RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 ZBTB38Q8NAP3 1195 aaPredicted RBP16.42■□□□□ 0.22
AP000439.2-201ENST00000542064 GRAPLQ8TC17 118 aaPredicted RBP16.42■□□□□ 0.22
AP000439.2-201ENST00000542064 STK31Q9BXU1 1019 aa16.42■□□□□ 0.22
AP000439.2-201ENST00000542064 CWC25Q9NXE8 425 aaPredicted RBP16.42■□□□□ 0.22
AP000439.2-201ENST00000542064 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
AP000439.2-201ENST00000542064 PCCAP05165 728 aaPredicted RBP16.41■□□□□ 0.22
AP000439.2-201ENST00000542064 CASP7P55210 303 aa16.41■□□□□ 0.22
AP000439.2-201ENST00000542064 SF3B3Q15393 1217 aaKnown RBP16.41■□□□□ 0.22
AP000439.2-201ENST00000542064 AOC3Q16853 763 aa16.41■□□□□ 0.22
AP000439.2-201ENST00000542064 KDM2BQ8NHM5 1336 aa16.41■□□□□ 0.22
AP000439.2-201ENST00000542064 ZC3H4Q9UPT8 1303 aaKnown RBP16.41■□□□□ 0.22
AP000439.2-201ENST00000542064 ZNF646O15015 1829 aaPredicted RBP16.4■□□□□ 0.22
AP000439.2-201ENST00000542064 CCER2I3L3R5 266 aa16.4■□□□□ 0.22
AP000439.2-201ENST00000542064 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
AP000439.2-201ENST00000542064 SOGA3Q5TF21 947 aa16.4■□□□□ 0.22
AP000439.2-201ENST00000542064 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
AP000439.2-201ENST00000542064 CCDC191Q8NCU4 936 aa16.4■□□□□ 0.22
AP000439.2-201ENST00000542064 PSMD1Q99460 953 aa16.4■□□□□ 0.22
AP000439.2-201ENST00000542064 BCL2L13Q9BXK5 485 aa16.4■□□□□ 0.22
AP000439.2-201ENST00000542064 SLFN5Q08AF3 891 aa16.39■□□□□ 0.21
AP000439.2-201ENST00000542064 DDX46Q7L014 1031 aaKnown RBP16.39■□□□□ 0.21
AP000439.2-201ENST00000542064 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
AP000439.2-201ENST00000542064 SCN4AP35499 1836 aa16.38■□□□□ 0.21
AP000439.2-201ENST00000542064 FZD9O00144 591 aa16.38■□□□□ 0.21
AP000439.2-201ENST00000542064 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
AP000439.2-201ENST00000542064 GPSM2P81274 684 aa16.38■□□□□ 0.21
AP000439.2-201ENST00000542064 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
AP000439.2-201ENST00000542064 DNAAF4Q8WXU2 420 aa16.38■□□□□ 0.21
AP000439.2-201ENST00000542064 MYH16Q9H6N6 1097 aa16.38■□□□□ 0.21
AP000439.2-201ENST00000542064 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
AP000439.2-201ENST00000542064 YDJCA8MPS7 323 aa16.37■□□□□ 0.21
AP000439.2-201ENST00000542064 TOMM70O94826 608 aa16.37■□□□□ 0.21
AP000439.2-201ENST00000542064 SP8Q8IXZ3 490 aa16.37■□□□□ 0.21
AP000439.2-201ENST00000542064 GREM2Q9H772 168 aa16.37■□□□□ 0.21
AP000439.2-201ENST00000542064 H7C1W4 665 aa16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 HSPA6P17066 643 aa16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 GCKRQ14397 625 aa16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 EPHA10Q5JZY3 1008 aa16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 BEND3Q5T5X7 828 aa16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 MRPL50Q8N5N7 158 aaKnown RBP16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 CDHR2Q9BYE9 1310 aa16.36■□□□□ 0.21
AP000439.2-201ENST00000542064 PDE8AO60658 829 aa16.35■□□□□ 0.21
AP000439.2-201ENST00000542064 CTSWP56202 376 aa16.35■□□□□ 0.21
AP000439.2-201ENST00000542064 LARGE2Q8N3Y3 721 aa16.35■□□□□ 0.21
AP000439.2-201ENST00000542064 TTLL11Q8NHH1 800 aa16.35■□□□□ 0.21
AP000439.2-201ENST00000542064 RBM46Q8TBY0 533 aaKnown RBP16.35■□□□□ 0.21
AP000439.2-201ENST00000542064 SSH1Q8WYL5 1049 aa16.35■□□□□ 0.21
AP000439.2-201ENST00000542064 RTFDC1Q9BY42 306 aaPredicted RBP16.35■□□□□ 0.21
AP000439.2-201ENST00000542064 KCNQ5Q9NR82 932 aa16.35■□□□□ 0.21
AP000439.2-201ENST00000542064 BBOX1O75936 387 aa16.34■□□□□ 0.21
AP000439.2-201ENST00000542064 VEGFAP15692 232 aaPredicted RBP16.34■□□□□ 0.21
AP000439.2-201ENST00000542064 FAM161AQ3B820 660 aa16.34■□□□□ 0.21
AP000439.2-201ENST00000542064 CC2D2BQ6DHV5 1058 aa16.34■□□□□ 0.21
AP000439.2-201ENST00000542064 DPP8Q6V1X1 898 aaPredicted RBP16.34■□□□□ 0.21
AP000439.2-201ENST00000542064 MPNDQ8N594 471 aa16.34■□□□□ 0.21
AP000439.2-201ENST00000542064 GJA3Q9Y6H8 435 aa16.34■□□□□ 0.21
AP000439.2-201ENST00000542064 RIMBP2O15034 1052 aa16.33■□□□□ 0.2
AP000439.2-201ENST00000542064 SCNN1DP51172 638 aa16.33■□□□□ 0.2
AP000439.2-201ENST00000542064 L3MBTL3Q96JM7 780 aaPredicted RBP16.33■□□□□ 0.2
AP000439.2-201ENST00000542064 E9PSI1 815 aa16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 RPS8P62241 208 aaKnown RBP16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 FMR1Q06787 632 aaKnown RBP eCLIP16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 KIAA2012Q0VF49 1180 aa16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 PSME4Q14997 1843 aa16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 IFFO2Q5TF58 517 aa16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 TAF1DQ9H5J8 278 aaPredicted RBP16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 DBNDD1Q9H9R9 158 aa16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 NSFL1CQ9UNZ2 370 aaKnown RBP16.32■□□□□ 0.2
AP000439.2-201ENST00000542064 RTL9Q8NET4 1388 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 SNAP23O00161 211 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 RAD17O75943 681 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 KLRK1P26718 216 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 EPS15P42566 896 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 FOXO4P98177 505 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 CXCL9Q07325 125 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 DOK7Q18PE1 504 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 KAZALD1Q96I82 304 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 TNNQ9UQP3 1299 aa16.31■□□□□ 0.2
AP000439.2-201ENST00000542064 CCDC152Q4G0S7 254 aa16.3■□□□□ 0.2
AP000439.2-201ENST00000542064 NIM1KQ8IY84 436 aa16.3■□□□□ 0.2
AP000439.2-201ENST00000542064 TBC1D16Q8TBP0 767 aa16.3■□□□□ 0.2
AP000439.2-201ENST00000542064 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
AP000439.2-201ENST00000542064 SUCLG2Q96I99 432 aa16.29■□□□□ 0.2
AP000439.2-201ENST00000542064 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
AP000439.2-201ENST00000542064 UFL1O94874 794 aa16.28■□□□□ 0.2
AP000439.2-201ENST00000542064 EAPPQ56P03 285 aaPredicted RBP16.28■□□□□ 0.2
AP000439.2-201ENST00000542064 GPC2Q8N158 579 aa16.28■□□□□ 0.2
AP000439.2-201ENST00000542064 ZNF594Q96JF6 807 aaPredicted RBP16.28■□□□□ 0.2
AP000439.2-201ENST00000542064 PLA2G12BQ9BX93 195 aa16.28■□□□□ 0.2
AP000439.2-201ENST00000542064 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
AP000439.2-201ENST00000542064 EGFRP00533 1210 aa16.27■□□□□ 0.2
AP000439.2-201ENST00000542064 NBPF7P0C2Y1 421 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms