RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
CHFR-220ENST00000541817 DPP8Q6V1X1 898 aaPredicted RBP13.2□□□□□ -0.3
CHFR-220ENST00000541817 NYXQ9GZU5 481 aa13.2□□□□□ -0.3
CHFR-220ENST00000541817 ATP6V0A2Q9Y487 856 aa13.2□□□□□ -0.3
CHFR-220ENST00000541817 CDHR2Q9BYE9 1310 aa13.19□□□□□ -0.3
CHFR-220ENST00000541817 UBE2Q2LH0YL09 131 aa13.19□□□□□ -0.3
CHFR-220ENST00000541817 PSMD14O00487 310 aa13.19□□□□□ -0.3
CHFR-220ENST00000541817 FKTNO75072 461 aa13.19□□□□□ -0.3
CHFR-220ENST00000541817 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
CHFR-220ENST00000541817 SUPT20HQ8NEM7 779 aa13.19□□□□□ -0.3
CHFR-220ENST00000541817 TMX4Q9H1E5 349 aaPredicted RBP13.19□□□□□ -0.3
CHFR-220ENST00000541817 KCNQ5Q9NR82 932 aa13.19□□□□□ -0.3
CHFR-220ENST00000541817 NUP98P52948 1817 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 UBN2Q6ZU65 1347 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 H0YGN5 161 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 KIAA2012Q0VF49 1180 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
CHFR-220ENST00000541817 MPNDQ8N594 471 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
CHFR-220ENST00000541817 VPS33BQ9H267 617 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 GGA3Q9NZ52 723 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 TRIM17Q9Y577 477 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
CHFR-220ENST00000541817 KIF7Q2M1P5 1343 aa13.17□□□□□ -0.3
CHFR-220ENST00000541817 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
CHFR-220ENST00000541817 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
CHFR-220ENST00000541817 DBNDD1Q9H9R9 158 aa13.17□□□□□ -0.3
CHFR-220ENST00000541817 HTTP42858 3142 aa13.17□□□□□ -0.3
CHFR-220ENST00000541817 TAF1P21675 1872 aa13.16□□□□□ -0.3
CHFR-220ENST00000541817 ABCC4O15439 1325 aa13.16□□□□□ -0.3
CHFR-220ENST00000541817 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
CHFR-220ENST00000541817 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
CHFR-220ENST00000541817 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
CHFR-220ENST00000541817 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
CHFR-220ENST00000541817 CENPFP49454 3210 aa13.16□□□□□ -0.3
CHFR-220ENST00000541817 A0A0C4DFX4 3053 aa13.15□□□□□ -0.3
CHFR-220ENST00000541817 SNRPA1P09661 255 aaKnown RBP13.15□□□□□ -0.3
CHFR-220ENST00000541817 KIF4BQ2VIQ3 1234 aa13.15□□□□□ -0.3
CHFR-220ENST00000541817 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.3
CHFR-220ENST00000541817 OTOP1Q7RTM1 612 aa13.15□□□□□ -0.3
CHFR-220ENST00000541817 ZBTB3Q9H5J0 574 aa13.15□□□□□ -0.3
CHFR-220ENST00000541817 TM4SF4P48230 202 aa13.14□□□□□ -0.31
CHFR-220ENST00000541817 INTS3Q68E01 1043 aaKnown RBP13.14□□□□□ -0.31
CHFR-220ENST00000541817 DPF2Q92785 391 aa13.14□□□□□ -0.31
CHFR-220ENST00000541817 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
CHFR-220ENST00000541817 RBBP6Q7Z6E9 1792 aaKnown RBP13.14□□□□□ -0.31
CHFR-220ENST00000541817 TRIOBPQ9H2D6 2365 aa13.14□□□□□ -0.31
CHFR-220ENST00000541817 COL6A3P12111 3177 aa13.14□□□□□ -0.31
CHFR-220ENST00000541817 NTSR2O95665 410 aa13.13□□□□□ -0.31
CHFR-220ENST00000541817 MYCP01106 439 aaPredicted RBP13.13□□□□□ -0.31
CHFR-220ENST00000541817 DOK7Q18PE1 504 aa13.13□□□□□ -0.31
CHFR-220ENST00000541817 ANGEL2Q5VTE6 544 aaKnown RBP13.13□□□□□ -0.31
CHFR-220ENST00000541817 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
CHFR-220ENST00000541817 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
CHFR-220ENST00000541817 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
CHFR-220ENST00000541817 SCARF1Q14162 830 aa13.12□□□□□ -0.31
CHFR-220ENST00000541817 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
CHFR-220ENST00000541817 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
CHFR-220ENST00000541817 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
CHFR-220ENST00000541817 RRP7AQ9Y3A4 280 aaKnown RBP13.12□□□□□ -0.31
CHFR-220ENST00000541817 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
CHFR-220ENST00000541817 MAP3K15Q6ZN16 1313 aa13.12□□□□□ -0.31
CHFR-220ENST00000541817 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
CHFR-220ENST00000541817 RTL9Q8NET4 1388 aa13.11□□□□□ -0.31
CHFR-220ENST00000541817 U2SURPO15042 1029 aaKnown RBP13.11□□□□□ -0.31
CHFR-220ENST00000541817 RGL2O15211 777 aa13.11□□□□□ -0.31
CHFR-220ENST00000541817 MYL6BP14649 208 aa13.11□□□□□ -0.31
CHFR-220ENST00000541817 PTPN22Q9Y2R2 807 aa13.11□□□□□ -0.31
CHFR-220ENST00000541817 LAMB2P55268 1798 aa13.11□□□□□ -0.31
CHFR-220ENST00000541817 BRCA2P51587 3418 aa13.1□□□□□ -0.31
CHFR-220ENST00000541817 CEMIPQ8WUJ3 1361 aa13.1□□□□□ -0.31
CHFR-220ENST00000541817 PRKG1Q13976 671 aa13.1□□□□□ -0.31
CHFR-220ENST00000541817 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
CHFR-220ENST00000541817 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
CHFR-220ENST00000541817 MCM10Q7L590 875 aa13.1□□□□□ -0.31
CHFR-220ENST00000541817 CD99L2Q8TCZ2 262 aa13.1□□□□□ -0.31
CHFR-220ENST00000541817 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
CHFR-220ENST00000541817 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
CHFR-220ENST00000541817 ECE2O60344 883 aa13.09□□□□□ -0.31
CHFR-220ENST00000541817 BBOX1O75936 387 aa13.09□□□□□ -0.31
CHFR-220ENST00000541817 HCLS1P14317 486 aaPredicted RBP13.09□□□□□ -0.31
CHFR-220ENST00000541817 CAP1Q01518 475 aa13.09□□□□□ -0.31
CHFR-220ENST00000541817 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
CHFR-220ENST00000541817 KIF6Q6ZMV9 814 aa13.09□□□□□ -0.31
CHFR-220ENST00000541817 ZNF34Q8IZ26 560 aa13.09□□□□□ -0.31
CHFR-220ENST00000541817 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
CHFR-220ENST00000541817 TMEM106CQ9BVX2 250 aa13.09□□□□□ -0.31
CHFR-220ENST00000541817 C6orf229H3BNL8 230 aa13.08□□□□□ -0.32
CHFR-220ENST00000541817 SCN9AQ15858 1988 aa13.07□□□□□ -0.32
CHFR-220ENST00000541817 RPS12P25398 132 aaKnown RBP13.07□□□□□ -0.32
CHFR-220ENST00000541817 FKBP1BP68106 108 aa13.07□□□□□ -0.32
CHFR-220ENST00000541817 PTPN12Q05209 780 aaKnown RBP13.07□□□□□ -0.32
CHFR-220ENST00000541817 SREBF2Q12772 1141 aa13.07□□□□□ -0.32
CHFR-220ENST00000541817 PPP1R42Q7Z4L9 355 aa13.07□□□□□ -0.32
CHFR-220ENST00000541817 ARMC5Q96C12 935 aa13.07□□□□□ -0.32
CHFR-220ENST00000541817 POLLQ9UGP5 575 aa13.07□□□□□ -0.32
CHFR-220ENST00000541817 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
CHFR-220ENST00000541817 FZD1Q9UP38 647 aa13.07□□□□□ -0.32
CHFR-220ENST00000541817 IBTKQ9P2D0 1353 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms