RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 GOLGA2Q08379 1002 aa18.15■□□□□ 0.5
SUDS3-203ENST00000541591 CELF1Q92879 486 aaKnown RBP18.15■□□□□ 0.5
SUDS3-203ENST00000541591 CALD1Q05682 793 aaKnown RBP18.14■□□□□ 0.49
SUDS3-203ENST00000541591 GRAPQ13588 217 aa18.14■□□□□ 0.49
SUDS3-203ENST00000541591 DPP8Q6V1X1 898 aaPredicted RBP18.14■□□□□ 0.49
SUDS3-203ENST00000541591 NIM1KQ8IY84 436 aa18.14■□□□□ 0.49
SUDS3-203ENST00000541591 GRAPLQ8TC17 118 aaPredicted RBP18.14■□□□□ 0.49
SUDS3-203ENST00000541591 CCDC85AQ96PX6 553 aaPredicted RBP18.14■□□□□ 0.49
SUDS3-203ENST00000541591 A0A1B0GUL6 1792 aa18.13■□□□□ 0.49
SUDS3-203ENST00000541591 ANP32CO43423 234 aa18.13■□□□□ 0.49
SUDS3-203ENST00000541591 MAP1SQ66K74 1059 aaPredicted RBP18.13■□□□□ 0.49
SUDS3-203ENST00000541591 LDHDQ86WU2 507 aa18.13■□□□□ 0.49
SUDS3-203ENST00000541591 GPC2Q8N158 579 aa18.13■□□□□ 0.49
SUDS3-203ENST00000541591 GPR101Q96P66 508 aaPredicted RBP18.13■□□□□ 0.49
SUDS3-203ENST00000541591 TMX4Q9H1E5 349 aaPredicted RBP18.13■□□□□ 0.49
SUDS3-203ENST00000541591 MKRN1Q9UHC7 482 aaKnown RBP18.13■□□□□ 0.49
SUDS3-203ENST00000541591 IRS4O14654 1257 aaPredicted RBP18.12■□□□□ 0.49
SUDS3-203ENST00000541591 SP8Q8IXZ3 490 aa18.12■□□□□ 0.49
SUDS3-203ENST00000541591 MPNDQ8N594 471 aa18.12■□□□□ 0.49
SUDS3-203ENST00000541591 EPS15P42566 896 aa18.11■□□□□ 0.49
SUDS3-203ENST00000541591 SCNN1DP51172 638 aa18.11■□□□□ 0.49
SUDS3-203ENST00000541591 FMR1Q06787 632 aaKnown RBP eCLIP18.11■□□□□ 0.49
SUDS3-203ENST00000541591 G2E3Q7L622 706 aa18.11■□□□□ 0.49
SUDS3-203ENST00000541591 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
SUDS3-203ENST00000541591 ZNF646O15015 1829 aaPredicted RBP18.1■□□□□ 0.49
SUDS3-203ENST00000541591 BBOX1O75936 387 aa18.1■□□□□ 0.49
SUDS3-203ENST00000541591 SEC31BQ9NQW1 1179 aa18.1■□□□□ 0.49
SUDS3-203ENST00000541591 MAP3K2Q9Y2U5 619 aa18.1■□□□□ 0.49
SUDS3-203ENST00000541591 PASKQ96RG2 1323 aa18.09■□□□□ 0.49
SUDS3-203ENST00000541591 RIMBP2O15034 1052 aa18.09■□□□□ 0.49
SUDS3-203ENST00000541591 RAD17O75943 681 aa18.09■□□□□ 0.49
SUDS3-203ENST00000541591 LMOD1P29536 600 aaPredicted RBP18.09■□□□□ 0.49
SUDS3-203ENST00000541591 CCDC30Q5VVM6 783 aa18.09■□□□□ 0.49
SUDS3-203ENST00000541591 JMYQ8N9B5 988 aa18.09■□□□□ 0.49
SUDS3-203ENST00000541591 SHTN1A0MZ66 631 aa18.08■□□□□ 0.48
SUDS3-203ENST00000541591 ITGBL1O95965 494 aaPredicted RBP18.08■□□□□ 0.48
SUDS3-203ENST00000541591 GPSM2P81274 684 aa18.08■□□□□ 0.48
SUDS3-203ENST00000541591 CXCL9Q07325 125 aa18.08■□□□□ 0.48
SUDS3-203ENST00000541591 TWISTNBQ3B726 338 aaPredicted RBP18.08■□□□□ 0.48
SUDS3-203ENST00000541591 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
SUDS3-203ENST00000541591 YDJCA8MPS7 323 aa18.07■□□□□ 0.48
SUDS3-203ENST00000541591 SF3B3Q15393 1217 aaKnown RBP18.07■□□□□ 0.48
SUDS3-203ENST00000541591 GRIPAP1Q4V328 841 aa18.07■□□□□ 0.48
SUDS3-203ENST00000541591 FAM9BQ8IZU0 186 aa18.07■□□□□ 0.48
SUDS3-203ENST00000541591 SUPT20HQ8NEM7 779 aa18.07■□□□□ 0.48
SUDS3-203ENST00000541591 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
SUDS3-203ENST00000541591 RTFDC1Q9BY42 306 aaPredicted RBP18.07■□□□□ 0.48
SUDS3-203ENST00000541591 DBNDD1Q9H9R9 158 aa18.07■□□□□ 0.48
SUDS3-203ENST00000541591 CWC25Q9NXE8 425 aaPredicted RBP18.07■□□□□ 0.48
SUDS3-203ENST00000541591 NSFL1CQ9UNZ2 370 aaKnown RBP18.07■□□□□ 0.48
SUDS3-203ENST00000541591 PI4KAP2A4QPH2 592 aa18.06■□□□□ 0.48
SUDS3-203ENST00000541591 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
SUDS3-203ENST00000541591 KIAA2012Q0VF49 1180 aa18.06■□□□□ 0.48
SUDS3-203ENST00000541591 CWF19L2Q2TBE0 894 aaKnown RBP18.06■□□□□ 0.48
SUDS3-203ENST00000541591 CNTROBQ8N137 903 aa18.06■□□□□ 0.48
SUDS3-203ENST00000541591 PI4KAP1Q8N8J0 262 aa18.06■□□□□ 0.48
SUDS3-203ENST00000541591 ZBTB38Q8NAP3 1195 aaPredicted RBP18.06■□□□□ 0.48
SUDS3-203ENST00000541591 CREBZFQ9NS37 354 aa18.06■□□□□ 0.48
SUDS3-203ENST00000541591 ZNRF3Q9ULT6 936 aa18.06■□□□□ 0.48
SUDS3-203ENST00000541591 C6orf229H3BNL8 230 aa18.05■□□□□ 0.48
SUDS3-203ENST00000541591 HSPA1AP0DMV8 641 aaKnown RBP18.05■□□□□ 0.48
SUDS3-203ENST00000541591 HSPA1BP0DMV9 641 aaKnown RBP18.05■□□□□ 0.48
SUDS3-203ENST00000541591 TRIM28Q13263 835 aaKnown RBP18.05■□□□□ 0.48
SUDS3-203ENST00000541591 DOK7Q18PE1 504 aa18.05■□□□□ 0.48
SUDS3-203ENST00000541591 CCDC27Q2M243 656 aa18.05■□□□□ 0.48
SUDS3-203ENST00000541591 PNMA8AQ86V59 439 aaPredicted RBP18.05■□□□□ 0.48
SUDS3-203ENST00000541591 STK31Q9BXU1 1019 aa18.05■□□□□ 0.48
SUDS3-203ENST00000541591 POLLQ9UGP5 575 aa18.05■□□□□ 0.48
SUDS3-203ENST00000541591 TRAF5O00463 557 aa18.04■□□□□ 0.48
SUDS3-203ENST00000541591 DDX58O95786 925 aaKnown RBP18.04■□□□□ 0.48
SUDS3-203ENST00000541591 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
SUDS3-203ENST00000541591 CIAPIN1Q6FI81 312 aa18.04■□□□□ 0.48
SUDS3-203ENST00000541591 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
SUDS3-203ENST00000541591 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
SUDS3-203ENST00000541591 PCCAP05165 728 aaPredicted RBP18.03■□□□□ 0.48
SUDS3-203ENST00000541591 IFFO2Q5TF58 517 aa18.03■□□□□ 0.48
SUDS3-203ENST00000541591 KSR2Q6VAB6 950 aa18.03■□□□□ 0.48
SUDS3-203ENST00000541591 CCDC191Q8NCU4 936 aa18.03■□□□□ 0.48
SUDS3-203ENST00000541591 BCL2L13Q9BXK5 485 aa18.03■□□□□ 0.48
SUDS3-203ENST00000541591 KCNQ5Q9NR82 932 aa18.03■□□□□ 0.48
SUDS3-203ENST00000541591 GPRC5DQ9NZD1 345 aa18.03■□□□□ 0.48
SUDS3-203ENST00000541591 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
SUDS3-203ENST00000541591 CNTNAP1P78357 1384 aa18.03■□□□□ 0.48
SUDS3-203ENST00000541591 TMEM88BA6NKF7 163 aa18.02■□□□□ 0.48
SUDS3-203ENST00000541591 PDE8AO60658 829 aa18.02■□□□□ 0.48
SUDS3-203ENST00000541591 RPS8P62241 208 aaKnown RBP18.02■□□□□ 0.48
SUDS3-203ENST00000541591 EXOSC9Q06265 439 aaKnown RBP18.02■□□□□ 0.48
SUDS3-203ENST00000541591 WASHC4Q2M389 1173 aa18.02■□□□□ 0.48
SUDS3-203ENST00000541591 COL13A1Q5TAT6 717 aaPredicted RBP18.02■□□□□ 0.48
SUDS3-203ENST00000541591 TRPM4Q8TD43 1214 aa18.02■□□□□ 0.48
SUDS3-203ENST00000541591 IL16Q14005 1332 aa18■□□□□ 0.47
SUDS3-203ENST00000541591 WTIPA6NIX2 430 aaPredicted RBP18■□□□□ 0.47
SUDS3-203ENST00000541591 PSMD14O00487 310 aa18■□□□□ 0.47
SUDS3-203ENST00000541591 ECE2O60344 883 aa18■□□□□ 0.47
SUDS3-203ENST00000541591 UFL1O94874 794 aa18■□□□□ 0.47
SUDS3-203ENST00000541591 CCDC152Q4G0S7 254 aa18■□□□□ 0.47
SUDS3-203ENST00000541591 TMC4Q7Z404 712 aa18■□□□□ 0.47
SUDS3-203ENST00000541591 TBC1D16Q8TBP0 767 aa18■□□□□ 0.47
SUDS3-203ENST00000541591 ADARB2Q9NS39 739 aaKnown RBP18■□□□□ 0.47
SUDS3-203ENST00000541591 ABT1Q9ULW3 272 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms