□□ 0.88
DDX11-218ENST00000542129 CNNM1Q9NRU3 951 aa20.57■□□□□ 0.88
DDX11-218ENST00000542129 FBXO3Q9UK99 471 aa20.57■□□□□ 0.88
DDX11-218ENST00000542129 PARP3Q9Y6F1 533 aa20.57■□□□□ 0.88
DDX11-218ENST00000542129 EAF2Q96CJ1 260 aaPredicted RBP20.56■□□□□ 0.88
DDX11-218ENST00000542129 RIPOR2Q9Y4F9 1068 aa20.56■□□□□ 0.88
DDX11-218ENST00000542129 TNNI3KQ59H18 835 aa20.55■□□□□ 0.88
DDX11-218ENST00000542129 CCDC8Q9H0W5 538 aaPredicted RBP20.55■□□□□ 0.88
DDX11-218ENST00000542129 FPGT-TNNI3KV9GXZ4 949 aa20.55■□□□□ 0.88
DDX11-218ENST00000542129 IFIT2P09913 472 aaKnown RBP20.55■□□□□ 0.88
DDX11-218ENST00000542129 IGHMBP2P38935 993 aaKnown RBP20.55■□□□□ 0.88
DDX11-218ENST00000542129 CDC5LQ99459 802 aaKnown RBP20.55■□□□□ 0.88
DDX11-218ENST00000542129 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
DDX11-218ENST00000542129 TLR7Q9NYK1 1049 aaKnown RBP20.55■□□□□ 0.88
DDX11-218ENST00000542129 METTL24Q5JXM2 366 aa20.54■□□□□ 0.88
DDX11-218ENST00000542129 TTC22Q5TAA0 569 aa20.54■□□□□ 0.88
DDX11-218ENST00000542129 OSBPL3Q9H4L5 887 aa20.54■□□□□ 0.88
DDX11-218ENST00000542129 CEP126Q9P2H0 1117 aa20.54■□□□□ 0.88
DDX11-218ENST00000542129 ZNF609O15014 1411 aa20.53■□□□□ 0.88
DDX11-218ENST00000542129 GSPT1P15170 499 aaKnown RBP20.53■□□□□ 0.88
DDX11-218ENST00000542129 ANKRD18AQ8IVF6 992 aa20.53■□□□□ 0.88
DDX11-218ENST00000542129 CELF1Q92879 486 aaKnown RBP20.53■□□□□ 0.88
DDX11-218ENST00000542129 STAP2Q9UGK3 403 aa20.53■□□□□ 0.88
DDX11-218ENST00000542129 A0A1B0GUL6 1792 aa20.52■□□□□ 0.88
DDX11-218ENST00000542129 BMP2KLQ5H9B9 411 aa20.51■□□□□ 0.87
DDX11-218ENST00000542129 DDX46Q7L014 1031 aaKnown RBP20.51■□□□□ 0.87
DDX11-218ENST00000542129 GPR108Q9NPR9 543 aa20.51■□□□□ 0.87
DDX11-218ENST00000542129 DBNLQ9UJU6 430 aaKnown RBP20.51■□□□□ 0.87
DDX11-218ENST00000542129 AOX1Q06278 1338 aa20.5■□□□□ 0.87
DDX11-218ENST00000542129 C8orf34Q49A92 452 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms