RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 PHACTR3Q96KR7 559 aa8.4□□□□□ -1.06
EPHA4-214ENST00000541600 USP54Q70EL1 1684 aa8.4□□□□□ -1.07
EPHA4-214ENST00000541600 C6orf229H3BNL8 230 aa8.39□□□□□ -1.07
EPHA4-214ENST00000541600 ZBTB7AO95365 584 aa8.39□□□□□ -1.07
EPHA4-214ENST00000541600 HSPA6P17066 643 aa8.39□□□□□ -1.07
EPHA4-214ENST00000541600 PRELPP51888 382 aa8.39□□□□□ -1.07
EPHA4-214ENST00000541600 NR6A1Q15406 480 aa8.39□□□□□ -1.07
EPHA4-214ENST00000541600 NME9Q86XW9 330 aa8.39□□□□□ -1.07
EPHA4-214ENST00000541600 BCL2L13Q9BXK5 485 aa8.39□□□□□ -1.07
EPHA4-214ENST00000541600 API5Q9BZZ5 524 aaKnown RBP8.39□□□□□ -1.07
EPHA4-214ENST00000541600 CHD4Q14839 1912 aa8.39□□□□□ -1.07
EPHA4-214ENST00000541600 USP6P35125 1406 aa8.38□□□□□ -1.07
EPHA4-214ENST00000541600 CASZ1Q86V15 1759 aa8.38□□□□□ -1.07
EPHA4-214ENST00000541600 SPATA31A3Q5VYP0 1347 aa8.38□□□□□ -1.07
EPHA4-214ENST00000541600 CHL1O00533 1208 aa8.38□□□□□ -1.07
EPHA4-214ENST00000541600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.38□□□□□ -1.07
EPHA4-214ENST00000541600 ANTXR1Q9H6X2 564 aa8.38□□□□□ -1.07
EPHA4-214ENST00000541600 EMILIN1Q9Y6C2 1016 aa8.38□□□□□ -1.07
EPHA4-214ENST00000541600 SOS1Q07889 1333 aaPredicted RBP8.37□□□□□ -1.07
EPHA4-214ENST00000541600 PROX2Q3B8N5 592 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 GRIPAP1Q4V328 841 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 ESCO1Q5FWF5 840 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 BMP2KLQ5H9B9 411 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 INTS3Q68E01 1043 aaKnown RBP8.37□□□□□ -1.07
EPHA4-214ENST00000541600 PTF1AQ7RTS3 328 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 ITPRIPQ8IWB1 547 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 SNX21Q969T3 373 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 LAS1LQ9Y4W2 734 aaKnown RBP8.37□□□□□ -1.07
EPHA4-214ENST00000541600 ANKARQ7Z5J8 1434 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 PLCH1Q4KWH8 1693 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 THSD7AQ9UPZ6 1657 aa8.37□□□□□ -1.07
EPHA4-214ENST00000541600 ARHGEF10O15013 1369 aa8.36□□□□□ -1.07
EPHA4-214ENST00000541600 RBM47A0AV96 593 aaKnown RBP8.36□□□□□ -1.07
EPHA4-214ENST00000541600 UNCXA6NJT0 531 aa8.36□□□□□ -1.07
EPHA4-214ENST00000541600 HTATSF1O43719 755 aaKnown RBP8.36□□□□□ -1.07
EPHA4-214ENST00000541600 SWT1Q5T5J6 900 aaKnown RBP8.36□□□□□ -1.07
EPHA4-214ENST00000541600 TMEM164Q5U3C3 297 aa8.36□□□□□ -1.07
EPHA4-214ENST00000541600 CHD1LQ86WJ1 897 aa8.36□□□□□ -1.07
EPHA4-214ENST00000541600 BABAM1Q9NWV8 329 aa8.36□□□□□ -1.07
EPHA4-214ENST00000541600 ZMIZ1Q9ULJ6 1067 aa8.36□□□□□ -1.07
EPHA4-214ENST00000541600 KDRP35968 1356 aa8.35□□□□□ -1.07
EPHA4-214ENST00000541600 ACEP12821 1306 aa8.35□□□□□ -1.07
EPHA4-214ENST00000541600 SPATA31A5Q5VU36 1347 aa8.35□□□□□ -1.07
EPHA4-214ENST00000541600 NPHP3Q7Z494 1330 aa8.35□□□□□ -1.07
EPHA4-214ENST00000541600 SPATA31A7Q8IWB4 1347 aa8.35□□□□□ -1.07
EPHA4-214ENST00000541600 NRAPQ86VF7 1730 aa8.35□□□□□ -1.07
EPHA4-214ENST00000541600 EIF4A2Q14240 407 aaKnown RBP8.35□□□□□ -1.07
EPHA4-214ENST00000541600 TWISTNBQ3B726 338 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-214ENST00000541600 NFATC2IPQ8NCF5 419 aa8.35□□□□□ -1.07
EPHA4-214ENST00000541600 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
EPHA4-214ENST00000541600 PTPRCP08575 1304 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 A0A0G2JS52 829 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 HMOX1P09601 288 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 FUT2Q10981 343 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 NR1H3Q13133 447 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 NBPF14Q5TI25 921 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 RPAP2Q8IXW5 612 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-214ENST00000541600 C8orf58Q8NAV2 365 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 C22orf23Q9BZE7 217 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 DCTPP1Q9H773 170 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 CRB1P82279 1406 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 PEAK1Q9H792 1746 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 SBNO1A3KN83 1393 aa8.34□□□□□ -1.07
EPHA4-214ENST00000541600 POTEIP0CG38 1075 aa8.33□□□□□ -1.08
EPHA4-214ENST00000541600 SLC4A3P48751 1232 aa8.33□□□□□ -1.08
EPHA4-214ENST00000541600 TSPYL6Q8N831 410 aa8.33□□□□□ -1.08
EPHA4-214ENST00000541600 UBE2Q2Q8WVN8 375 aa8.33□□□□□ -1.08
EPHA4-214ENST00000541600 SYMPKQ92797 1274 aaKnown RBP8.33□□□□□ -1.08
EPHA4-214ENST00000541600 BTG4Q9NY30 223 aa8.33□□□□□ -1.08
EPHA4-214ENST00000541600 NWD2Q9ULI1 1742 aa8.33□□□□□ -1.08
EPHA4-214ENST00000541600 RTL1A6NKG5 1358 aa8.33□□□□□ -1.08
EPHA4-214ENST00000541600 FMN2Q9NZ56 1722 aa8.32□□□□□ -1.08
EPHA4-214ENST00000541600 ERCC3P19447 782 aa8.32□□□□□ -1.08
EPHA4-214ENST00000541600 FBLN1P23142 703 aa8.32□□□□□ -1.08
EPHA4-214ENST00000541600 FAM196AQ6ZSG2 479 aa8.32□□□□□ -1.08
EPHA4-214ENST00000541600 SIRT2Q8IXJ6 389 aa8.32□□□□□ -1.08
EPHA4-214ENST00000541600 IGSF5Q9NSI5 407 aa8.32□□□□□ -1.08
EPHA4-214ENST00000541600 NOVA2Q9UNW9 492 aaKnown RBP8.32□□□□□ -1.08
EPHA4-214ENST00000541600 FLT4P35916 1363 aa8.32□□□□□ -1.08
EPHA4-214ENST00000541600 IGSF1Q8N6C5 1336 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 PIK3CDO00329 1044 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 DDIT3P35638 169 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 ATP6V1AP38606 617 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 RRS1Q15050 365 aaKnown RBP8.31□□□□□ -1.08
EPHA4-214ENST00000541600 DESI1Q6ICB0 168 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 SULT6B1Q6IMI4 303 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 KRT28Q7Z3Y7 464 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 PLEKHM2Q8IWE5 1019 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 ANKRD44Q8N8A2 993 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 CHMP5Q9NZZ3 219 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 PCDH10Q9P2E7 1040 aa8.31□□□□□ -1.08
EPHA4-214ENST00000541600 USP17L3A6NCW0 530 aa8.3□□□□□ -1.08
EPHA4-214ENST00000541600 USP17L4A6NCW7 530 aa8.3□□□□□ -1.08
EPHA4-214ENST00000541600 FRAT2O75474 233 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-214ENST00000541600 FBXO45P0C2W1 286 aa8.3□□□□□ -1.08
EPHA4-214ENST00000541600 SSFA2P28290 1259 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms