RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 SF3B3Q15393 1217 aaKnown RBP26.37■■□□□ 1.81
MSRB3-211ENST00000541897 CRY2Q49AN0 593 aa26.37■■□□□ 1.81
MSRB3-211ENST00000541897 ANKRD31Q8N7Z5 1873 aa26.36■■□□□ 1.81
MSRB3-211ENST00000541897 CCDC24Q8N4L8 307 aa26.36■■□□□ 1.81
MSRB3-211ENST00000541897 JARID2Q92833 1246 aaPredicted RBP26.36■■□□□ 1.81
MSRB3-211ENST00000541897 TNRC6CQ9HCJ0 1690 aaKnown RBP26.34■■□□□ 1.81
MSRB3-211ENST00000541897 CSF1RP07333 972 aa26.34■■□□□ 1.81
MSRB3-211ENST00000541897 CTSWP56202 376 aa26.34■■□□□ 1.81
MSRB3-211ENST00000541897 FOXO4P98177 505 aa26.34■■□□□ 1.81
MSRB3-211ENST00000541897 KAZALD1Q96I82 304 aa26.34■■□□□ 1.81
MSRB3-211ENST00000541897 SUCLG2Q96I99 432 aa26.34■■□□□ 1.81
MSRB3-211ENST00000541897 ZBTB40Q9NUA8 1239 aa26.34■■□□□ 1.81
MSRB3-211ENST00000541897 CEP350Q5VT06 3117 aa26.34■■□□□ 1.81
MSRB3-211ENST00000541897 GNAI2P04899 355 aa26.33■■□□□ 1.81
MSRB3-211ENST00000541897 AAMPQ13685 434 aa26.33■■□□□ 1.81
MSRB3-211ENST00000541897 RABL6Q3YEC7 729 aaPredicted RBP26.33■■□□□ 1.81
MSRB3-211ENST00000541897 RTL9Q8NET4 1388 aa26.33■■□□□ 1.8
MSRB3-211ENST00000541897 KCNA3P22001 575 aa26.32■■□□□ 1.8
MSRB3-211ENST00000541897 ARHGAP27Q6ZUM4 889 aa26.32■■□□□ 1.8
MSRB3-211ENST00000541897 TTLL11Q8NHH1 800 aa26.32■■□□□ 1.8
MSRB3-211ENST00000541897 ARFGEF1Q9Y6D6 1849 aa26.32■■□□□ 1.8
MSRB3-211ENST00000541897 H0YIN7 160 aa26.31■■□□□ 1.8
MSRB3-211ENST00000541897 SRGNP10124 158 aa26.31■■□□□ 1.8
MSRB3-211ENST00000541897 HOXA10P31260 410 aaPredicted RBP26.31■■□□□ 1.8
MSRB3-211ENST00000541897 CCDC152Q4G0S7 254 aa26.31■■□□□ 1.8
MSRB3-211ENST00000541897 C3orf67Q6ZVT6 689 aa26.31■■□□□ 1.8
MSRB3-211ENST00000541897 NPR1P16066 1061 aa26.3■■□□□ 1.8
MSRB3-211ENST00000541897 BICC1Q9H694 974 aaKnown RBP26.3■■□□□ 1.8
MSRB3-211ENST00000541897 LRRFIP2Q9Y608 721 aaKnown RBP26.3■■□□□ 1.8
MSRB3-211ENST00000541897 MYH3P11055 1940 aa26.29■■□□□ 1.8
MSRB3-211ENST00000541897 EPHA10Q5JZY3 1008 aa26.29■■□□□ 1.8
MSRB3-211ENST00000541897 STYK1Q6J9G0 422 aa26.29■■□□□ 1.8
MSRB3-211ENST00000541897 C2CD5Q86YS7 1000 aa26.29■■□□□ 1.8
MSRB3-211ENST00000541897 MASTLQ96GX5 879 aa26.29■■□□□ 1.8
MSRB3-211ENST00000541897 CRBNQ96SW2 442 aa26.29■■□□□ 1.8
MSRB3-211ENST00000541897 MTX1Q13505 466 aa26.28■■□□□ 1.8
MSRB3-211ENST00000541897 ANKRD44Q8N8A2 993 aa26.28■■□□□ 1.8
MSRB3-211ENST00000541897 RPGRQ92834 1020 aaKnown RBP26.28■■□□□ 1.8
MSRB3-211ENST00000541897 LMBR1LQ6UX01 489 aa26.27■■□□□ 1.8
MSRB3-211ENST00000541897 RBM17Q96I25 401 aaKnown RBP26.27■■□□□ 1.8
MSRB3-211ENST00000541897 CRAMP1Q96RY5 1269 aa26.27■■□□□ 1.8
MSRB3-211ENST00000541897 DLEC1Q9Y238 1755 aa26.27■■□□□ 1.8
MSRB3-211ENST00000541897 COL11A2P13942 1736 aaPredicted RBP26.26■■□□□ 1.79
MSRB3-211ENST00000541897 CHRNA5P30532 468 aa26.26■■□□□ 1.79
MSRB3-211ENST00000541897 IFFO2Q5TF58 517 aa26.26■■□□□ 1.79
MSRB3-211ENST00000541897 PIM2Q9P1W9 311 aa26.26■■□□□ 1.79
MSRB3-211ENST00000541897 KIF3CO14782 793 aa26.25■■□□□ 1.79
MSRB3-211ENST00000541897 ALDH1B1P30837 517 aa26.25■■□□□ 1.79
MSRB3-211ENST00000541897 DDX46Q7L014 1031 aaKnown RBP26.25■■□□□ 1.79
MSRB3-211ENST00000541897 GREM2Q9H772 168 aa26.24■■□□□ 1.79
MSRB3-211ENST00000541897 CNKSR1Q969H4 720 aa26.23■■□□□ 1.79
MSRB3-211ENST00000541897 FAM161AQ3B820 660 aa26.22■■□□□ 1.79
MSRB3-211ENST00000541897 DALRD3Q5D0E6 543 aaKnown RBP26.22■■□□□ 1.79
MSRB3-211ENST00000541897 RPAP2Q8IXW5 612 aaPredicted RBP26.22■■□□□ 1.79
MSRB3-211ENST00000541897 CDC5LQ99459 802 aaKnown RBP26.22■■□□□ 1.79
MSRB3-211ENST00000541897 ITGA6P23229 1130 aa26.21■■□□□ 1.79
MSRB3-211ENST00000541897 IFIT5Q13325 482 aaKnown RBP26.21■■□□□ 1.79
MSRB3-211ENST00000541897 GRAPQ13588 217 aa26.21■■□□□ 1.79
MSRB3-211ENST00000541897 CCDC57Q2TAC2 916 aa26.21■■□□□ 1.79
MSRB3-211ENST00000541897 EXOC6Q8TAG9 804 aa26.21■■□□□ 1.79
MSRB3-211ENST00000541897 GRAPLQ8TC17 118 aaPredicted RBP26.21■■□□□ 1.79
MSRB3-211ENST00000541897 SBF1O95248 1867 aa26.21■■□□□ 1.79
MSRB3-211ENST00000541897 ANKRD18BA2A2Z9 1011 aa26.2■■□□□ 1.78
MSRB3-211ENST00000541897 BBOX1O75936 387 aa26.2■■□□□ 1.78
MSRB3-211ENST00000541897 ATP8B2P98198 1209 aa26.2■■□□□ 1.78
MSRB3-211ENST00000541897 CEP85Q6P2H3 762 aa26.2■■□□□ 1.78
MSRB3-211ENST00000541897 TMC4Q7Z404 712 aa26.2■■□□□ 1.78
MSRB3-211ENST00000541897 ZNF622Q969S3 477 aaKnown RBP eCLIP26.2■■□□□ 1.78
MSRB3-211ENST00000541897 C1orf115Q9H7X2 142 aa26.2■■□□□ 1.78
MSRB3-211ENST00000541897 HSPA6P17066 643 aa26.19■■□□□ 1.78
MSRB3-211ENST00000541897 C9orf131Q5VYM1 1079 aa26.19■■□□□ 1.78
MSRB3-211ENST00000541897 TTLL6Q8N841 843 aa26.19■■□□□ 1.78
MSRB3-211ENST00000541897 CHMP3Q9Y3E7 222 aa26.19■■□□□ 1.78
MSRB3-211ENST00000541897 CCDC85AQ96PX6 553 aaPredicted RBP26.18■■□□□ 1.78
MSRB3-211ENST00000541897 SEC31BQ9NQW1 1179 aa26.18■■□□□ 1.78
MSRB3-211ENST00000541897 SRGAP3O43295 1099 aa26.17■■□□□ 1.78
MSRB3-211ENST00000541897 NEFLP07196 543 aa26.17■■□□□ 1.78
MSRB3-211ENST00000541897 RFX5P48382 616 aaPredicted RBP26.17■■□□□ 1.78
MSRB3-211ENST00000541897 RPS8P62241 208 aaKnown RBP26.17■■□□□ 1.78
MSRB3-211ENST00000541897 POLA2Q14181 598 aa26.17■■□□□ 1.78
MSRB3-211ENST00000541897 SSH3Q8TE77 659 aa26.17■■□□□ 1.78
MSRB3-211ENST00000541897 IRX6P78412 446 aaPredicted RBP26.16■■□□□ 1.78
MSRB3-211ENST00000541897 ANKRD18AQ8IVF6 992 aa26.16■■□□□ 1.78
MSRB3-211ENST00000541897 CELF1Q92879 486 aaKnown RBP26.16■■□□□ 1.78
MSRB3-211ENST00000541897 NMRK2Q9NPI5 230 aa26.16■■□□□ 1.78
MSRB3-211ENST00000541897 FBXO3Q9UK99 471 aa26.16■■□□□ 1.78
MSRB3-211ENST00000541897 PNMA6EA0A0J9YXQ4 647 aa26.15■■□□□ 1.78
MSRB3-211ENST00000541897 PRPF40BQ6NWY9 871 aaKnown RBP26.15■■□□□ 1.78
MSRB3-211ENST00000541897 IGHMBP2P38935 993 aaKnown RBP26.14■■□□□ 1.78
MSRB3-211ENST00000541897 PTPN12Q05209 780 aaKnown RBP26.14■■□□□ 1.78
MSRB3-211ENST00000541897 COPRSQ9NQ92 184 aa26.14■■□□□ 1.78
MSRB3-211ENST00000541897 BSDC1Q9NW68 430 aaPredicted RBP26.14■■□□□ 1.78
MSRB3-211ENST00000541897 HMMRO75330 724 aa26.13■■□□□ 1.77
MSRB3-211ENST00000541897 PPEF1O14829 653 aaPredicted RBP26.12■■□□□ 1.77
MSRB3-211ENST00000541897 TAF7LQ5H9L4 462 aa26.12■■□□□ 1.77
MSRB3-211ENST00000541897 SIRT2Q8IXJ6 389 aa26.12■■□□□ 1.77
MSRB3-211ENST00000541897 C7orf43Q8WVR3 580 aa26.12■■□□□ 1.77
MSRB3-211ENST00000541897 RNF181Q9P0P0 153 aa26.12■■□□□ 1.77
MSRB3-211ENST00000541897 ATP6V0A2Q9Y487 856 aa26.12■■□□□ 1.77
MSRB3-211ENST00000541897 CCDC88AQ3V6T2 1871 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms