RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 NEK4P51957 841 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 CCDC144BQ3MJ40 725 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 HDGFL1Q5TGJ6 251 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 CCDC144CPQ8IYA2 1237 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 ZKSCAN4Q969J2 545 aaPredicted RBP8.61□□□□□ -1.03
PPME1-206ENST00000541340 EPC1Q9H2F5 836 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 ARHGEF12Q9NZN5 1544 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.61□□□□□ -1.03
PPME1-206ENST00000541340 DISP1Q96F81 1524 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 PPIP5K1Q6PFW1 1433 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 IMPDH2P12268 514 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 DDR1Q08345 913 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 PREPLQ4J6C6 727 aaPredicted RBP8.61□□□□□ -1.03
PPME1-206ENST00000541340 CCDC183Q5T5S1 534 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 CACTINQ8WUQ7 758 aaKnown RBP8.61□□□□□ -1.03
PPME1-206ENST00000541340 YIPF2Q9BWQ6 316 aa8.61□□□□□ -1.03
PPME1-206ENST00000541340 RBM47A0AV96 593 aaKnown RBP8.6□□□□□ -1.03
PPME1-206ENST00000541340 CDKL5O76039 1030 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 NUTM1Q86Y26 1132 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.6□□□□□ -1.031e-9■■■■□ 19.6
PPME1-206ENST00000541340 FUCA2Q9BTY2 467 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 FIBPO43427 364 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 PYGBP11216 843 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 TBC1D5Q92609 795 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 MRFAP1L1Q96HT8 127 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 NAT1P18440 290 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 PDIA5Q14554 519 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 CCDC93Q567U6 631 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 PLEKHG4BQ96PX9 1271 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 CD248Q9HCU0 757 aa8.6□□□□□ -1.03
PPME1-206ENST00000541340 CFAP74Q9C0B2 1584 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 FRMD3A2A2Y4 597 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 PRPHP41219 470 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 CAMK4Q16566 473 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 CC2D1AQ6P1N0 951 aaPredicted RBP8.59□□□□□ -1.03
PPME1-206ENST00000541340 DRC7Q8IY82 874 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 UPF3BQ9BZI7 483 aaKnown RBP8.59□□□□□ -1.03
PPME1-206ENST00000541340 TMX4Q9H1E5 349 aaPredicted RBP8.59□□□□□ -1.03
PPME1-206ENST00000541340 VPS18Q9P253 973 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 ANKRD50Q9ULJ7 1429 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 ZSCAN9O15535 394 aaPredicted RBP8.59□□□□□ -1.03
PPME1-206ENST00000541340 CAPN15O75808 1086 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 LZTS2Q9BRK4 669 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 PALD1Q9ULE6 856 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 AKAP2Q9Y2D5 859 aa8.59□□□□□ -1.03
PPME1-206ENST00000541340 SCAF11Q99590 1463 aaKnown RBP8.59□□□□□ -1.03
PPME1-206ENST00000541340 EXOC5O00471 708 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 ST18O60284 1047 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 PPFIA4O75335 1185 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 FCHSD2O94868 740 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 ALDH1B1P30837 517 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 PDE6BP35913 854 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 PEX19P40855 299 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 USP4Q13107 963 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 RASA3Q14644 834 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 IQCA1Q86XH1 822 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 SDR16C5Q8N3Y7 309 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 SRCIN1Q9C0H9 1055 aa8.59□□□□□ -1.04
PPME1-206ENST00000541340 LMTK3Q96Q04 1460 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 TMCO5BA8MYB1 307 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 MX1P20591 662 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 RDXP35241 583 aaKnown RBP8.58□□□□□ -1.04
PPME1-206ENST00000541340 DHX8Q14562 1220 aaKnown RBP8.58□□□□□ -1.04
PPME1-206ENST00000541340 EXOC8Q8IYI6 725 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 FUT8Q9BYC5 575 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 FAM107BQ9H098 131 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 LTBP4Q8N2S1 1624 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 ATP10AO60312 1499 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 YEATS2Q9ULM3 1422 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 PLEKHM2Q8IWE5 1019 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 RBM12BQ8IXT5 1001 aaKnown RBP8.58□□□□□ -1.04
PPME1-206ENST00000541340 CABS1Q96KC9 395 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 TMEM165Q9HC07 324 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 ASXL1Q8IXJ9 1541 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 A0A1B0GUA9 196 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 ERC2O15083 957 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 GNAI1P63096 354 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 WLSQ5T9L3 541 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 TSHZ3Q63HK5 1081 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 CDCA2Q69YH5 1023 aaPredicted RBP8.58□□□□□ -1.04
PPME1-206ENST00000541340 SPDYE1Q8NFV5 336 aaPredicted RBP8.58□□□□□ -1.04
PPME1-206ENST00000541340 UBXN4Q92575 508 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 DDX11Q96FC9 970 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 SUN2Q9UH99 717 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 NUB1Q9Y5A7 615 aa8.58□□□□□ -1.04
PPME1-206ENST00000541340 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.58□□□□□ -1.042e-7■□□□□ 11.2
PPME1-206ENST00000541340 CHUKO15111 745 aa8.57□□□□□ -1.04
PPME1-206ENST00000541340 CLNS1AP54105 237 aaKnown RBP8.57□□□□□ -1.04
PPME1-206ENST00000541340 CCDC178Q5BJE1 867 aa8.57□□□□□ -1.04
PPME1-206ENST00000541340 KIRREL3Q8IZU9 778 aa8.57□□□□□ -1.04
PPME1-206ENST00000541340 A2MP01023 1474 aa8.57□□□□□ -1.04
PPME1-206ENST00000541340 FMNL1O95466 1100 aaPredicted RBP8.57□□□□□ -1.04
PPME1-206ENST00000541340 FAM177A1Q8N128 213 aaPredicted RBP8.57□□□□□ -1.04
PPME1-206ENST00000541340 RUNDC1Q96C34 613 aa8.57□□□□□ -1.04
PPME1-206ENST00000541340 CFDP1Q9UEE9 299 aaPredicted RBP8.57□□□□□ -1.04
PPME1-206ENST00000541340 ADGRL2O95490 1459 aa8.57□□□□□ -1.04
PPME1-206ENST00000541340 GORABQ5T7V8 394 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms