RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 L3MBTL2Q969R5 705 aa7.98□□□□□ -1.13
CPSF7-220ENST00000541963 NGLY1Q96IV0 654 aa7.98□□□□□ -1.13
CPSF7-220ENST00000541963 INSM2Q96T92 566 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-220ENST00000541963 IQSEC3Q9UPP2 1182 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-220ENST00000541963 DNMT3AQ9Y6K1 912 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-220ENST00000541963 ABCC3O15438 1527 aa7.98□□□□□ -1.13
CPSF7-220ENST00000541963 SPINT1O43278 529 aa7.97□□□□□ -1.13
CPSF7-220ENST00000541963 AAMPQ13685 434 aa7.97□□□□□ -1.13
CPSF7-220ENST00000541963 CAPN12Q6ZSI9 719 aa7.97□□□□□ -1.13
CPSF7-220ENST00000541963 HCN4Q9Y3Q4 1203 aa7.97□□□□□ -1.13
CPSF7-220ENST00000541963 A2ML1A8K2U0 1454 aa7.97□□□□□ -1.13
CPSF7-220ENST00000541963 NLRP1Q9C000 1473 aa7.97□□□□□ -1.13
CPSF7-220ENST00000541963 PTPRTO14522 1441 aa7.96□□□□□ -1.13
CPSF7-220ENST00000541963 ARHGAP31Q2M1Z3 1444 aa7.96□□□□□ -1.13
CPSF7-220ENST00000541963 RRBP1Q9P2E9 1410 aaKnown RBP7.96□□□□□ -1.13
CPSF7-220ENST00000541963 NBPF1Q3BBV0 1214 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 PKDCCQ504Y2 493 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 C6orf118Q5T5N4 469 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 ALKBH2Q6NS38 261 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 ANKLE2Q86XL3 938 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 RGS22Q8NE09 1264 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 AIDAQ96BJ3 306 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 GRIP2Q9C0E4 1043 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 CEP170BQ9Y4F5 1589 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-220ENST00000541963 CAMSAP1Q5T5Y3 1602 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 MYO3AQ8NEV4 1616 aa7.96□□□□□ -1.14
CPSF7-220ENST00000541963 PRDM15P57071 1507 aaPredicted RBP7.95□□□□□ -1.14
CPSF7-220ENST00000541963 EML1O00423 815 aa7.95□□□□□ -1.14
CPSF7-220ENST00000541963 DGAT1O75907 488 aa7.95□□□□□ -1.14
CPSF7-220ENST00000541963 BRD2P25440 801 aaKnown RBP7.95□□□□□ -1.14
CPSF7-220ENST00000541963 HIRAP54198 1017 aaPredicted RBP7.95□□□□□ -1.14
CPSF7-220ENST00000541963 MRPL14Q6P1L8 145 aaKnown RBP7.95□□□□□ -1.14
CPSF7-220ENST00000541963 STIM2Q9P246 746 aa7.95□□□□□ -1.14
CPSF7-220ENST00000541963 PARP3Q9Y6F1 533 aa7.95□□□□□ -1.14
CPSF7-220ENST00000541963 USP3Q9Y6I4 520 aa7.95□□□□□ -1.14
CPSF7-220ENST00000541963 DEPDC5O75140 1603 aa7.95□□□□□ -1.14
CPSF7-220ENST00000541963 CFAP65Q6ZU64 1925 aaKnown RBP7.95□□□□□ -1.14
CPSF7-220ENST00000541963 CEP152O94986 1710 aa7.95□□□□□ -1.14
CPSF7-220ENST00000541963 PLA2R1Q13018 1463 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 MROH1Q8NDA8 1641 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 TATP17735 454 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-220ENST00000541963 PLA2G4AP47712 749 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 MTMR3Q13615 1198 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 HIF1AQ16665 826 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 CTC1Q2NKJ3 1217 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 C1orf53Q5VUE5 145 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 ZSCAN29Q8IWY8 852 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-220ENST00000541963 ALDH16A1Q8IZ83 802 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 ABTB2Q8N961 1025 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 NEUROD4Q9HD90 331 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 SLC52A1Q9NWF4 448 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 ZNF142P52746 1687 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-220ENST00000541963 STRCQ7RTU9 1775 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 ERVK-7P63135 1459 aa7.94□□□□□ -1.14
CPSF7-220ENST00000541963 LMTK2Q8IWU2 1503 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 SPATA31D1Q6ZQQ2 1576 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 GFRA3O60609 400 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 MAPK1P28482 360 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 RTN1Q16799 776 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 C11orf91Q3C1V1 193 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 NOM1Q5C9Z4 860 aaKnown RBP7.93□□□□□ -1.14
CPSF7-220ENST00000541963 COX20Q5RI15 118 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 LYSMD3Q7Z3D4 306 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 MYO19Q96H55 970 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 PHACTR1Q9C0D0 580 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 SAP130Q9H0E3 1048 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 EID1Q9Y6B2 187 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 NUP155O75694 1391 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 UGGT1Q9NYU2 1555 aa7.93□□□□□ -1.14
CPSF7-220ENST00000541963 AXIN1O15169 862 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 NDUFB5O43674 189 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 AVPP01185 164 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 CTSOP43234 321 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-220ENST00000541963 C4orf17Q53FE4 359 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 PRICKLE2Q7Z3G6 844 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 FBXO41Q8TF61 875 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 ZDHHC1Q8WTX9 485 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 DCTN4Q9UJW0 460 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 BRPF3Q9ULD4 1205 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 VWDEQ8N2E2 1590 aa7.92□□□□□ -1.14
CPSF7-220ENST00000541963 TTLL8A6PVC2 850 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 SPATA31C2B4DYI2 1134 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 NRG2O14511 850 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-220ENST00000541963 NPR3P17342 541 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 MPSTP25325 297 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 PHKA2P46019 1235 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 POU4F2Q12837 409 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 IDI1Q13907 227 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 LAPTM4AQ15012 233 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 WDR44Q5JSH3 913 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 FOXD4L5Q5VV16 416 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-220ENST00000541963 POTEAQ6S8J7 498 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 BICDL1Q6ZP65 573 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 RHPN1Q8TCX5 695 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 FOXD4L4Q8WXT5 416 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-220ENST00000541963 QTRT2Q9H974 415 aaKnown RBP7.91□□□□□ -1.14
CPSF7-220ENST00000541963 AMOTL2Q9Y2J4 779 aa7.91□□□□□ -1.14
CPSF7-220ENST00000541963 RPRD2Q5VT52 1461 aaKnown RBP7.91□□□□□ -1.14
CPSF7-220ENST00000541963 DGKZQ13574 1117 aa7.9□□□□□ -1.14
CPSF7-220ENST00000541963 SH3PXD2AQ5TCZ1 1133 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms