RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
SCARB1-207ENST00000541661 XAGE3Q8WTP9 111 aa17.17■□□□□ 0.34
SCARB1-207ENST00000541661 HCLS1P14317 486 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-207ENST00000541661 GRAPQ13588 217 aa17.16■□□□□ 0.34
SCARB1-207ENST00000541661 TNIP1Q15025 636 aa17.16■□□□□ 0.34
SCARB1-207ENST00000541661 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
SCARB1-207ENST00000541661 TMC4Q7Z404 712 aa17.16■□□□□ 0.34
SCARB1-207ENST00000541661 GRAPLQ8TC17 118 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-207ENST00000541661 ZC3H15Q8WU90 426 aaKnown RBP17.16■□□□□ 0.34
SCARB1-207ENST00000541661 ABHD8Q96I13 439 aa17.16■□□□□ 0.34
SCARB1-207ENST00000541661 HHIPL1Q96JK4 782 aa17.16■□□□□ 0.34
SCARB1-207ENST00000541661 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
SCARB1-207ENST00000541661 TAF1P21675 1872 aa17.16■□□□□ 0.34
SCARB1-207ENST00000541661 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
SCARB1-207ENST00000541661 PAXIP1Q6ZW49 1069 aaPredicted RBP17.15■□□□□ 0.34
SCARB1-207ENST00000541661 SAPCD2Q86UD0 394 aa17.15■□□□□ 0.34
SCARB1-207ENST00000541661 BEGAINQ9BUH8 593 aa17.15■□□□□ 0.34
SCARB1-207ENST00000541661 LRRC37AA6NMS7 1700 aa17.15■□□□□ 0.34
SCARB1-207ENST00000541661 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
SCARB1-207ENST00000541661 CHL1O00533 1208 aa17.14■□□□□ 0.33
SCARB1-207ENST00000541661 HIRAP54198 1017 aaPredicted RBP17.14■□□□□ 0.33
SCARB1-207ENST00000541661 RALBP1Q15311 655 aa17.14■□□□□ 0.33
SCARB1-207ENST00000541661 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
SCARB1-207ENST00000541661 DUOX1Q9NRD9 1551 aa17.14■□□□□ 0.33
SCARB1-207ENST00000541661 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
SCARB1-207ENST00000541661 RAD17O75943 681 aa17.13■□□□□ 0.33
SCARB1-207ENST00000541661 CELF2O95319 508 aaKnown RBP17.13■□□□□ 0.33
SCARB1-207ENST00000541661 BCL2L13Q9BXK5 485 aa17.13■□□□□ 0.33
SCARB1-207ENST00000541661 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-207ENST00000541661 YDJCA8MPS7 323 aa17.12■□□□□ 0.33
SCARB1-207ENST00000541661 AOC2O75106 756 aa17.12■□□□□ 0.33
SCARB1-207ENST00000541661 GRM1Q13255 1194 aa17.12■□□□□ 0.33
SCARB1-207ENST00000541661 CNOT7Q9UIV1 285 aaKnown RBP17.12■□□□□ 0.33
SCARB1-207ENST00000541661 KRT24Q2M2I5 525 aa17.11■□□□□ 0.33
SCARB1-207ENST00000541661 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
SCARB1-207ENST00000541661 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
SCARB1-207ENST00000541661 DPF2Q92785 391 aa17.11■□□□□ 0.33
SCARB1-207ENST00000541661 H7C1D1 291 aa17.1■□□□□ 0.33
SCARB1-207ENST00000541661 CA12O43570 354 aa17.1■□□□□ 0.33
SCARB1-207ENST00000541661 HOXB7P09629 217 aa17.1■□□□□ 0.33
SCARB1-207ENST00000541661 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
SCARB1-207ENST00000541661 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
SCARB1-207ENST00000541661 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
SCARB1-207ENST00000541661 CHPF2Q9P2E5 772 aa17.1■□□□□ 0.33
SCARB1-207ENST00000541661 TRIM35Q9UPQ4 493 aa17.1■□□□□ 0.33
SCARB1-207ENST00000541661 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-207ENST00000541661 ANKRD13DQ6ZTN6 518 aa17.09■□□□□ 0.33
SCARB1-207ENST00000541661 TRIM28Q13263 835 aaKnown RBP17.08■□□□□ 0.32
SCARB1-207ENST00000541661 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
SCARB1-207ENST00000541661 WASHC4Q2M389 1173 aa17.08■□□□□ 0.32
SCARB1-207ENST00000541661 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
SCARB1-207ENST00000541661 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.32
SCARB1-207ENST00000541661 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
SCARB1-207ENST00000541661 DBF4Q9UBU7 674 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-207ENST00000541661 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
SCARB1-207ENST00000541661 RGS19P49795 217 aa17.07■□□□□ 0.32
SCARB1-207ENST00000541661 HDGFL1Q5TGJ6 251 aa17.07■□□□□ 0.32
SCARB1-207ENST00000541661 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
SCARB1-207ENST00000541661 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
SCARB1-207ENST00000541661 NSFL1CQ9UNZ2 370 aaKnown RBP17.07■□□□□ 0.32
SCARB1-207ENST00000541661 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-207ENST00000541661 POLR2AP24928 1970 aaKnown RBP17.06■□□□□ 0.32
SCARB1-207ENST00000541661 PSMD14O00487 310 aa17.06■□□□□ 0.32
SCARB1-207ENST00000541661 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
SCARB1-207ENST00000541661 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
SCARB1-207ENST00000541661 ZNF408Q9H9D4 720 aa17.06■□□□□ 0.32
SCARB1-207ENST00000541661 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
SCARB1-207ENST00000541661 POLLQ9UGP5 575 aa17.06■□□□□ 0.32
SCARB1-207ENST00000541661 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
SCARB1-207ENST00000541661 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
SCARB1-207ENST00000541661 COL4A1P02462 1669 aa17.05■□□□□ 0.32
SCARB1-207ENST00000541661 ATP5J2-PTCD1G3V325 749 aa17.05■□□□□ 0.32
SCARB1-207ENST00000541661 RPS12P25398 132 aaKnown RBP17.05■□□□□ 0.32
SCARB1-207ENST00000541661 DBNDD1Q9H9R9 158 aa17.05■□□□□ 0.32
SCARB1-207ENST00000541661 CASP8AP2Q9UKL3 1982 aa17.04■□□□□ 0.32
SCARB1-207ENST00000541661 CCDC85CA6NKD9 419 aa17.04■□□□□ 0.32
SCARB1-207ENST00000541661 GPSM2P81274 684 aa17.04■□□□□ 0.32
SCARB1-207ENST00000541661 NOGQ13253 232 aa17.04■□□□□ 0.32
SCARB1-207ENST00000541661 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
SCARB1-207ENST00000541661 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
SCARB1-207ENST00000541661 ZNF428Q96B54 188 aa17.04■□□□□ 0.32
SCARB1-207ENST00000541661 CFAP44Q96MT7 982 aa17.04■□□□□ 0.32
SCARB1-207ENST00000541661 EYA3Q99504 573 aa17.04■□□□□ 0.32
SCARB1-207ENST00000541661 C6orf229H3BNL8 230 aa17.03■□□□□ 0.32
SCARB1-207ENST00000541661 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
SCARB1-207ENST00000541661 HUNKP57058 714 aa17.03■□□□□ 0.32
SCARB1-207ENST00000541661 RPS8P62241 208 aaKnown RBP17.03■□□□□ 0.32
SCARB1-207ENST00000541661 TBC1D10BQ4KMP7 808 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-207ENST00000541661 KCNQ5Q9NR82 932 aa17.03■□□□□ 0.32
SCARB1-207ENST00000541661 RTL9Q8NET4 1388 aa17.02■□□□□ 0.32
SCARB1-207ENST00000541661 IRS4O14654 1257 aaPredicted RBP17.02■□□□□ 0.32
SCARB1-207ENST00000541661 ECE2O60344 883 aa17.02■□□□□ 0.32
SCARB1-207ENST00000541661 EGFRP00533 1210 aa17.02■□□□□ 0.32
SCARB1-207ENST00000541661 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
SCARB1-207ENST00000541661 DLK2Q6UY11 383 aa17.02■□□□□ 0.32
SCARB1-207ENST00000541661 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.32
SCARB1-207ENST00000541661 TBC1D16Q8TBP0 767 aa17.02■□□□□ 0.32
SCARB1-207ENST00000541661 PODXL2Q9NZ53 605 aa17.02■□□□□ 0.32
SCARB1-207ENST00000541661 SCN9AQ15858 1988 aa17.01■□□□□ 0.31
SCARB1-207ENST00000541661 FAM155AB1AL88 458 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms